Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0274500-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:9526187:9526984:1 gene:Os01g0274500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 11 description:Similar to Expansin-A11. (Os01t0274500-00)
Sequence	ATGGCCGCGGAGGTCGCCGCCGGCGGCGACTCCGGCTGGAGCAGCGGCAGCGCGACGTTC TACGGCGGCAGCGACGCGTCGGGGACGATGGGTGGCGCGTGCGGGTACGGCAACCTGTAC AGCGCCGGGTACGGGACGAGCACGGCGGCGCTGAGCACGGCGCTGTTCAACAACGGGCAG AGCTGCGGCGCGTGCTTCGAGGTCCGGTGCGGCGGCGGCGGCAGCTGCCTCGCCGGCACC GTGGCGGTGACGGCCACCAACCTCTGCCCGCCCAACTACGCGCTCGCCGGCGACGCCGGC GGGTGGTGCAACCCGCCGCGGCCGCACTTCGACATGGCGGAGCCGGCGTTCACCAGGATC GCGCAGGCCCGCGCCGGCGTGGTGCCGGTGCAGTACCGGCGCGTGGCGTGCGCGAAGCAG GGCGGCATCCGGTTCACCATCACCGGCCACTCCTACTTCAACCTGGTGCTCGTCACCAAC GTCGGCGGCGCCGGCGACGTGACGGCGGTGTCGGTGAAGGGGTCGCGGTCGGGGTGGCAG GCCATGAGCCACAACTGGGGCGCCAACTGGCAGAACGGCGCCAACCTCGACGGCCAGCCG CTCTCCTTCAGGGTCACCGCCAGCGACGGCCGCACCGTCACCTCCGACAACGTCGCCCCC TCCGGCTGGTCCTTCGGCCAGACCTTCTCCGGCGGCCAGTTCTAG

Peptide Sequence

PEP ID	Os01t0274500-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:9526187:9526984:1 gene:Os01g0274500 transcript:Os01t0274500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 11 description:Similar to Expansin-A11. (Os01t0274500-00)
Sequence	MAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQ SCGACFEVRCGGGGSCLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRI AQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQ AMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF

Transcript Sequence

Transcript ID	Os01t0274500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9526187:9526984:1 gene:Os01g0274500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 11 description:Similar to Expansin-A11. (Os01t0274500-00)
Sequence	CTACGCTTGCTAGCTGTTGCCGCCGTGGCCGCGATGGCCGCGGAGGTCGCCGCCGGCGGC GACTCCGGCTGGAGCAGCGGCAGCGCGACGTTCTACGGCGGCAGCGACGCGTCGGGGACG ATGGGTGGCGCGTGCGGGTACGGCAACCTGTACAGCGCCGGGTACGGGACGAGCACGGCG GCGCTGAGCACGGCGCTGTTCAACAACGGGCAGAGCTGCGGCGCGTGCTTCGAGGTCCGG TGCGGCGGCGGCGGCAGCTGCCTCGCCGGCACCGTGGCGGTGACGGCCACCAACCTCTGC CCGCCCAACTACGCGCTCGCCGGCGACGCCGGCGGGTGGTGCAACCCGCCGCGGCCGCAC TTCGACATGGCGGAGCCGGCGTTCACCAGGATCGCGCAGGCCCGCGCCGGCGTGGTGCCG GTGCAGTACCGGCGCGTGGCGTGCGCGAAGCAGGGCGGCATCCGGTTCACCATCACCGGC CACTCCTACTTCAACCTGGTGCTCGTCACCAACGTCGGCGGCGCCGGCGACGTGACGGCG GTGTCGGTGAAGGGGTCGCGGTCGGGGTGGCAGGCCATGAGCCACAACTGGGGCGCCAAC TGGCAGAACGGCGCCAACCTCGACGGCCAGCCGCTCTCCTTCAGGGTCACCGCCAGCGAC GGCCGCACCGTCACCTCCGACAACGTCGCCCCCTCCGGCTGGTCCTTCGGCCAGACCTTC TCCGGCGGCCAGTTCTAGCCGTTCCGCCGTCGATCGCCGGAGGAATTGAAGGGGCTCTGT TTTGAAGAAGCTCCAAAC