Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0272600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:9424556:9429189:1 gene:Os01g0272600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Root determined nodulation 1. (Os01t0272600-01)
Sequence	ATGAACGCGGCGGCGCGGAAGGCCGCCGCCGCGGCGCGGCTGCCGGCGGCGGTGCTGGTG GTGGTAGCGGTGGGGGCGTTCCTGATCTCCTACAACCTCCTGGCCATCGTGCTCCGGGGT GGCGGCGGCGCGGCCACCGGGGCGGGGAGGGAGAGGGACCCGGTGGTGGCGATGCCGGGG TGGATGCGGGCGGCTGGGTCGGCGGGCGGGGGGCGGCGGCGGCCGTTCCACGTGGCGCTC ACGGCGACCGACGCCGCGTACAGCCGGTGGCAGTGCCGGGTGATGTACTACTGGTACAAG CGGATGCAGGCGCGGCCGGAGGGCGCCGACATGGGAGGCTTCACCCGCGTGCTCCACTCC GGGAAGCCCGACGCCCTCATGGGCGAGATCCCCACCTTCGTCGTCGACCCCCTCCCCGCC GGCAAGGACCATGGCTATGTCGTACTAAATAGGCCCTGGGCATTTGTACAGTGGCTGGAG AAAGCAAAGATTGAAGAAGAATACATATTGATGGCAGAACCAGATCATATATTTGTGAGA CCTTTACCAAATTTAGCCCGCGATGATCCAGCAGCATTCCCTTTCTTTTACATTACACCA TCAGAACATGAAAGTGTTCTCAGGAAATATTATCCTAAAGAAAGAGGCCCTGTCACAAAT ATCGACCCTATTGGGAATTCCCCTGTAATCATTAAGAAGATACAACTTGAGAAGATTGCC CCTACATGGATGAATGTATCGATTCAAATGAAAGAAGATCAGGAGACAGATAAAGCTTTT GGATGGGTCTTGGAAATGTATGCATATGCTGTTGCTAGTGCACTCCATGGGGTTCAACAT ATCCTTCGAAAAGATTTCATGATTCAGCCACCTTTTGATACCAAACTTGGGAATACATTT ATTATCCACTTCACTTACGGATGTGACTATACACTCAAGGGTGTACTAACCTATGGAAAA ATTGGTGAATGGAGATTTGACAAGAGAGCATACCAAGACAGGCCACCGCCACGAAATCTT ACATTGCCCCCTCCAGGAGTACCAGAAAGTGTGGTTACACTTGTAAAGATGGTAAACGAG GCTACCGCAAACCTTCCAGGGTGGGATGATGGAAGATAG

Peptide Sequence

PEP ID	Os01t0272600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:9424556:9429189:1 gene:Os01g0272600 transcript:Os01t0272600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Root determined nodulation 1. (Os01t0272600-01)
Sequence	MNAAARKAAAAARLPAAVLVVVAVGAFLISYNLLAIVLRGGGGAATGAGRERDPVVAMPG WMRAAGSAGGGRRRPFHVALTATDAAYSRWQCRVMYYWYKRMQARPEGADMGGFTRVLHS GKPDALMGEIPTFVVDPLPAGKDHGYVVLNRPWAFVQWLEKAKIEEEYILMAEPDHIFVR PLPNLARDDPAAFPFFYITPSEHESVLRKYYPKERGPVTNIDPIGNSPVIIKKIQLEKIA PTWMNVSIQMKEDQETDKAFGWVLEMYAYAVASALHGVQHILRKDFMIQPPFDTKLGNTF IIHFTYGCDYTLKGVLTYGKIGEWRFDKRAYQDRPPPRNLTLPPPGVPESVVTLVKMVNE ATANLPGWDDGR

Transcript Sequence

Transcript ID	Os01t0272600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9424556:9429189:1 gene:Os01g0272600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Root determined nodulation 1. (Os01t0272600-01)
Sequence	GTTAATTATTCGCTTCCCTCGCAAGGGAGGAGGAGACGCGCCGCCCCTCGAATCCAAACC CCCAAAATTCCCAGAGAGATGAACGCGGCGGCGCGGAAGGCCGCCGCCGCGGCGCGGCTG CCGGCGGCGGTGCTGGTGGTGGTAGCGGTGGGGGCGTTCCTGATCTCCTACAACCTCCTG GCCATCGTGCTCCGGGGTGGCGGCGGCGCGGCCACCGGGGCGGGGAGGGAGAGGGACCCG GTGGTGGCGATGCCGGGGTGGATGCGGGCGGCTGGGTCGGCGGGCGGGGGGCGGCGGCGG CCGTTCCACGTGGCGCTCACGGCGACCGACGCCGCGTACAGCCGGTGGCAGTGCCGGGTG ATGTACTACTGGTACAAGCGGATGCAGGCGCGGCCGGAGGGCGCCGACATGGGAGGCTTC ACCCGCGTGCTCCACTCCGGGAAGCCCGACGCCCTCATGGGCGAGATCCCCACCTTCGTC GTCGACCCCCTCCCCGCCGGCAAGGACCATGGCTATGTCGTACTAAATAGGCCCTGGGCA TTTGTACAGTGGCTGGAGAAAGCAAAGATTGAAGAAGAATACATATTGATGGCAGAACCA GATCATATATTTGTGAGACCTTTACCAAATTTAGCCCGCGATGATCCAGCAGCATTCCCT TTCTTTTACATTACACCATCAGAACATGAAAGTGTTCTCAGGAAATATTATCCTAAAGAA AGAGGCCCTGTCACAAATATCGACCCTATTGGGAATTCCCCTGTAATCATTAAGAAGATA CAACTTGAGAAGATTGCCCCTACATGGATGAATGTATCGATTCAAATGAAAGAAGATCAG GAGACAGATAAAGCTTTTGGATGGGTCTTGGAAATGTATGCATATGCTGTTGCTAGTGCA CTCCATGGGGTTCAACATATCCTTCGAAAAGATTTCATGATTCAGCCACCTTTTGATACC AAACTTGGGAATACATTTATTATCCACTTCACTTACGGATGTGACTATACACTCAAGGGT GTACTAACCTATGGAAAAATTGGTGAATGGAGATTTGACAAGAGAGCATACCAAGACAGG CCACCGCCACGAAATCTTACATTGCCCCCTCCAGGAGTACCAGAAAGTGTGGTTACACTT GTAAAGATGGTAAACGAGGCTACCGCAAACCTTCCAGGGTGGGATGATGGAAGATAGACT ATGACGACAAATGTTGCTGATTAGTGATTACTCATTCTGATAGCTGCCCCATTCCTCTCT ATTCAGGGGCAATACACCATAAATGATAGAAATCGATAGTTTTCCCAGTATACTTACAGA AAGAAAACAAGATAGCAGCCCAAAAGTTTTTTTGATGAAATTATATCGAAATGCTACTAG TATAAACACCTAAAGTATAGTTATGCCAGTAAAATGGTGATTGCACCTCTGACATCTCTA TAGAGTTACTGAGCATATGTTGATCTGTTGTCCAATTGTTTGTTCGAACTATACCGCTGT GTAAATAGTGAACTGTAGCTTATTGGCATGCAAACAATGTTTGCGAATGCCAAAGTTAAA TATCGCCTATATAATGTCAATAAAATACAATGGTTTAGTCGTTCGTTTTGC