Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0269000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:9268690:9272912:-1 gene:Os01g0269000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydroxymethylglutaryl-CoA lyase. (Os01t0269000-01)
Sequence	ATGCTGGCGTCAAAGCTCTGGTCGAGGCTCGCGTCGCCGTCTTCCCCCGCCTCGCCGCGC GCCCTTTCTTCTTCTTCATCGGCGGCGGCGGCGGCGAGGTACCTACTGCCGAGCTCTGGG ATGCCGGCCCAAGAAAGGTCGCCGGGTCACCCCAGTGGCGGCGACGCGCGGCCCGGTGCG GGGCTCGGGCTCGCCGAGACTGGGTGTGGCGCGGCCGGTGCGCCGCGACCGCTGCCGCTG CCGTGCTCTTCTTCGTCGGACAATCCCGCGGAAGAGAATCCTTGCACAAGACAGATATAC CAAAGACAGCTAATGCCGCATCGGTTCAAGTTATTTTTGGGGGAGAAACGTCATTTTACA TATGCAAATGGTGCTTCACTGAATCCGCAGAACTACAGATATTTTTCATCTTCTTCTGGC CAACAGAGTATAGGAATTGGTAACAAGATTATACATGACCTTCCAAGAAGTGTGAAAATT GTGGAAGTTGGGCCACGAGATGGGCTACAGAATGAGAAGAACATAGTTCCAACACATGTA AAGATTGAACTCATACAGAGACTGGCAACCTCTGGATTATCGGTTGTTGAGGCAACTAGT TTTGTCTCTCCAAAATGGGTACCACAGCTAGCTGATGCTAAGGATGTGATGGATGTAGTC CGGAATATTGAAGGTGTAAGCCTTCCTGTATTGACACCAAACCTTAAGGGATTTGAGGCA GCTGTTGCAGCAGGTGCAAAAGAAGTTGCAGTATTTGCGTCAGCTTCTGAAGCATTTTCC AAGTCAAACATAAACTGTACCATTAAAGAGAGCCTTGCTCGCTATAAAGATGTTGCTCTT GCAGCAAAAGAGCTAAAAATCCCCATGCGAGGGTATGTTTCTTGTGTGGTTGGATGCCCA GTAGAAGGATATGTGCCACCGTCAAATGTAGCTCATGTGGCTAAAGAGCTTTATGACATG GGCTGCTACGAGGTTTCACTTGGTGATACAATAGGCGTTGGTACCCCAGGCACCGTTGTT CCAATGCTTGAGGCTGTTATGTTCTTTGTTCCAAAGGAGAAGCTTGCTGTCCATTTCCAC GATACCTACGGCCAATCGCTTTCAAATATCCTCATCTCTCTCCAGATGGGTGTGAGCGTT GTGGACTCTTCCGTAGCGGGCCTCGGAGGGTGCCCATACGCGAAAGGTGCATCGGGCAAT GTGGCGACGGAGGACGTGGTGTACATGCTGAACGGGCTGGGGATCAGCACCAATGTCGAC CTGGGCAAGGTGATGGCCGCCGGCGAGTTCATCTGCAACCATCTGGGGCGCCAGTCTGGG TCCAAGGCAGCTATCGCTTTGGGAAGCAAGGTTGCTACTGCCAACGCATCCAAACTGTGA

Peptide Sequence

PEP ID	Os01t0269000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:9268690:9272912:-1 gene:Os01g0269000 transcript:Os01t0269000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydroxymethylglutaryl-CoA lyase. (Os01t0269000-01)
Sequence	MLASKLWSRLASPSSPASPRALSSSSSAAAAARYLLPSSGMPAQERSPGHPSGGDARPGA GLGLAETGCGAAGAPRPLPLPCSSSSDNPAEENPCTRQIYQRQLMPHRFKLFLGEKRHFT YANGASLNPQNYRYFSSSSGQQSIGIGNKIIHDLPRSVKIVEVGPRDGLQNEKNIVPTHV KIELIQRLATSGLSVVEATSFVSPKWVPQLADAKDVMDVVRNIEGVSLPVLTPNLKGFEA AVAAGAKEVAVFASASEAFSKSNINCTIKESLARYKDVALAAKELKIPMRGYVSCVVGCP VEGYVPPSNVAHVAKELYDMGCYEVSLGDTIGVGTPGTVVPMLEAVMFFVPKEKLAVHFH DTYGQSLSNILISLQMGVSVVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGISTNVD LGKVMAAGEFICNHLGRQSGSKAAIALGSKVATANASKL

Transcript Sequence

Transcript ID	Os01t0269000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9268690:9272912:-1 gene:Os01g0269000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydroxymethylglutaryl-CoA lyase. (Os01t0269000-01)
Sequence	GAGAGAGAGAGAAGAGAAGAGAAGCGCGCAGTGTCCAGACGCAACCGATCAGTCTCGCTT CTCGCCTCGTCTCGTCTCCTTCCTCCGACGCGCGGAACCTTCTAGAAGCTTCTCCCTCCG GTCGGGGGATGCCGCGCTGACCCCCTACCGTGGTTATGCTGGCGTCAAAGCTCTGGTCGA GGCTCGCGTCGCCGTCTTCCCCCGCCTCGCCGCGCGCCCTTTCTTCTTCTTCATCGGCGG CGGCGGCGGCGAGGTACCTACTGCCGAGCTCTGGGATGCCGGCCCAAGAAAGGTCGCCGG GTCACCCCAGTGGCGGCGACGCGCGGCCCGGTGCGGGGCTCGGGCTCGCCGAGACTGGGT GTGGCGCGGCCGGTGCGCCGCGACCGCTGCCGCTGCCGTGCTCTTCTTCGTCGGACAATC CCGCGGAAGAGAATCCTTGCACAAGACAGATATACCAAAGACAGCTAATGCCGCATCGGT TCAAGTTATTTTTGGGGGAGAAACGTCATTTTACATATGCAAATGGTGCTTCACTGAATC CGCAGAACTACAGATATTTTTCATCTTCTTCTGGCCAACAGAGTATAGGAATTGGTAACA AGATTATACATGACCTTCCAAGAAGTGTGAAAATTGTGGAAGTTGGGCCACGAGATGGGC TACAGAATGAGAAGAACATAGTTCCAACACATGTAAAGATTGAACTCATACAGAGACTGG CAACCTCTGGATTATCGGTTGTTGAGGCAACTAGTTTTGTCTCTCCAAAATGGGTACCAC AGCTAGCTGATGCTAAGGATGTGATGGATGTAGTCCGGAATATTGAAGGTGTAAGCCTTC CTGTATTGACACCAAACCTTAAGGGATTTGAGGCAGCTGTTGCAGCAGGTGCAAAAGAAG TTGCAGTATTTGCGTCAGCTTCTGAAGCATTTTCCAAGTCAAACATAAACTGTACCATTA AAGAGAGCCTTGCTCGCTATAAAGATGTTGCTCTTGCAGCAAAAGAGCTAAAAATCCCCA TGCGAGGGTATGTTTCTTGTGTGGTTGGATGCCCAGTAGAAGGATATGTGCCACCGTCAA ATGTAGCTCATGTGGCTAAAGAGCTTTATGACATGGGCTGCTACGAGGTTTCACTTGGTG ATACAATAGGCGTTGGTACCCCAGGCACCGTTGTTCCAATGCTTGAGGCTGTTATGTTCT TTGTTCCAAAGGAGAAGCTTGCTGTCCATTTCCACGATACCTACGGCCAATCGCTTTCAA ATATCCTCATCTCTCTCCAGATGGGTGTGAGCGTTGTGGACTCTTCCGTAGCGGGCCTCG GAGGGTGCCCATACGCGAAAGGTGCATCGGGCAATGTGGCGACGGAGGACGTGGTGTACA TGCTGAACGGGCTGGGGATCAGCACCAATGTCGACCTGGGCAAGGTGATGGCCGCCGGCG AGTTCATCTGCAACCATCTGGGGCGCCAGTCTGGGTCCAAGGCAGCTATCGCTTTGGGAA GCAAGGTTGCTACTGCCAACGCATCCAAACTGTGAGGTTCACTAACATTCACTGATGCAG TCTTTCGGAGGATGCGTTTCAGACATACAAATGTATACGATAAATAAAGGCGAAATTGGT TCCATGCTATTCAAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCGTT GGGTGATGTAAGATCAATTTTGCCAGAAATAAATGGACTGATGGGATTGTTGATTG