Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0268800-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:9259171:9264216:1 gene:Os01g0268800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 2, RHOMBOID 2 description:Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote domain containing protein. (Os01t0268800-01);Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote domain containing protein. (Os01t0268800-02)
Sequence	ATGCAGGGCGGCGTGTCCGGATTCCAGAACGCGCCGGTGACGCGGGCCGTCGTCCTCGCC AGCGGCCTCCTCTCCGTCGTCTTCAGCGCCCAGCGCCGCGCCCGCGCCCTCGTCCTCTCC CACCAGGGGATTGTCAAAAACTTCCGTCTATGGAAGTTGTTTGCATCTGGGTTTGCCTTT CAGTCAACACCGGAGCTATTGTTTGGAGTCTACCTGCTCTATTACTTCCGTGTTTTCGAG AGGCAGATAGGCTCTAACAAATACTCGGTTTTTAGTTTATTCACTATCTCAGTATCATTG CTTCTTGAGATCCTATCTTTGGTTCTCCTGAAAGACACCAACTACCTCAGCACTCTTGCA TGTGGACCTTATGGCCTTATATTTGCCTCATTCATTCCATTCTTTCTTGACATTCCTGTC ACATCACGATTTCGTATTTTTGGTGTTAACTTCAGTGATAAATCATTCATATACCTAGCT GGCCTGCAGCTGCTTTTATCTTCTGGGAAGCGTTCTCTTATTCCTGGTATTTGTGGTCTG ATTGCTGGTTCTCTCTATCGTCTGAACGTGCTTGGCATCCGCAGGATGAAGATGCCACAG GTTATTGCATCATTTTTCGCAAGAATTTTCGCACCTTCTTCGGGAGGTTCATCTAGGCCC TCCAGGAGTCTGGTCGGAAACATGAGTTCTCGTACAAGCCGTGCTGTGCAGAACAATCAG CCATCTGGATTCGCTCCTGTCGTGGAGCCCCCAGAATCTTCAATCGCTATGCTGGTTTCG ATGGGCTTTGATGGAAATGCTGCAAGACAGGCGCTAATGCGAGCCAGAAATGACATCAAC ACGGCCACGAACATCCTCCTTGAAGCGCAGACTCGTTGA

Peptide Sequence

PEP ID	Os01t0268800-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:9259171:9264216:1 gene:Os01g0268800 transcript:Os01t0268800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 2, RHOMBOID 2 description:Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote domain containing protein. (Os01t0268800-01);Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote domain containing protein. (Os01t0268800-02)
Sequence	MQGGVSGFQNAPVTRAVVLASGLLSVVFSAQRRARALVLSHQGIVKNFRLWKLFASGFAF QSTPELLFGVYLLYYFRVFERQIGSNKYSVFSLFTISVSLLLEILSLVLLKDTNYLSTLA CGPYGLIFASFIPFFLDIPVTSRFRIFGVNFSDKSFIYLAGLQLLLSSGKRSLIPGICGL IAGSLYRLNVLGIRRMKMPQVIASFFARIFAPSSGGSSRPSRSLVGNMSSRTSRAVQNNQ PSGFAPVVEPPESSIAMLVSMGFDGNAARQALMRARNDINTATNILLEAQTR

Transcript Sequence

Transcript ID	Os01t0268800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9259171:9264216:1 gene:Os01g0268800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 2, RHOMBOID 2 description:Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote domain containing protein. (Os01t0268800-01);Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote domain containing protein. (Os01t0268800-02)
Sequence	GCCACGCCTCATCTGACTCTTCTTCCCCCTTCCTCCCTCCCGAGCTCCGCCCGCCCGCCC GCCGCCGCCGCCGTCGAGTTCGCCGCACCTCTCGCACGGCCCCCACCCCGCGCTTCCTTC CTCGTCGGACCGCCCGCGACCGCGAGCCTGCCTCCCGTCCAAGTTGACGGGAACCCTCGC CGCGGAAGACCGCGGAGAGGTGGGGGGCCGCGTCCCGACCCCGGCGGTGGTCGATCGGTT CCGGACGAGAGGAGCGATGCAGGGCGGCGTGTCCGGATTCCAGAACGCGCCGGTGACGCG GGCCGTCGTCCTCGCCAGCGGCCTCCTCTCCGTCGTCTTCAGCGCCCAGCGCCGCGCCCG CGCCCTCGTCCTCTCCCACCAGGGGATTGTCAAAAACTTCCGTCTATGGAAGTTGTTTGC ATCTGGGTTTGCCTTTCAGTCAACACCGGAGCTATTGTTTGGAGTCTACCTGCTCTATTA CTTCCGTGTTTTCGAGAGGCAGATAGGCTCTAACAAATACTCGGTTTTTAGTTTATTCAC TATCTCAGTATCATTGCTTCTTGAGATCCTATCTTTGGTTCTCCTGAAAGACACCAACTA CCTCAGCACTCTTGCATGTGGACCTTATGGCCTTATATTTGCCTCATTCATTCCATTCTT TCTTGACATTCCTGTCACATCACGATTTCGTATTTTTGGTGTTAACTTCAGTGATAAATC ATTCATATACCTAGCTGGCCTGCAGCTGCTTTTATCTTCTGGGAAGCGTTCTCTTATTCC TGGTATTTGTGGTCTGATTGCTGGTTCTCTCTATCGTCTGAACGTGCTTGGCATCCGCAG GATGAAGATGCCACAGGTTATTGCATCATTTTTCGCAAGAATTTTCGCACCTTCTTCGGG AGGTTCATCTAGGCCCTCCAGGAGTCTGGTCGGAAACATGAGTTCTCGTACAAGCCGTGC TGTGCAGAACAATCAGCCATCTGGATTCGCTCCTGTCGTGGAGCCCCCAGAATCTTCAAT CGCTATGCTGGTTTCGATGGGCTTTGATGGAAATGCTGCAAGACAGGCGCTAATGCGAGC CAGAAATGACATCAACACGGCCACGAACATCCTCCTTGAAGCGCAGACTCGTTGAGCTAA CTTAATGCGACTTCCCTGGAAACATTGCGGGCAGAATTGGTGATATTTCTAAGATGAGGC AACATGCTGAGGTCCATTAGGCAGCAGATTGGCGACGAAATGGTGCGCTGCTAATTTTAT TCACTTGCCACTGGTACCATGATTTGATGAGAAGTTCCACTCGGCTCTTGCTAGCTGTCA GGCGTCTGCTTAGGAAGTCAGCAAACATTTGCCGTAGTTAACGGGTTATCTATGTCAATA TTTAAATTTCTCTCACCTTACAGATGATGTATAATTCCAAATTCAGCTTGTAGGATAGAT GATATATAAACATTGGAATCATAGTGTAAAATTCTTTAGAAATTTGTGCCTCGTGA