Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0267100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:9159753:9165677:1 gene:Os01g0267100 gene_biotype:protein_coding transcript_biotype:protein_coding description:MT-A70 family protein. (Os01t0267100-01)
Sequence	ATGTTCTTGCAGTTGGCTGACTATCATTTGAGAATGGACTCACGATCACCAAAAATTCCA AGGAGAAGTCCTGATTCCAAGGATAAGGACTCTGATAGGAACAAGGAAAGAGATGCCAAG AATGATTGGGACTCATCAAGAGCATATGGCTCTGAGACTGATTGCAAGGAGGAAATGTGT GATAGCAATAAGAGGAAGGGTTTGACCATGGGGGAAATTGTTGTTGACAATAGCAGATCA GTGGATAGTTGTCATGAAACTGAATTGCATGTGTTAAGAGATGATCGGCAGGATAAATCT GTAGAGATAAAAGATATTTTGCATGATGGAGTTGCAAAAAGTGACTATGCTCAACGCCAG ATAGACTTGGATAGTGAAAGAAGGAATGGTACGGGAGATAACTCAAGGGTGGATGTCCTG AGAGATGACAAATTAGACAGCGGAAGGGACAGAAACTGGAGCGACAGAACACGGGAGCCT GAAGGATCTAAGGACTATGTGAGGAATCGTCAGTGGCAAGATTCTAAGGAGGCAAATGAT TCTGAATGGAAGAATGCACATGAAAGACTAGATGGTGGGAGTTTCCATGGGCGAGCTGGT TACCGGCGAGATTCTAGGGGTAGATCTGAAAGTATTAGAGGTTCTTCAACCTATGGAGGT CGGTATGACAGTTCTGATTCAATAGAGATCCGACCAAATAACAATCTTGATTTTGGACGA GAGGGCTCTGTTTCTGGAAGAAGATATGATGTGGGAGCTCATCGGGATGCAACACCTGGA ACGAATGGTGATAAATCCGCCAATCCTGAAGCAGATCAAAGTGGTAGTACCAGCACGATT TCTCAATTTCCTCAACATGGTCCTAAAGGTGATAGATCCTCAAGAGGAAGAGGTAGACCA AATAGCAGGGATTCTCAAAGAGTTGGAGGCACATTACCAATTATGCCCCCTCCTTTTGGT CCTCTTGGTCTGCCACCAGGACCAATGCAACATATTGGGCCAAATATTCCCCACTCTCCA GGCCCTCTTCTACCTGGTGTTTTTGTGCCGCCATTCCCTGGGCCTCTTGTGTGGCCTGGG GCACGAGGTGTTGATGTGAATATGCTTTCTGTTCCACCCAATCTTCCCATCCCTCCAGTT GCTGCTGAACATAGATTCGCTCCAAGTATGGGAGCTGGGCCTGGTCATAATATTCACCTA AACCAAATCGGCTCTGGAATAGGTGCTCCGACAAATGTGTCTGGATTGAGTTTCCATCAA TTGGGCACGCAAAGTCGTGAAATGGCACATGATAAACCGCCTGCTGGTGGTGGTTGGACG CCACATAGAAACAGTGGACCAACCAGAAAAGCTCCTTCAAGGGGTGAGCAGAATGATTAC TCACAGAACTTTGTGGACACTGGCATGCGACCTCAAAATTTCATTAGAGAACTGGATCTT ACAAGTGTAGCAGAGGACTATCCAAAATTGAGAGAACTCATCCAGAGGAAAGATGAAATT GTTGCCAATTCTGCTTCACCACCAATGTATTATAAGTGTGATCTGAGGCAACATGTTCTT TCTCCAGAATTTTTTGGTACAAAGTTTGATGTTATTCTTGTGGATCCTCCATGGGAGGAG TATGTTCACCGGGCACCAGGAATCACAGATCACATAGAGTATTGGAATGCTGAGGAGATT ATGAATTTAAAGATTGAGGCTATAGCAGATACTCCATCTTTTGTCTTCCTTTGGGTTGGT GATGGTGTAGGTCTTGAGCAGGGCCGTCAATGCTTAAAGAAGTGGGGATTTCGTAGATGT GAGGATGTTTGCTGGGTAAAAACCAACAAGAAAAATGCAACACCCAGTCTGCGGCATGAC TCTCATACAATACTGCAACACTCAAAGGAGCATTGCTTGATGGGTATTAAAGGAACAGTG CGACGTAGCACTGATGGACATGTTATCCACGCTAATATTGACACAGATATAATAATAGCT GAAGAACCAACCGATGGCTCAACTAAAAAGCCTGAAGACATGTACAGAATAATTGAGCAT TTCGCTCTTGGAAAGAGGCGCCTTGAACTCTTTGGAGAGGATCATAACATTCGTCCTGGT TGGCTTACTCTCGGGAAAGGTTTATCGTATTCCAACTTCAACAAAGAGGCTTATATCAAG AACTTTGCAGACAAGGATGGGAAAGTATGGCAGGGAGGCGGTGGACGAAATCCTCCTCCG GAGGCTCCCCATCTAGTTGTGACGACACCTGAGATTGAGGGCCTCAGGCCAAAGTCACCC CCACAGAAGAACTAA

Peptide Sequence

PEP ID	Os01t0267100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:9159753:9165677:1 gene:Os01g0267100 transcript:Os01t0267100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:MT-A70 family protein. (Os01t0267100-01)
Sequence	MFLQLADYHLRMDSRSPKIPRRSPDSKDKDSDRNKERDAKNDWDSSRAYGSETDCKEEMC DSNKRKGLTMGEIVVDNSRSVDSCHETELHVLRDDRQDKSVEIKDILHDGVAKSDYAQRQ IDLDSERRNGTGDNSRVDVLRDDKLDSGRDRNWSDRTREPEGSKDYVRNRQWQDSKEAND SEWKNAHERLDGGSFHGRAGYRRDSRGRSESIRGSSTYGGRYDSSDSIEIRPNNNLDFGR EGSVSGRRYDVGAHRDATPGTNGDKSANPEADQSGSTSTISQFPQHGPKGDRSSRGRGRP NSRDSQRVGGTLPIMPPPFGPLGLPPGPMQHIGPNIPHSPGPLLPGVFVPPFPGPLVWPG ARGVDVNMLSVPPNLPIPPVAAEHRFAPSMGAGPGHNIHLNQIGSGIGAPTNVSGLSFHQ LGTQSREMAHDKPPAGGGWTPHRNSGPTRKAPSRGEQNDYSQNFVDTGMRPQNFIRELDL TSVAEDYPKLRELIQRKDEIVANSASPPMYYKCDLRQHVLSPEFFGTKFDVILVDPPWEE YVHRAPGITDHIEYWNAEEIMNLKIEAIADTPSFVFLWVGDGVGLEQGRQCLKKWGFRRC EDVCWVKTNKKNATPSLRHDSHTILQHSKEHCLMGIKGTVRRSTDGHVIHANIDTDIIIA EEPTDGSTKKPEDMYRIIEHFALGKRRLELFGEDHNIRPGWLTLGKGLSYSNFNKEAYIK NFADKDGKVWQGGGGRNPPPEAPHLVVTTPEIEGLRPKSPPQKN

Transcript Sequence

Transcript ID	Os01t0267100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:9159753:9165677:1 gene:Os01g0267100 gene_biotype:protein_coding transcript_biotype:protein_coding description:MT-A70 family protein. (Os01t0267100-01)
Sequence	AGCTCCTCCCCCGGTAGGTGGACGACCGGCGAGCTCCACCCTCACGCACGGACGCCGGCG AGCTCCTCCCCTGGCGCGCGGACGGCAGGCGAGCTCCTCCCCCATCCGCGAACGCCGGAG AGCTCCTCCCCGGCGCGCGGACGGCAGGTGAGCTCGTCCCCCGCAGGCGGACGGCAGGCG AGCTCCTCCACCGCGCACGGACGCCGGCGAGCTCGCGGGACGGCCAGCAGGCTCCTCCCC CGCGCGTGGATGACCGGTGAGCTCCTCACCCGGCAGGCGGACGGCCGGCGAGTCTTCCCT CACGCGCGGACGCCGGTGAGCTCCTCACATAGTAGGCGGACGGCCGGCGAGCTCCTTTCC CACGAGAGGACGCCGGCGAGCTCCTCCCCCTGCGCATGGATGGCCGGCAACCTCGCGGGA CTGCCGGTGGGCTCCTCCCCCGCGCGTGGACGGCCGGCGAGCTCCTCCCCCGTACGTGCA CCGTCGCCGTCGCCGCCGCCCTGCCTCTAGTGTTGGAAGGTGAGAGCAGTGTAAAAGATG AGAGAGAGTGGGGGAAGAGGTGAGGATGACATGTAGGGCCCACATGTCCGTGGGTCCCAC TATTTCTTTTTTTTAATGACACGTCGGTCCCACAATTTTTTTATTACTTTTGTGCCAGAT AAGCGACACGTCGACGACACGTGGGACGAAGACCGAGTCAACACCGTCATATAGGCGCCA CGTCAACCAAAACCTCTTCCAAAACCACCCAGGGATGGGATATAGTTTGCATCGGTTTTA ATAGTTGGGGGAGTCAATATACCTGGTTTTGTTTTGTGGTTGGAGGTTATGAATCATACT CGGACCATAGTTGAGGGAGTCCAACTATACTTTTTCCGATGATATACACGTGCTTGTTTC TAGTGGGACGTATCAGATAGCCCGCAATCATATTCCGACCCAATTGAAATCTGATACCGG GCTGGGCCGTATCCATTACTAGAATGAATATACGGCCCAATTGAAAGCTTACAGGCACGG CGTGAGCGCGGCGTGGCTTAGCCCAAATCGACCGACCGATCGATTCCAGGAGCGTCGAGC GCCTCCGCCGCGCTCCGCCGCGCTCCGCCGCCGCCGCTGCTCTCCCCGCCCCTCGCGGGG AAGTCGCGCGAGGCGTCGTCGGCGGAGAGCGCGCTGTGGTGCGCCGCCGCCGCCGCGGCA GCCTACGCCCTTGTCCGTGTTGAATAGTACTACTACCATATAAACAGTCCGTCGCCGGAG GTTCTGCTAGGGTTTCGGCTAGCGGGGTGTGAGGTGGGCCGTCCGCCGCCGCCTCGGCTT GGAGCTTGGCCACCCCCTCGGCAAGGCCGGCGCCGCGCTGCTCCGCCGCCTTCCCCTCTC CCAGCCAGCGCGCGCCGCCGCCTTCCCTGAGTTCCTCCCTGACGGATCCCGCAGGTTCCT TGCTATTAGTAATCGTTAATTTTTTTACTGGGTGATTTCATGTTCTTGTAAAGAATTTCA GGGTAGAAATCCGAGTAATTTCTTCTCTCTCTGTTGATGTTTTTTTTCCTTCAAATTTTC TGTTCATGCGTATCTACATGTTTGTACAGCCAAACTTGAAACTGTGCATGCGCATCACCT TCATGCCCAAAATTTACATGAATTCCTTCCAAACATAGTAAAGGAAATGGTAACCAAACA ATGCATTCCTTCCAAACACAGTAAAGGAAATGATAACCAAACAATTTCTTCCTTTCATTA CTGTTTGCGGTTTCAGACTCTTACCAAACACCACCTTAATTTAAATCTTGCTCCAGTTTT GCACCTTATTTGACATGTATGCACTGTTGTATATTACCCAGCCCCATTGTTAAAGAGGAA CGTAGTAGATGTGTACTACTATACCACAGTATATTATCTTTTGGGGTTTGAAAGTAAGCC TTGTTTCCATGAAAAAAATGTTCCGACATCCTTCCTTTGTATCGAAGACCTTGTTTCAAT TAGTTGTTTACATATTTAACGCAAGCTCACTTGTGTGGTACGAATTCTGTAATGCTATTA TGTGCTGCAAGTATAATATATTTTACCATTCTTTTATGTAGTGAAACCTGAAGTTTTTAG CCAATGGTTTCTGAGATCAGCTGTATTATTCAGATTTGTGTAGTGAAACCTGAAGTTTAG CCAATGGTTTCTGAGATCAGTTGTATTATTCGGATTTATGCTGTGAAACCTGAAGTTTAG CCAAAGGTTTCTGAGATCAGTTGTATTCTTCGGAGGAGGGATAACAATATTTATGTTCTT GCAGTTGGCTGACTATCATTTGAGAATGGACTCACGATCACCAAAAATTCCAAGGAGAAG TCCTGATTCCAAGGATAAGGACTCTGATAGGAACAAGGAAAGAGATGCCAAGAATGATTG GGACTCATCAAGAGCATATGGCTCTGAGACTGATTGCAAGGAGGAAATGTGTGATAGCAA TAAGAGGAAGGGTTTGACCATGGGGGAAATTGTTGTTGACAATAGCAGATCAGTGGATAG TTGTCATGAAACTGAATTGCATGTGTTAAGAGATGATCGGCAGGATAAATCTGTAGAGAT AAAAGATATTTTGCATGATGGAGTTGCAAAAAGTGACTATGCTCAACGCCAGATAGACTT GGATAGTGAAAGAAGGAATGGTACGGGAGATAACTCAAGGGTGGATGTCCTGAGAGATGA CAAATTAGACAGCGGAAGGGACAGAAACTGGAGCGACAGAACACGGGAGCCTGAAGGATC TAAGGACTATGTGAGGAATCGTCAGTGGCAAGATTCTAAGGAGGCAAATGATTCTGAATG GAAGAATGCACATGAAAGACTAGATGGTGGGAGTTTCCATGGGCGAGCTGGTTACCGGCG AGATTCTAGGGGTAGATCTGAAAGTATTAGAGGTTCTTCAACCTATGGAGGTCGGTATGA CAGTTCTGATTCAATAGAGATCCGACCAAATAACAATCTTGATTTTGGACGAGAGGGCTC TGTTTCTGGAAGAAGATATGATGTGGGAGCTCATCGGGATGCAACACCTGGAACGAATGG TGATAAATCCGCCAATCCTGAAGCAGATCAAAGTGGTAGTACCAGCACGATTTCTCAATT TCCTCAACATGGTCCTAAAGGTGATAGATCCTCAAGAGGAAGAGGTAGACCAAATAGCAG GGATTCTCAAAGAGTTGGAGGCACATTACCAATTATGCCCCCTCCTTTTGGTCCTCTTGG TCTGCCACCAGGACCAATGCAACATATTGGGCCAAATATTCCCCACTCTCCAGGCCCTCT TCTACCTGGTGTTTTTGTGCCGCCATTCCCTGGGCCTCTTGTGTGGCCTGGGGCACGAGG TGTTGATGTGAATATGCTTTCTGTTCCACCCAATCTTCCCATCCCTCCAGTTGCTGCTGA ACATAGATTCGCTCCAAGTATGGGAGCTGGGCCTGGTCATAATATTCACCTAAACCAAAT CGGCTCTGGAATAGGTGCTCCGACAAATGTGTCTGGATTGAGTTTCCATCAATTGGGCAC GCAAAGTCGTGAAATGGCACATGATAAACCGCCTGCTGGTGGTGGTTGGACGCCACATAG AAACAGTGGACCAACCAGAAAAGCTCCTTCAAGGGGTGAGCAGAATGATTACTCACAGAA CTTTGTGGACACTGGCATGCGACCTCAAAATTTCATTAGAGAACTGGATCTTACAAGTGT AGCAGAGGACTATCCAAAATTGAGAGAACTCATCCAGAGGAAAGATGAAATTGTTGCCAA TTCTGCTTCACCACCAATGTATTATAAGTGTGATCTGAGGCAACATGTTCTTTCTCCAGA ATTTTTTGGTACAAAGTTTGATGTTATTCTTGTGGATCCTCCATGGGAGGAGTATGTTCA CCGGGCACCAGGAATCACAGATCACATAGAGTATTGGAATGCTGAGGAGATTATGAATTT AAAGATTGAGGCTATAGCAGATACTCCATCTTTTGTCTTCCTTTGGGTTGGTGATGGTGT AGGTCTTGAGCAGGGCCGTCAATGCTTAAAGAAGTGGGGATTTCGTAGATGTGAGGATGT TTGCTGGGTAAAAACCAACAAGAAAAATGCAACACCCAGTCTGCGGCATGACTCTCATAC AATACTGCAACACTCAAAGGAGCATTGCTTGATGGGTATTAAAGGAACAGTGCGACGTAG CACTGATGGACATGTTATCCACGCTAATATTGACACAGATATAATAATAGCTGAAGAACC AACCGATGGCTCAACTAAAAAGCCTGAAGACATGTACAGAATAATTGAGCATTTCGCTCT TGGAAAGAGGCGCCTTGAACTCTTTGGAGAGGATCATAACATTCGTCCTGGTTGGCTTAC TCTCGGGAAAGGTTTATCGTATTCCAACTTCAACAAAGAGGCTTATATCAAGAACTTTGC AGACAAGGATGGGAAAGTATGGCAGGGAGGCGGTGGACGAAATCCTCCTCCGGAGGCTCC CCATCTAGTTGTGACGACACCTGAGATTGAGGGCCTCAGGCCAAAGTCACCCCCACAGAA GAACTAAGGGCAGCAGCCATTGGGCTCTATAGGTGTGGTTGCAAGTGCACTTACAAGCGA GCAACCTGGTAGAATATCCCCGAGATCAGTAGTTACCGTGATTGGTTCAGACTTGAGAGG CTAATTTTTTCGTACCTGTAGCTTTATTACATCGCATTTCCTCTTATTGAAGTTTAGCCG AGGTGGTGCGGATGGATATTCAGTCTAACAGACTCAATGAACGCTTTGTTGTATGACTTG TACAGTACTGGCTGCTCGAACAGGATGGTTCAGCTTCCAGAAATTTGGCAACGCTCCATT TCAAAGAAAATCATTCAGTATTTGCCTT