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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0266600-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:9118186:9121337:-1 gene:Os01g0266600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRXIIF description:Thioredoxin fold domain containing protein. (Os01t0266600-01);Thioredoxin fold domain containing protein. (Os01t0266600-02)
Sequence

ATGGCGTCGGCGCTGCTGAGGAAGGCGACGGTAGGCGGCTCCGCGGCGGCGGCGGCGGCG
AGGTGGGCTTCCAGGGGGCTCGCGTCGGTGGGCTCCGGCTCCGACATCGTCTCGGCGGCG
CCCGGCGTGTCGCTGCAGAAGGCCCGCTCCTGGGACGAGGGCGTCGCCACCAACTTCTCC
ACCACCCCTCTCAAGGACATCTTCCATGGGAAGAAAGTGGTCATCTTCGGCCTGCCTGGT
GCATACACAGGAGTCTGTTCACAGGCACACGTCCCTAGTTATAAAAATAACATTGACAAG
TTGAAAGCAAAAGGGGTTGACTCTGTTATCTGTGTCTCTGTGAATGACCCTTATGCCCTG
AATGGATGGGCAGAAAAGCTACAGGCAAAAGATGCTATTGAATTTTATGGTGATTTTGAT
GGGAGTTTCCACAAAAGCTTGGATTTGGAAGTAGACCTCTCTGCTGCTTTGCTTGGCCGC
CGTTCCCACAGGTGGTCAGCCTTTGTTGACGATGGGAAGATCAAGGCTTTCAATGTTGAG
GTAGCTCCTTCTGACTTCAAGGTTTCTGGTGCCGAGGTGATCTTGGACCAAATCTGA

Peptide Sequence

PEP ID

Os01t0266600-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:9118186:9121337:-1 gene:Os01g0266600 transcript:Os01t0266600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRXIIF description:Thioredoxin fold domain containing protein. (Os01t0266600-01);Thioredoxin fold domain containing protein. (Os01t0266600-02)
Sequence

MASALLRKATVGGSAAAAAARWASRGLASVGSGSDIVSAAPGVSLQKARSWDEGVATNFS
TTPLKDIFHGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYAL
NGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVE
VAPSDFKVSGAEVILDQI

Transcript Sequence

Transcript ID

Os01t0266600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:9118186:9121337:-1 gene:Os01g0266600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRXIIF description:Thioredoxin fold domain containing protein. (Os01t0266600-01);Thioredoxin fold domain containing protein. (Os01t0266600-02)
Sequence

ATCCCCCGAGCAAGCAAAGCGGAGGAACGCGATGGCGTCGGCGCTGCTGAGGAAGGCGAC
GGTAGGCGGCTCCGCGGCGGCGGCGGCGGCGAGGTGGGCTTCCAGGGGGCTCGCGTCGGT
GGGCTCCGGCTCCGACATCGTCTCGGCGGCGCCCGGCGTGTCGCTGCAGAAGGCCCGCTC
CTGGGACGAGGGCGTCGCCACCAACTTCTCCACCACCCCTCTCAAGGACATCTTCCATGG
GAAGAAAGTGGTCATCTTCGGCCTGCCTGGTGCATACACAGGAGTCTGTTCACAGGCACA
CGTCCCTAGTTATAAAAATAACATTGACAAGTTGAAAGCAAAAGGGGTTGACTCTGTTAT
CTGTGTCTCTGTGAATGACCCTTATGCCCTGAATGGATGGGCAGAAAAGCTACAGGCAAA
AGATGCTATTGAATTTTATGGTGATTTTGATGGGAGTTTCCACAAAAGCTTGGATTTGGA
AGTAGACCTCTCTGCTGCTTTGCTTGGCCGCCGTTCCCACAGGTGGTCAGCCTTTGTTGA
CGATGGGAAGATCAAGGCTTTCAATGTTGAGGTAGCTCCTTCTGACTTCAAGGTTTCTGG
TGCCGAGGTGATCTTGGACCAAATCTGATCCGAGTAACGAAATTCTGTCGTTGTTTGTTT
TCTCATGCAGCATGCATGCTTTTGCTGTAGTAAATAAACGAAAACTCGACTACTCGAGTA
TCCATGTAAAGATGTTTGTAGTCTGCCTTGCTACGCCCAGAATATTTGTTTTCCTGTTAC
AAATCAGCTTGCCGGGCAACATGTTTGTCAGCATTGACGTGAGCTCTAACTTC