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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0266100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:9088088:9089013:1 gene:Os01g0266100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING finger family protein. (Os01t0266100-01)
Sequence

ATGGAGATCGGTGGCGTGCTCGTGTCGCTGCTCTTCGCCGCCTTCTCCCTCCCCTGCCTC
CTCCTCCTCCTCGTCCTCGCCGAGGCCGGCCTCCGCCTCGCCTCCCTCGCGCTCCGCGGC
GGCCGCTACGCCTGGCCCACCCGCTCCGACTTCCTCGGCTACCGCATCGCCCGCCGCCGC
CGCGCCGCCGTCTCCGGCGGCGCCGGCGGGGCGGACGGCGAGGAGGAGGCGCAGCCGACG
GCGGAGTGCTGCGACCGCCTTGCCGTGGCGATGTACCGGCGCGGGCGCGACGCGGCTCCC
GTGGACTGCGTGTTCTGCCTGTCGCGGGTGGACGACGGCGAGGAGGTCCGCGAGCTCCGG
TGCCGCCACGTCTTCCACCGCGCCTGCCTCGACGCCTGGCTCGTCCTCCCGCGCGCCACC
TGCCCGCTCTGCCGCGACTGCCTCCTCCCGCCGCCGTGCGAGCCGCCGCGCAGCTTCCCG
CTCGACTACTACGACGACGACGACGACGTCCACTTCGGCTTCAACGACTTCTCCATCACC
TCCTCCACCACCACCACCACCTCCGCCGCCGCCGCCGTCGCCTACCCACACGGCGTCGCG
CTCTGGCCCATGTAA

Peptide Sequence

PEP ID

Os01t0266100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:9088088:9089013:1 gene:Os01g0266100 transcript:Os01t0266100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING finger family protein. (Os01t0266100-01)
Sequence

MEIGGVLVSLLFAAFSLPCLLLLLVLAEAGLRLASLALRGGRYAWPTRSDFLGYRIARRR
RAAVSGGAGGADGEEEAQPTAECCDRLAVAMYRRGRDAAPVDCVFCLSRVDDGEEVRELR
CRHVFHRACLDAWLVLPRATCPLCRDCLLPPPCEPPRSFPLDYYDDDDDVHFGFNDFSIT
SSTTTTTSAAAAVAYPHGVALWPM

Transcript Sequence

Transcript ID

Os01t0266100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:9088088:9089013:1 gene:Os01g0266100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING finger family protein. (Os01t0266100-01)
Sequence

TTTTCCAGCCCAAAGCCAAGCGCCTCGGCTCGCTCTCGCCGCCTCGCCGCGCGCCGCGCG
CTCGCCATGGAGATCGGTGGCGTGCTCGTGTCGCTGCTCTTCGCCGCCTTCTCCCTCCCC
TGCCTCCTCCTCCTCCTCGTCCTCGCCGAGGCCGGCCTCCGCCTCGCCTCCCTCGCGCTC
CGCGGCGGCCGCTACGCCTGGCCCACCCGCTCCGACTTCCTCGGCTACCGCATCGCCCGC
CGCCGCCGCGCCGCCGTCTCCGGCGGCGCCGGCGGGGCGGACGGCGAGGAGGAGGCGCAG
CCGACGGCGGAGTGCTGCGACCGCCTTGCCGTGGCGATGTACCGGCGCGGGCGCGACGCG
GCTCCCGTGGACTGCGTGTTCTGCCTGTCGCGGGTGGACGACGGCGAGGAGGTCCGCGAG
CTCCGGTGCCGCCACGTCTTCCACCGCGCCTGCCTCGACGCCTGGCTCGTCCTCCCGCGC
GCCACCTGCCCGCTCTGCCGCGACTGCCTCCTCCCGCCGCCGTGCGAGCCGCCGCGCAGC
TTCCCGCTCGACTACTACGACGACGACGACGACGTCCACTTCGGCTTCAACGACTTCTCC
ATCACCTCCTCCACCACCACCACCACCTCCGCCGCCGCCGCCGTCGCCTACCCACACGGC
GTCGCGCTCTGGCCCATGTAATAAATGTAATAATCGCCATTGCTGCCGCTGCCGGCTGCC
GCCATGCGAGAAGCCGAGGAGCAGAGTGTTCTCTCTGTTTTTCTTCTTCTTTTTTTTTGG
TTTCTTTTTGCATAGTTTTTTTTAGTAATTAGTTGCTAATTAATTTGGGACTGATTGCTT
GATTAATCTAATGTAATCTAAGATGATCTGGCTAGGTGGCCCATGTAAAGTAATGTAATA
ATCTCCAATTCTCCATTGTTGCTGCC