Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0263400-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:8921590:8924862:-1 gene:Os01g0263400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0263400-00)
Sequence	ATGCCGCTCGCCGGCGGCGAGCCCCGACCACCACCGCCGCTCCCGTCGCTGGTCAAGCTC GGAAGGGCCGTCACGCCGCGCCGCGTGGACATCCTACTGGCGGCGCTCCTCCGCCGGCGG AGGCACCGCCTCGTCGGCGCGCTCGCCTCGCAGGCGGTCGCCAACTCCGTGCGCCCCACC GCGCGCACCCACCTCCTGGTCGCCTCGGCGCTTCTAGATTCTTCCCGTCCGCGCGACGCG GCAGCGCGCCTCGCGCTCGCCGGCCCGGCAACCTCCTCCGCGCGCCGCCTCTGGGACGCG CTGCTCCGCCGGGCCTGCGCGGTGCGCGGCGATGCTCGCCGCGCGCTGGAGGTGCTCTCC GCCGGCGTAGAGGAGTGCGGGCTCGTGTTTTCTCCGTCCACGTATCGTGTGGCCCTGACG ATGCTGTGTGCCCGCGGTGACATGGAGACCGCGCTCAAGGTGTTCGACGTAATGGCTGCA GCGGGGTGTCAGGTGGATGATCGTGTTTGCAGCGTGATCATTTCAGGCTTCTCCAAGGTC GGGAAGGCTGGGGATGGGCTGGAATTCTATAGGAGGGTGAGGAGAGAGTTCAATGGATTT GAGCCAGGCTTGATCACATTAACCGCTTTTGTCGATGTGCTTGGCCGTGTAGGGAGAACT ACTGAGGCAGCACAATTGGTAAGGGAGATGGAAGGGAAGGGGTTGGTTGGTGATGCTGTT TTATATGGCAGCTTGGTTCATGGATACATGAGTAGCGGGTTATTGATGAAAGGGCTCCGT GAGCATCGGGTGATGTTAGATAAGGGCATTGCAGCTGATGTAGTTAGTTATACTACTGTT ATTGATGGACTTTGCAGAGAACGTAGTGTGGAAAAAGTGATGGGATTCTTGGATGAGATG AACCGAAGGGATGCTAAGCCGAATTTGATCACTTATACATCATTGATTGGTGGTTTCTGC AAGAGAAACAGGTTGGATGATGCTTTTTCTATAGTGAGGAAACTGGAACAGACAGGAGTG GTGGTGGATGAATATGTTTACTCAATTTTGATTGACAATTTGTGCAAAAAGGGATATTTG GATAGGGCTTTCTCTTTGCTTGAAGAGATGGATAAAAAGGGGATAAAGATTGGAATCGTA ACATACAATTCAGTAATAAATGGTCTATGTAAGGTTGGTCACACCAAGAAGGCTGTTGAA ATATATGAAGGTATTGCTGCTGATAACTTCACATATAGCACGCTGTTACATGGTCACATT AAGGTAGAAGATGCAACTGGTGTAATGGCAATAAAAGGTAGGCTTGAGAGCAGCGGTGTT ACAATTGATGTTGTCACATGCAATGTACTTATCAAAGCATTATTTATGATTAAGAAGGTG GATGATGCCTGCAGCTTGTTTCTTAGAATGCCCGAGATGAGATTAAGGCCTAATATTGTC ACATATCATACAGTTATTGACATGATGTGTAAACTTGGAGAAACTGACAGGGCACTGCAG TTGTTTGATGATTACAAAGAAGACATCTTGTTCTCCTCTACAATAGTACACAATTGCCTG ATTATAGCATTGTGTAATGGAGGAAAGGTAAACATGGCTGAGCAGATTTTTAATGATCTT ATCCAAAGAAATTTAAGGCCTGATTCCTGTACTTACAAGAAGTTGATCCATACACACTTT AAAGAAGGCGGTGAACATGGCGTGCTGAATTTCATTCTTAAGGTGGATGGATCTGAAATT GACTTATTTTCATCTCTATGTAATTATGCTTCCGCTTTCTTAAGCACAAGAGATTGCTAC CAAGGAGCATTGGATGTTTACAAGCTTCTAAGAATGAAATCATTTACTGTAACTAGCAAA ACATGCTACAGGCTACTCAAATGCTTGCTCCGAAATGGTCATGAACAGACCATCCAGCCA TTATTAAGTCAGTTCATTAAAATTCATGGCCTGGATGAACCTAGAATGATTAATATGCTA TCTTGCCACCTCAGCAAGAACAGTGTTGGTGAAGCTATTGGGTTTTCCAATTACATGAAC AATGGCCGTGTTCCTGTCAGTGTTCTAAGAGAAGCTGTATACACACTAAAGAGGGAAGGT AGAATTCTGGATGCATGCAACTTTTTGAAGGAAGCTGAACAAAATGGTTATTCAGTGGAT CTTGCCATGTACTCCATATTAGTGGAAGGCCTTTGTAAAAGTGGTTATCTTGAGAAGGCA TTAGACCTATGCGAAAGCATGAAAGAAGAAGGGATTCAGCCAAACATTGTCATCCATAAC TCTGTTCTGAATGGTTTGTGCCAGCAGGGATGCCTTACTGAAGCATTCCGGCTATTTGAC TACCTAGAAAGCAGTGAAGTGCTTCCGACACTGGTAACTTACTCTATACTTATAGCTGCT TTGTGCAGAGAAGGTTTTTTGGATGACGCTCATGAGTTGTTTCAGAAAATGTCCACCAAG GGTATCAAACCCACTACACGTGTTTACAACTTGCTAATAAGTGGTTATTGTAACTACGGG TTAACTGAGAAAGCACTGGAGCTTATATCACATTTTGAGGAAATATTTCTATTCCCAGAC GCTATTACAATTGGTGCAATAATTAATGGACACTGCCTAAAAGGTGACATTGAATCAGCA TTAGGCTTCTTTAGTGAATACTATCATAAGGAGATGGTTCCAGATTTTGTTGGCTTCATG AGCCTGGTCAAAGGACTCTATGCAAAAGGAAGAATGGAAGAATCTAGGAGCATCTTGAGA GAGATGTTTCAGTGCAAAGAAGTTGCAGAGTTCATAAACAGTGTTGGGGATAAGATCCAA GCAGAATCTTTTGTTGGCCTTCTATTTTCTGCCTGTGAGCAAGGGAGGATTGATGAGGTC GTGACTATCCTAAATGAAGTGGCGCTCATGTCTGTATCCTCTTCAGATTCTAATAATTGT AGCACGCTTAGTCACCTGAAGAACGTAGAGACACCTGTGGCTTATGATCGTAATATGGAT AATCCTGGACAAGTTTTATGTTCAACTACTTATGGTGTTTCTAGCAACTGTCTTCATGGA ATTTCTGAAGGCACAGTTCAACCCACAATAGATGGAGCTGAGAATTTATGCACACCAAGT GATGATACTGATATTTACTATGATAATTTGCTACGGAATTCTTTCCATGATGACTTTGAC ACATATTATCCAGCAATCGCTTCACTTTGCTTAAAAGGGGAACTGATTAAGGCCAACAAA GCAATTGAAGCAATGATTCAGAATTCTAGTTGA

Peptide Sequence

PEP ID	Os01t0263400-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:8921590:8924862:-1 gene:Os01g0263400 transcript:Os01t0263400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0263400-00)
Sequence	MPLAGGEPRPPPPLPSLVKLGRAVTPRRVDILLAALLRRRRHRLVGALASQAVANSVRPT ARTHLLVASALLDSSRPRDAAARLALAGPATSSARRLWDALLRRACAVRGDARRALEVLS AGVEECGLVFSPSTYRVALTMLCARGDMETALKVFDVMAAAGCQVDDRVCSVIISGFSKV GKAGDGLEFYRRVRREFNGFEPGLITLTAFVDVLGRVGRTTEAAQLVREMEGKGLVGDAV LYGSLVHGYMSSGLLMKGLREHRVMLDKGIAADVVSYTTVIDGLCRERSVEKVMGFLDEM NRRDAKPNLITYTSLIGGFCKRNRLDDAFSIVRKLEQTGVVVDEYVYSILIDNLCKKGYL DRAFSLLEEMDKKGIKIGIVTYNSVINGLCKVGHTKKAVEIYEGIAADNFTYSTLLHGHI KVEDATGVMAIKGRLESSGVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIV TYHTVIDMMCKLGETDRALQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDL IQRNLRPDSCTYKKLIHTHFKEGGEHGVLNFILKVDGSEIDLFSSLCNYASAFLSTRDCY QGALDVYKLLRMKSFTVTSKTCYRLLKCLLRNGHEQTIQPLLSQFIKIHGLDEPRMINML SCHLSKNSVGEAIGFSNYMNNGRVPVSVLREAVYTLKREGRILDACNFLKEAEQNGYSVD LAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLCQQGCLTEAFRLFD YLESSEVLPTLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRVYNLLISGYCNYG LTEKALELISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFFSEYYHKEMVPDFVGFM SLVKGLYAKGRMEESRSILREMFQCKEVAEFINSVGDKIQAESFVGLLFSACEQGRIDEV VTILNEVALMSVSSSDSNNCSTLSHLKNVETPVAYDRNMDNPGQVLCSTTYGVSSNCLHG ISEGTVQPTIDGAENLCTPSDDTDIYYDNLLRNSFHDDFDTYYPAIASLCLKGELIKANK AIEAMIQNSS

Transcript Sequence

Transcript ID	Os01t0263400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8921590:8924862:-1 gene:Os01g0263400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0263400-00)
Sequence	ATGCCGCTCGCCGGCGGCGAGCCCCGACCACCACCGCCGCTCCCGTCGCTGGTCAAGCTC GGAAGGGCCGTCACGCCGCGCCGCGTGGACATCCTACTGGCGGCGCTCCTCCGCCGGCGG AGGCACCGCCTCGTCGGCGCGCTCGCCTCGCAGGCGGTCGCCAACTCCGTGCGCCCCACC GCGCGCACCCACCTCCTGGTCGCCTCGGCGCTTCTAGATTCTTCCCGTCCGCGCGACGCG GCAGCGCGCCTCGCGCTCGCCGGCCCGGCAACCTCCTCCGCGCGCCGCCTCTGGGACGCG CTGCTCCGCCGGGCCTGCGCGGTGCGCGGCGATGCTCGCCGCGCGCTGGAGGTGCTCTCC GCCGGCGTAGAGGAGTGCGGGCTCGTGTTTTCTCCGTCCACGTATCGTGTGGCCCTGACG ATGCTGTGTGCCCGCGGTGACATGGAGACCGCGCTCAAGGTGTTCGACGTAATGGCTGCA GCGGGGTGTCAGGTGGATGATCGTGTTTGCAGCGTGATCATTTCAGGCTTCTCCAAGGTC GGGAAGGCTGGGGATGGGCTGGAATTCTATAGGAGGGTGAGGAGAGAGTTCAATGGATTT GAGCCAGGCTTGATCACATTAACCGCTTTTGTCGATGTGCTTGGCCGTGTAGGGAGAACT ACTGAGGCAGCACAATTGGTAAGGGAGATGGAAGGGAAGGGGTTGGTTGGTGATGCTGTT TTATATGGCAGCTTGGTTCATGGATACATGAGTAGCGGGTTATTGATGAAAGGGCTCCGT GAGCATCGGGTGATGTTAGATAAGGGCATTGCAGCTGATGTAGTTAGTTATACTACTGTT ATTGATGGACTTTGCAGAGAACGTAGTGTGGAAAAAGTGATGGGATTCTTGGATGAGATG AACCGAAGGGATGCTAAGCCGAATTTGATCACTTATACATCATTGATTGGTGGTTTCTGC AAGAGAAACAGGTTGGATGATGCTTTTTCTATAGTGAGGAAACTGGAACAGACAGGAGTG GTGGTGGATGAATATGTTTACTCAATTTTGATTGACAATTTGTGCAAAAAGGGATATTTG GATAGGGCTTTCTCTTTGCTTGAAGAGATGGATAAAAAGGGGATAAAGATTGGAATCGTA ACATACAATTCAGTAATAAATGGTCTATGTAAGGTTGGTCACACCAAGAAGGCTGTTGAA ATATATGAAGGTATTGCTGCTGATAACTTCACATATAGCACGCTGTTACATGGTCACATT AAGGTAGAAGATGCAACTGGTGTAATGGCAATAAAAGGTAGGCTTGAGAGCAGCGGTGTT ACAATTGATGTTGTCACATGCAATGTACTTATCAAAGCATTATTTATGATTAAGAAGGTG GATGATGCCTGCAGCTTGTTTCTTAGAATGCCCGAGATGAGATTAAGGCCTAATATTGTC ACATATCATACAGTTATTGACATGATGTGTAAACTTGGAGAAACTGACAGGGCACTGCAG TTGTTTGATGATTACAAAGAAGACATCTTGTTCTCCTCTACAATAGTACACAATTGCCTG ATTATAGCATTGTGTAATGGAGGAAAGGTAAACATGGCTGAGCAGATTTTTAATGATCTT ATCCAAAGAAATTTAAGGCCTGATTCCTGTACTTACAAGAAGTTGATCCATACACACTTT AAAGAAGGCGGTGAACATGGCGTGCTGAATTTCATTCTTAAGGTGGATGGATCTGAAATT GACTTATTTTCATCTCTATGTAATTATGCTTCCGCTTTCTTAAGCACAAGAGATTGCTAC CAAGGAGCATTGGATGTTTACAAGCTTCTAAGAATGAAATCATTTACTGTAACTAGCAAA ACATGCTACAGGCTACTCAAATGCTTGCTCCGAAATGGTCATGAACAGACCATCCAGCCA TTATTAAGTCAGTTCATTAAAATTCATGGCCTGGATGAACCTAGAATGATTAATATGCTA TCTTGCCACCTCAGCAAGAACAGTGTTGGTGAAGCTATTGGGTTTTCCAATTACATGAAC AATGGCCGTGTTCCTGTCAGTGTTCTAAGAGAAGCTGTATACACACTAAAGAGGGAAGGT AGAATTCTGGATGCATGCAACTTTTTGAAGGAAGCTGAACAAAATGGTTATTCAGTGGAT CTTGCCATGTACTCCATATTAGTGGAAGGCCTTTGTAAAAGTGGTTATCTTGAGAAGGCA TTAGACCTATGCGAAAGCATGAAAGAAGAAGGGATTCAGCCAAACATTGTCATCCATAAC TCTGTTCTGAATGGTTTGTGCCAGCAGGGATGCCTTACTGAAGCATTCCGGCTATTTGAC TACCTAGAAAGCAGTGAAGTGCTTCCGACACTGGTAACTTACTCTATACTTATAGCTGCT TTGTGCAGAGAAGGTTTTTTGGATGACGCTCATGAGTTGTTTCAGAAAATGTCCACCAAG GGTATCAAACCCACTACACGTGTTTACAACTTGCTAATAAGTGGTTATTGTAACTACGGG TTAACTGAGAAAGCACTGGAGCTTATATCACATTTTGAGGAAATATTTCTATTCCCAGAC GCTATTACAATTGGTGCAATAATTAATGGACACTGCCTAAAAGGTGACATTGAATCAGCA TTAGGCTTCTTTAGTGAATACTATCATAAGGAGATGGTTCCAGATTTTGTTGGCTTCATG AGCCTGGTCAAAGGACTCTATGCAAAAGGAAGAATGGAAGAATCTAGGAGCATCTTGAGA GAGATGTTTCAGTGCAAAGAAGTTGCAGAGTTCATAAACAGTGTTGGGGATAAGATCCAA GCAGAATCTTTTGTTGGCCTTCTATTTTCTGCCTGTGAGCAAGGGAGGATTGATGAGGTC GTGACTATCCTAAATGAAGTGGCGCTCATGTCTGTATCCTCTTCAGATTCTAATAATTGT AGCACGCTTAGTCACCTGAAGAACGTAGAGACACCTGTGGCTTATGATCGTAATATGGAT AATCCTGGACAAGTTTTATGTTCAACTACTTATGGTGTTTCTAGCAACTGTCTTCATGGA ATTTCTGAAGGCACAGTTCAACCCACAATAGATGGAGCTGAGAATTTATGCACACCAAGT GATGATACTGATATTTACTATGATAATTTGCTACGGAATTCTTTCCATGATGACTTTGAC ACATATTATCCAGCAATCGCTTCACTTTGCTTAAAAGGGGAACTGATTAAGGCCAACAAA GCAATTGAAGCAATGATTCAGAATTCTAGTTGA