Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0258700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:8659413:8664796:-1 gene:Os01g0258700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 description:Zinc finger, CCCH-type domain containing protein. (Os01t0258700-01);Similar to zinc finger CCCH type domain-containing protein ZFN-like 1. (Os01t0258700-03)
Sequence	ATGGAGCAGCCGCACGCCGCCGCCGCCGCAGCTGGTGGAGGGGAGGGGGAGGGCGGGGCT AGCCCCGACACCGGCCTGGAAGGGCCGATGTGGAGGATGGGGCTGGGAGGAGGAGGCGGG GGAGGTGGAGGTGGAGGAGGAGGGGATGGGGACGCGGCGGGGAGGCTGCCGGAGCGGCCC GGGGAGGAGGACTGTGTCTACTACCTCCGCACCGGCGCGTGCGGCTTCGGTGACCGCTGC CGCTACAACCACCCGCGCGATCGCGGCGGCACTGAGTTTGGTGGAGGTGCAAGGAATGCA GCAGCATTGGATTATCCAGAAAGGGCGGGTCAACCTATATGCGAGTATTACATGAAGACT GGGACTTGCAAATTTGGTACCAATTGCAAATATCACCATCCTAAGCAAGATGGAGCTGTG CTACCTGTTATGTTAAACAACAGTGGATTCCCTATACGCCTGGGTGAGAAGGAGTGCTCC TACTACATGAAAACTGGGCAATGTAAATTTGGAACTACATGTAAATTCCATCATCCGGAA TTCGGTGGTGTTCCGATGACCCCTGGAATATACCCACCATTACAGTCTCCATCTATAGCT TCCCCTCATCCATATGCTTCTCTTGCAAATTGGCAAATGGGGAGACCACCTGTAGTTCCT GGATCATATATACCAGGCTCATACACCCCAATGATGCTCTCATCTGGAATGATCCCATTG CAAGGATGGAGCCCTTATCCGGCTTCGGTAAACCCTGTAGTGTCAGGTGGAGCTCAACAA AATGTTCAAGCTGGACCTGTGTACGGCATGGGGCACCATGGATCTTCCTCTACAATTGCT TATGGTGGTCCTTACGTTCCATATGCTTCCTCAACTGGACAATCAAGCAACAATCAACAA GAACATGGATTCCCTGAGCGGCCAGGGCAGCCTGATTGTCAATATTATATGAGAACAGGA GATTGCAAATTTGGAGCTACATGTAAATATCATCACCCCCGAGAGTTGAGTGCACCTAAA TCAGGCTATATGGTCAACTCCCTTTGTCTTCCACTTCGTCCGGGGGCTCAGCCTTGTGCA TACTATGCCCAAAATGGGTATTGCAGATATGGAGTTGCATGCAAGTATGATCACCCAATG GGCACGCTTGGCTACAGTCCGTCTGCTTTGCCCCTCTCTGATATGCCAATTGCCCCATAT CCTATTGGCTTCTCTATTGCCACATTGGCTCCGTCTTCGCCTTCCCCGGATTTAAGGCCA GAATACATTTCGACCAAAGACCAATCTGTCAACCAAGTAACATCGCCAGTGGCAGCATCC GAGCCTGTTGGATCAATATTGCCGAAAGGGGTTTTCCCAGCAGACACCATGATGCGTGCT CAGACTAACACAACATCTGGTGGTAGCTCGAGTCCTGGCGGTGGTCGCTGA

Peptide Sequence

PEP ID	Os01t0258700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:8659413:8664796:-1 gene:Os01g0258700 transcript:Os01t0258700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 description:Zinc finger, CCCH-type domain containing protein. (Os01t0258700-01);Similar to zinc finger CCCH type domain-containing protein ZFN-like 1. (Os01t0258700-03)
Sequence	MEQPHAAAAAAGGGEGEGGASPDTGLEGPMWRMGLGGGGGGGGGGGGGDGDAAGRLPERP GEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKT GTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPE FGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYIPGSYTPMMLSSGMIPL QGWSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQ EHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCA YYAQNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPIAPYPIGFSIATLAPSSPSPDLRP EYISTKDQSVNQVTSPVAASEPVGSILPKGVFPADTMMRAQTNTTSGGSSSPGGGR

Transcript Sequence

Transcript ID	Os01t0258700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8659413:8664796:-1 gene:Os01g0258700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 description:Zinc finger, CCCH-type domain containing protein. (Os01t0258700-01);Similar to zinc finger CCCH type domain-containing protein ZFN-like 1. (Os01t0258700-03)
Sequence	AGCCACACCACACCAGAGTGGTGGTGGAAGGAAAGGAAACGCGAGAAAGAGAGAGAGAGA GAGGAGAGAGAATAAGAGGAAACAAAACCTCACCCCCGATCTCCTCCTCCTCCCACTCCG ATCGCTCCCCGCCCCGATCGCCGCCGCTGACGCCGACGAAGGCATGGAGCAGCCGCACGC CGCCGCCGCCGCAGCTGGTGGAGGGGAGGGGGAGGGCGGGGCTAGCCCCGACACCGGCCT GGAAGGGCCGATGTGGAGGATGGGGCTGGGAGGAGGAGGCGGGGGAGGTGGAGGTGGAGG AGGAGGGGATGGGGACGCGGCGGGGAGGCTGCCGGAGCGGCCCGGGGAGGAGGACTGTGT CTACTACCTCCGCACCGGCGCGTGCGGCTTCGGTGACCGCTGCCGCTACAACCACCCGCG CGATCGCGGCGGCACTGAGTTTGGTGGAGGTGCAAGGAATGCAGCAGCATTGGATTATCC AGAAAGGGCGGGTCAACCTATATGCGAGTATTACATGAAGACTGGGACTTGCAAATTTGG TACCAATTGCAAATATCACCATCCTAAGCAAGATGGAGCTGTGCTACCTGTTATGTTAAA CAACAGTGGATTCCCTATACGCCTGGGTGAGAAGGAGTGCTCCTACTACATGAAAACTGG GCAATGTAAATTTGGAACTACATGTAAATTCCATCATCCGGAATTCGGTGGTGTTCCGAT GACCCCTGGAATATACCCACCATTACAGTCTCCATCTATAGCTTCCCCTCATCCATATGC TTCTCTTGCAAATTGGCAAATGGGGAGACCACCTGTAGTTCCTGGATCATATATACCAGG CTCATACACCCCAATGATGCTCTCATCTGGAATGATCCCATTGCAAGGATGGAGCCCTTA TCCGGCTTCGGTAAACCCTGTAGTGTCAGGTGGAGCTCAACAAAATGTTCAAGCTGGACC TGTGTACGGCATGGGGCACCATGGATCTTCCTCTACAATTGCTTATGGTGGTCCTTACGT TCCATATGCTTCCTCAACTGGACAATCAAGCAACAATCAACAAGAACATGGATTCCCTGA GCGGCCAGGGCAGCCTGATTGTCAATATTATATGAGAACAGGAGATTGCAAATTTGGAGC TACATGTAAATATCATCACCCCCGAGAGTTGAGTGCACCTAAATCAGGCTATATGGTCAA CTCCCTTTGTCTTCCACTTCGTCCGGGGGCTCAGCCTTGTGCATACTATGCCCAAAATGG GTATTGCAGATATGGAGTTGCATGCAAGTATGATCACCCAATGGGCACGCTTGGCTACAG TCCGTCTGCTTTGCCCCTCTCTGATATGCCAATTGCCCCATATCCTATTGGCTTCTCTAT TGCCACATTGGCTCCGTCTTCGCCTTCCCCGGATTTAAGGCCAGAATACATTTCGACCAA AGACCAATCTGTCAACCAAGTAACATCGCCAGTGGCAGCATCCGAGCCTGTTGGATCAAT ATTGCCGAAAGGGGTTTTCCCAGCAGACACCATGATGCGTGCTCAGACTAACACAACATC TGGTGGTAGCTCGAGTCCTGGCGGTGGTCGCTGATTTTTCTGAGCTGAGAGATCTCAGCA CAATTTTTCAATCACTTGACACAGTTATGATAGGCCCCTCCAATGTGAATAAAAAGCTGT GGCCTCTGTAGAGAAGGCTCGGCGAGGGTGGTGTTTCTCTGCCATCTCAATAAAGCATTC ATAGGTTACAGGCAAGCTCGATTCACTTGCAATTTTTGCGTTCTTCTGTTCTCTGAAACG GGAAAGAAAAGGAAGGTTTTTGAATGTCAGGCTCGATAGTTCTCATCGGCAGTTCGCGGC ACTGGGAGACTCGGATCCATTCCCTCGGTAAATAATTCTCAGGCAAGGAGGTTTATACAT GCAGAAGCTACTGGATTTTGCTCGTCCAGCTTCCGGAGTTCGTCTTTTTCCCTTTTTTTT TTGGTTCTGTATATTGTCATATATTATATATCTATATATTCAACGGACATGAGACTCGAA ACTACATAAGTACATATGTGTCTATACTGGGAGCAAGGCACATTGTAACGGACAAGAGAT GCTTATTTAATGAAAGTCTTGCTGGAATACTGAAATGGTAGTATAGATGAAGTCATTTTC ATGCTTCTGTTATCCTTC