Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0256900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:8570880:8574555:-1 gene:Os01g0256900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SmX6 protein. (Os01t0256900-01)
Sequence

ATGCTTCCGCTCTCGCTCCTCAAGACCGCCCAGGGGCATCCCATGCTCGTGGAGCTTAAG
AACGGCGAGACGTACAACGGGCACTTGGTGAACTGCGACACGTGGATGAACATCCACCTC
CGGGAGGTTATTTGCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGCCAGAATGTTAC
ATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTGACAAGGTCCAG
GAAGAGACTTCAAAGAGCAGATCAGATAGGAGGCCACCAGGTGTAGGCCGCGGAAGAGGA
AGAGGTGATATAGGTACTAAGCCTGGAGGCAGAGGCATTGGGCGTGGCCAGGATGATGGT
GGCAGCAAAGGCGGTGGTGGCCGTGGAAGGGGAGGAATTGGAGGTAAAGGTGGCATCAAA
GGTGGGGGCCGCGGACGTGGGTGA

Peptide Sequence

PEP ID

Os01t0256900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:8570880:8574555:-1 gene:Os01g0256900 transcript:Os01t0256900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SmX6 protein. (Os01t0256900-01)
Sequence

MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETSKSRSDRRPPGVGRGRGRGDIGTKPGGRGIGRGQDDG
GSKGGGGRGRGGIGGKGGIKGGGRGRG

Transcript Sequence

Transcript ID

Os01t0256900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:8570880:8574555:-1 gene:Os01g0256900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SmX6 protein. (Os01t0256900-01)
Sequence

ATTTGGGACACGTGTACATAACTCTTTCGGTCCGGGACCCTCTCTTGTTTTTCTTCGTTG
CTCGCGAGCTCTTCCCCCCTCGCCTCGCCTCCCCACCCAACAAGCCCGCGGCGGCGACTA
GGGTTTTGACCCCCCGGAATCCCCCCTCCTCTCGCCGCCTCCGCCTCCGCCGCCGCCGCC
TTCCTCCCCGCGCCGGCGACGATCTGCTCCTCCTCCCCCGCCGGCATCGCTGTTTCCGGA
TCTAGCGCAAGATGCTTCCGCTCTCGCTCCTCAAGACCGCCCAGGGGCATCCCATGCTCG
TGGAGCTTAAGAACGGCGAGACGTACAACGGGCACTTGGTGAACTGCGACACGTGGATGA
ACATCCACCTCCGGGAGGTTATTTGCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGC
CAGAATGTTACATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTG
ACAAGGTCCAGGAAGAGACTTCAAAGAGCAGATCAGATAGGAGGCCACCAGGTGTAGGCC
GCGGAAGAGGAAGAGGTGATATAGGTACTAAGCCTGGAGGCAGAGGCATTGGGCGTGGCC
AGGATGATGGTGGCAGCAAAGGCGGTGGTGGCCGTGGAAGGGGAGGAATTGGAGGTAAAG
GTGGCATCAAAGGTGGGGGCCGCGGACGTGGGTGAGAGGGAAGGTCACTTGTGGGAATGC
CGCTTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATGGACTGGTG
GAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTC
AGTAGTTACCAGTGAAGAGGCAGCGGTTGGCCTGTCTCGAAACAATTTGTTTGATGTCTG
GACCCTCGACTATATTGAATATTATTGTGGTTATTACTTTGACCTGTTCATCGC