Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0256800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:8560625:8569629:-1 gene:Os01g0256800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 4 description:Similar to zinc finger helicase family protein. (Os01t0256800-01);Hypothetical conserved gene. (Os01t0256800-02)
Sequence	ATGGCGGAGGCGGAGGAGAAGCGGGTGGGGGTGGGGGAGGCGCGGGCGCCGCTCGCCGTG GAGGCGCTCCGGGGGAAGATCGTGGAGAAGGTGAAGGGGAACCGCGTCACTCTCATCGTG GGGGACACCGGATGCGGAAAGAGTTCTATGGTTCCACAGTTCCTCCTGGAAGAAAACATG GAACCCATTCTATGCACGCAGCCAAGGAGGTTTGCAGTAGTAGCCATTGCTCAAATGATT GCCGAATCTCGCAATTGTCAGGTAGGAGAAGAGGTCGGATATCACATAGGACACTCGAAT GTGTCCAATCTCAATTCAAAAAGGTCAAGAATTGTTTTCAAAACAGCTGGTGTTGTATTG GAGCAAATGCGTGACAAGGGCATTGCTGCATTGAACTATAAGGTTATTATTCTCGATGAA ATACATGAAAGGTCAGTGGAATCTGACCTTGTCCTCGCCTGTGTCAAGCAGTTTATGATG AAAAAGAATGACTTGAGGTTGATTTTGATGTCTGCGACTGCTGATATCACAAGATATAAG GATTACTTCAGAGATCTTGGAAGGGGTGAAAGGGTTGAGGTGATTGCCATTCCTAGCAGT CCACGCAGTAGCATTTTTCAGAGAAAAGTCCTATACCTTGAGCAGATTGTTGATATTCTC AAGATGGACTCGGAATCACTATCAACAAAATACTGCTCTGGACCCAACACTGCAGCTGAT GCTGGTCTAAAACCAGATGTGTATGAACTTATTCATAGGTTATTGTTGCATATACACCAA AATGAGCCAGACATTGGGAAGAGTATTTTGGTGTTCCTTCCTACATACTATGCTTTGGAG CAGCAATGGATTCGTCTGCTATCTGCTAGTTCAATGTTCAAAGTACACATTCTCCATCGC AGCATTGACACCGATGAAGCTCTTCAAACTATGAAGGTCTCAAAGTCCTGTCGTAAGGTT ATACTGGCAACAAACATTGCAGAATCATCAGTCACTATTCCAGGAGTTGCTTATGTTATT GACTCCTGTAGATCACTGCAAGTTTATTGGGATCCAATCAGGAAAACAGACTCAGCTGAG CTTGTATGGGTTTCCAAATCTCAGGCTGAACAGCGGAAAGGCAGGACAGGGCGAACCTGT GATGGTCAAATTTATCGCTTGGTAACTGGGCCATTTTATAACAGTTTAACTGATCATGAG TATCCTGCCATTTTAAGATTGTCCTTAAGAGAGCAAGTACTCATGATTTGTTGTGCAGAG TCCAGAGCTATGAACGATCCTCATGTCCTGCTGCAAAAAGTTCTTGACCCGCCAGATTCG GATGTTGTTGAAGATGCATTGGAATCTCTTGTTCAAATTCGTGCTTTAGATAAGCCAACC TCTCCTAGAGGGCGCCATGAGCCAACCTTTTATGGATGTTTGCTTAATAGTTTGCCACTC TCATTTGACGCTTCTGTTCTAGCCCTTAAATTTGGTGATACTGGCTCCATCTGTGAAGGA ATTCTGATAAGCATCATGCTGGACATCCAACCCCTGCCTATCGTCCAACCTTTTGGTCAC CAACAATTGTGCAAAATGTATAGAAACAATTACTTTGAGGAGGAGGGTATCGACCTGCAA ACTGGCAAGAAGGAAGCTGCACTTGTTGGAAATCTTTGTGCATTTCAATTCTGGCAGCGT ATGTTTAAGGACAAGTATCGTCTGGATTGTCTGATAAATGTGGTGAACACTCATGAACCG AAGGCATCTAATGGTTTTGTTGCTAAACCTGAAGATGAGTGGTGTGCATTTCATAACCTT GTGCCAACAGCACTTAACTACATCTCTGAAATTTATGATGATATTATGGGCACACTTCAC CGATTTAGACCTAGTTTTCTTGTGAAAATAAATCCTCCAATGTACCTTCAGCCTTCCGAA TTCCACCACATGTGTCTTCGCCATGAAGTGCTGGAACTAGAGAATGTGAATTCACTTCCA TTAGAAGCTGAGAATTCTCACTTGGATTCACATCGCAGGTGTGCTGCAACCCCTTATGTT TCTCCAGCTGATTTTGGAACCACTACTGTTGTTAAAACACTGAAGACACTTATCAAGGAG ATGAAGACACAATCTGCGGCAGACAGGGTAACTTATAGAGAACTAGTTCATGGTTATGTT CAACCAGCGTTGGAAAATGAGATGTGTGTGTTCTTTCTTAATGGATCTTGTAATCGAGGT GATACATGCCATTTTTCTCATTCTTCTCGTGCTCCAAGACCAATATGCAAGTTCTTCCTC ACATTACAGGGTTGTCGAAATGGTAACTCGTGTTCATTTTCACATGACTCTGGCTCTTTG GTTTCTTCATCTATCACATCTGGAATCTGCTCTCAGGAAAACAGAGCTACTTCAGTATGT TGTAAAAGGTTGCTGCCTGCTGCTGGTGATGGGCATATTCTTGTCATGAATGATAAAAGT TTACAGTTCGCTTGTAAACTTTGTAACTATTATGACCCCACTAAGATTATTGCCTGTACA CCTGGTCCTCATTCATTCGAGTCTGATTCAGTGACTAAGGGCCTCAAGATTCTACAGAAT TTGGCTGATCCCTCTTATCTATTCATTGGAGGTGAACATAAACTATCAGTTCCATGGACA AAATTGAGTCGAGTATTTTGGTTTGCTGATATTGATTCCAACGAATCAATTAGCGAGCAA GTTGTCTTGCAGAAGTTTTTCCAGCATATTGCCATCAAGACCTTGTCAGAAAAGATGTCA GATTTGCAGGTCATCGTGATCATGAATAACGCAAAATTTGTTCAGTTACAGGTCGAAAGA TTGGCAAGAGAGTGCTTCTTATTTCTGGGTGAATCATTTATGTTTGATGAAGCAACTCTT GGATGGTTCTCGGATACCCCTAATTACCCGAGAGGGATGCAAGTATCAGCACCAGTTGCT TACATCTTTAGCATGCATCCTCCTACTGGCATTCAGTTTGGTGATTACGCATCAGAACTG CGCAAAGTTTTATACAGCAACTAG

Peptide Sequence

PEP ID	Os01t0256800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:8560625:8569629:-1 gene:Os01g0256800 transcript:Os01t0256800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 4 description:Similar to zinc finger helicase family protein. (Os01t0256800-01);Hypothetical conserved gene. (Os01t0256800-02)
Sequence	MAEAEEKRVGVGEARAPLAVEALRGKIVEKVKGNRVTLIVGDTGCGKSSMVPQFLLEENM EPILCTQPRRFAVVAIAQMIAESRNCQVGEEVGYHIGHSNVSNLNSKRSRIVFKTAGVVL EQMRDKGIAALNYKVIILDEIHERSVESDLVLACVKQFMMKKNDLRLILMSATADITRYK DYFRDLGRGERVEVIAIPSSPRSSIFQRKVLYLEQIVDILKMDSESLSTKYCSGPNTAAD AGLKPDVYELIHRLLLHIHQNEPDIGKSILVFLPTYYALEQQWIRLLSASSMFKVHILHR SIDTDEALQTMKVSKSCRKVILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRKTDSAE LVWVSKSQAEQRKGRTGRTCDGQIYRLVTGPFYNSLTDHEYPAILRLSLREQVLMICCAE SRAMNDPHVLLQKVLDPPDSDVVEDALESLVQIRALDKPTSPRGRHEPTFYGCLLNSLPL SFDASVLALKFGDTGSICEGILISIMLDIQPLPIVQPFGHQQLCKMYRNNYFEEEGIDLQ TGKKEAALVGNLCAFQFWQRMFKDKYRLDCLINVVNTHEPKASNGFVAKPEDEWCAFHNL VPTALNYISEIYDDIMGTLHRFRPSFLVKINPPMYLQPSEFHHMCLRHEVLELENVNSLP LEAENSHLDSHRRCAATPYVSPADFGTTTVVKTLKTLIKEMKTQSAADRVTYRELVHGYV QPALENEMCVFFLNGSCNRGDTCHFSHSSRAPRPICKFFLTLQGCRNGNSCSFSHDSGSL VSSSITSGICSQENRATSVCCKRLLPAAGDGHILVMNDKSLQFACKLCNYYDPTKIIACT PGPHSFESDSVTKGLKILQNLADPSYLFIGGEHKLSVPWTKLSRVFWFADIDSNESISEQ VVLQKFFQHIAIKTLSEKMSDLQVIVIMNNAKFVQLQVERLARECFLFLGESFMFDEATL GWFSDTPNYPRGMQVSAPVAYIFSMHPPTGIQFGDYASELRKVLYSN

Transcript Sequence

Transcript ID	Os01t0256800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8560625:8569629:-1 gene:Os01g0256800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 4 description:Similar to zinc finger helicase family protein. (Os01t0256800-01);Hypothetical conserved gene. (Os01t0256800-02)
Sequence	GAGGCGAGGAGGAGGAGGAGGAGGGCAAAAGCTTGCAGGAGAAGGCATCCGCATCCGCAT CTGCCGCCGTCGGTGGGGGCGGAGACCGGAGCATGGCGGAGGCGGAGGAGAAGCGGGTGG GGGTGGGGGAGGCGCGGGCGCCGCTCGCCGTGGAGGCGCTCCGGGGGAAGATCGTGGAGA AGGTGAAGGGGAACCGCGTCACTCTCATCGTGGGGGACACCGGATGCGGAAAGAGTTCTA TGGTTCCACAGTTCCTCCTGGAAGAAAACATGGAACCCATTCTATGCACGCAGCCAAGGA GGTTTGCAGTAGTAGCCATTGCTCAAATGATTGCCGAATCTCGCAATTGTCAGGTAGGAG AAGAGGTCGGATATCACATAGGACACTCGAATGTGTCCAATCTCAATTCAAAAAGGTCAA GAATTGTTTTCAAAACAGCTGGTGTTGTATTGGAGCAAATGCGTGACAAGGGCATTGCTG CATTGAACTATAAGGTTATTATTCTCGATGAAATACATGAAAGGTCAGTGGAATCTGACC TTGTCCTCGCCTGTGTCAAGCAGTTTATGATGAAAAAGAATGACTTGAGGTTGATTTTGA TGTCTGCGACTGCTGATATCACAAGATATAAGGATTACTTCAGAGATCTTGGAAGGGGTG AAAGGGTTGAGGTGATTGCCATTCCTAGCAGTCCACGCAGTAGCATTTTTCAGAGAAAAG TCCTATACCTTGAGCAGATTGTTGATATTCTCAAGATGGACTCGGAATCACTATCAACAA AATACTGCTCTGGACCCAACACTGCAGCTGATGCTGGTCTAAAACCAGATGTGTATGAAC TTATTCATAGGTTATTGTTGCATATACACCAAAATGAGCCAGACATTGGGAAGAGTATTT TGGTGTTCCTTCCTACATACTATGCTTTGGAGCAGCAATGGATTCGTCTGCTATCTGCTA GTTCAATGTTCAAAGTACACATTCTCCATCGCAGCATTGACACCGATGAAGCTCTTCAAA CTATGAAGGTCTCAAAGTCCTGTCGTAAGGTTATACTGGCAACAAACATTGCAGAATCAT CAGTCACTATTCCAGGAGTTGCTTATGTTATTGACTCCTGTAGATCACTGCAAGTTTATT GGGATCCAATCAGGAAAACAGACTCAGCTGAGCTTGTATGGGTTTCCAAATCTCAGGCTG AACAGCGGAAAGGCAGGACAGGGCGAACCTGTGATGGTCAAATTTATCGCTTGGTAACTG GGCCATTTTATAACAGTTTAACTGATCATGAGTATCCTGCCATTTTAAGATTGTCCTTAA GAGAGCAAGTACTCATGATTTGTTGTGCAGAGTCCAGAGCTATGAACGATCCTCATGTCC TGCTGCAAAAAGTTCTTGACCCGCCAGATTCGGATGTTGTTGAAGATGCATTGGAATCTC TTGTTCAAATTCGTGCTTTAGATAAGCCAACCTCTCCTAGAGGGCGCCATGAGCCAACCT TTTATGGATGTTTGCTTAATAGTTTGCCACTCTCATTTGACGCTTCTGTTCTAGCCCTTA AATTTGGTGATACTGGCTCCATCTGTGAAGGAATTCTGATAAGCATCATGCTGGACATCC AACCCCTGCCTATCGTCCAACCTTTTGGTCACCAACAATTGTGCAAAATGTATAGAAACA ATTACTTTGAGGAGGAGGGTATCGACCTGCAAACTGGCAAGAAGGAAGCTGCACTTGTTG GAAATCTTTGTGCATTTCAATTCTGGCAGCGTATGTTTAAGGACAAGTATCGTCTGGATT GTCTGATAAATGTGGTGAACACTCATGAACCGAAGGCATCTAATGGTTTTGTTGCTAAAC CTGAAGATGAGTGGTGTGCATTTCATAACCTTGTGCCAACAGCACTTAACTACATCTCTG AAATTTATGATGATATTATGGGCACACTTCACCGATTTAGACCTAGTTTTCTTGTGAAAA TAAATCCTCCAATGTACCTTCAGCCTTCCGAATTCCACCACATGTGTCTTCGCCATGAAG TGCTGGAACTAGAGAATGTGAATTCACTTCCATTAGAAGCTGAGAATTCTCACTTGGATT CACATCGCAGGTGTGCTGCAACCCCTTATGTTTCTCCAGCTGATTTTGGAACCACTACTG TTGTTAAAACACTGAAGACACTTATCAAGGAGATGAAGACACAATCTGCGGCAGACAGGG TAACTTATAGAGAACTAGTTCATGGTTATGTTCAACCAGCGTTGGAAAATGAGATGTGTG TGTTCTTTCTTAATGGATCTTGTAATCGAGGTGATACATGCCATTTTTCTCATTCTTCTC GTGCTCCAAGACCAATATGCAAGTTCTTCCTCACATTACAGGGTTGTCGAAATGGTAACT CGTGTTCATTTTCACATGACTCTGGCTCTTTGGTTTCTTCATCTATCACATCTGGAATCT GCTCTCAGGAAAACAGAGCTACTTCAGTATGTTGTAAAAGGTTGCTGCCTGCTGCTGGTG ATGGGCATATTCTTGTCATGAATGATAAAAGTTTACAGTTCGCTTGTAAACTTTGTAACT ATTATGACCCCACTAAGATTATTGCCTGTACACCTGGTCCTCATTCATTCGAGTCTGATT CAGTGACTAAGGGCCTCAAGATTCTACAGAATTTGGCTGATCCCTCTTATCTATTCATTG GAGGTGAACATAAACTATCAGTTCCATGGACAAAATTGAGTCGAGTATTTTGGTTTGCTG ATATTGATTCCAACGAATCAATTAGCGAGCAAGTTGTCTTGCAGAAGTTTTTCCAGCATA TTGCCATCAAGACCTTGTCAGAAAAGATGTCAGATTTGCAGGTCATCGTGATCATGAATA ACGCAAAATTTGTTCAGTTACAGGTCGAAAGATTGGCAAGAGAGTGCTTCTTATTTCTGG GTGAATCATTTATGTTTGATGAAGCAACTCTTGGATGGTTCTCGGATACCCCTAATTACC CGAGAGGGATGCAAGTATCAGCACCAGTTGCTTACATCTTTAGCATGCATCCTCCTACTG GCATTCAGTTTGGTGATTACGCATCAGAACTGCGCAAAGTTTTATACAGCAACTAGTTAG ACCATTATAGGTTATTTCCACATGTGAATAGCTTTGGTCAAGCCATTTTGCGAACTGTAA TTTTTTGGTCAGTTCAGCTTTTACAGAAGTGTAAGGCTTACTTGAGTGCTATCTGAATTA GAATTCACTAGGGAACTTTAACTGAAGGGATGCTGTTTTAAATGTTGGTTCCGAACTTAA ATTGATGCCAAATTTCCTGAACTGAAAGCTTGTTATGTTAATGTGCAATCCCTTATCATT CCGTAACATCAGTAACTTAACTTTTTTTCATCCTCAACTGTATCATCAAACGTGGCACTG ATGTGGATATGTTTCTTTGACCTCATGGATTTGGTTTATTGACCTCATGGTCATATTCTA ATGAGAAAAGTTTCGTCTG