Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0254900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:8475504:8479452:-1 gene:Os01g0254900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Syntaxin 22 (AtSYP22) (AtVAM3). (Os01t0254900-01)
Sequence	ATGAGCTTCCAGGACCTGGAGGCGGGGAACGCCCGCGGGCTGCCGCGGAGGGGCGGTGGC GGCAGGGCGGGCGCCGCGGCCGCCGGGGCGGGGGCGTCGCAGGCCGTGGCGTCGGGGGTG TTCCAGATCAACACGGCGGTGTCGACGTTCCAGCGGCTGGTCAACACGCTCGGCACGCCC AAGGACACCCCCGACCTCCGCGAGAGGATACACAAGACACGTCAACACATAACACAACTG GTGAAGGACACATCGGAGAAGCTTAAACAAGCTAGCGAGGCTGATCATCGTGTCGAAGTC AGCGCCAGCAAAAAGATTGCTGATGCGAAGCTAGCAAAGGATTTCCAAGCAGTTCTGAAA GAATTTCAGAAAGCTCAACGGTTAGCGGTAGAAAGAGAAGCTGCTTATGCACCCTTCATT TCTCAAGCGGGCTTGCCACAAAGCTATAACTCGAGCGAGGTGAACAATGGTGCTGATAAG TTGGCTGAGCAACGCACGGCGCTTCTAGAATCAAGAAGGCAAGAATTAGTCTTCTTGGAT AATGAGATCGTGTTCAATGAGGCCGTCATTGAGGAGAGGGATCAGGGAATACAAGAAATT CAGCACCAAATTACTGAAGTAAATGAAATCTTCAAAGATCTTGCTGTTCTAGTCCACGAT CAAGGACAAATGATTGATGACATTGACACCCATATCGAGAATGCTGTTATAGCGACTACA CAAGCAAAAGGCCAACTCTCTAAGGCTGCTAAAACTCAGAAGTCGAACTCTTCGCTGATA TGCTTGTTGCTGGTTATATTCGGGGTGGTCCTGCTCATAGTGATAATCGTCCTCGCAGCC TAG

Peptide Sequence

PEP ID	Os01t0254900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:8475504:8479452:-1 gene:Os01g0254900 transcript:Os01t0254900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Syntaxin 22 (AtSYP22) (AtVAM3). (Os01t0254900-01)
Sequence	MSFQDLEAGNARGLPRRGGGGRAGAAAAGAGASQAVASGVFQINTAVSTFQRLVNTLGTP KDTPDLRERIHKTRQHITQLVKDTSEKLKQASEADHRVEVSASKKIADAKLAKDFQAVLK EFQKAQRLAVEREAAYAPFISQAGLPQSYNSSEVNNGADKLAEQRTALLESRRQELVFLD NEIVFNEAVIEERDQGIQEIQHQITEVNEIFKDLAVLVHDQGQMIDDIDTHIENAVIATT QAKGQLSKAAKTQKSNSSLICLLLVIFGVVLLIVIIVLAA

Transcript Sequence

Transcript ID	Os01t0254900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8475504:8479452:-1 gene:Os01g0254900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Syntaxin 22 (AtSYP22) (AtVAM3). (Os01t0254900-01)
Sequence	CCCCAATTCCAGACGCCAACGCGAGGTCGACGAAGGCCACGTCTCCGACTCCGGCTCGAT TTCCACCCCCCCCAAATCCTCCTCCGGCGAGCGGCCGGCCGCGAGACACCCCGGACTCTC CCGCGCGGCGATTCTTCGGTACCCCGATCGGAGGAGGAGGCGGCGGGGAGGGAGGAGGAG GATGAGCTTCCAGGACCTGGAGGCGGGGAACGCCCGCGGGCTGCCGCGGAGGGGCGGTGG CGGCAGGGCGGGCGCCGCGGCCGCCGGGGCGGGGGCGTCGCAGGCCGTGGCGTCGGGGGT GTTCCAGATCAACACGGCGGTGTCGACGTTCCAGCGGCTGGTCAACACGCTCGGCACGCC CAAGGACACCCCCGACCTCCGCGAGAGGATACACAAGACACGTCAACACATAACACAACT GGTGAAGGACACATCGGAGAAGCTTAAACAAGCTAGCGAGGCTGATCATCGTGTCGAAGT CAGCGCCAGCAAAAAGATTGCTGATGCGAAGCTAGCAAAGGATTTCCAAGCAGTTCTGAA AGAATTTCAGAAAGCTCAACGGTTAGCGGTAGAAAGAGAAGCTGCTTATGCACCCTTCAT TTCTCAAGCGGGCTTGCCACAAAGCTATAACTCGAGCGAGGTGAACAATGGTGCTGATAA GTTGGCTGAGCAACGCACGGCGCTTCTAGAATCAAGAAGGCAAGAATTAGTCTTCTTGGA TAATGAGATCGTGTTCAATGAGGCCGTCATTGAGGAGAGGGATCAGGGAATACAAGAAAT TCAGCACCAAATTACTGAAGTAAATGAAATCTTCAAAGATCTTGCTGTTCTAGTCCACGA TCAAGGACAAATGATTGATGACATTGACACCCATATCGAGAATGCTGTTATAGCGACTAC ACAAGCAAAAGGCCAACTCTCTAAGGCTGCTAAAACTCAGAAGTCGAACTCTTCGCTGAT ATGCTTGTTGCTGGTTATATTCGGGGTGGTCCTGCTCATAGTGATAATCGTCCTCGCAGC CTAGGCAGCAGCCTGGAAGAACATGGGACTCCTAGATCTGGTTGAGCTTAGAGCGAAGTA TTCCTTCCTGATTTAATTTTGCTGTGAAGTCGGGAATGTATCCTGATCTCCTGCCTGGAG GAGGGGGTTGCGTTCTGGTCTTGTGCCATGGTGGTGTATGTGATGATGAATGGTGTGTCT GGAATGCATGGTTTATATATAAGTAATTAAGTATAATCGCTTGGTGTCACTCTAGTGCCT CCTGCCTTGCTCGCTCGCCCCTGTTTATATCTTGTGATGTATCGTTGAGTGAGTGTTGTA AGAACGAGGAGTTTGGTCTTTGCATTATAATAGTTGCTTAAGTTGGTCAGTAACCGTCGC AATTTGTTG