Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0253900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:8404250:8408353:1 gene:Os01g0253900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os01t0253900-01);Lipase, class 3 family protein. (Os01t0253900-02)
Sequence	ATGGCGGACGCCGAAGCCGCGGGAGTCACCGGAGCCGCTCGAGAAGGCGGCCAGGAAGCG CTCACGGCGGGCCGCGACGGCGACGAGTGCTGCGCCTCGTGCGGTGGAGGTGACGACGAA GGATGCTGCGGCGTCGAGGAGGACGACGAGAGCGACGGCAAGGTGTTCGACCGCGCGACC TTCTCGAGGCTCCTCAGGAAAGTGTCGCTCGGGGAGGCCAAGGAGTTCTCCAAGATGTCC TACCTCTGCAACATCGCCTACATGATCCCCAAGATCACGCCAAAATTGCTGCGGAGGTAC AATTTGCGGTTTGTGACTTCATCAGTACAAGAGAAAGCCAAAACTGGTGTTGATCAGAAG CAGGAGCTGAAGACTGAGGAAGGTGAATCTTCAGATCAAGAATCTGAAGTTGTAGAGAAC CCTGAGCCAGGGAGCAATAAGAAGAAAGAAAGTGGGTTGGGGGTAAACCCCTTCGGCGCA TACCATGTCATGTCGTCTGCTGCCTCTTATTTACATTCACGGGCTATGGGCGTCGTTCCC TTTGGTTCCAGGAATGATGGCAAGAACGATCCAACCATCATGGCCATTGTAAACGGTGAG AGTGGTGAAGGTTTAACCATGGATGAAGCTTCATTTGTGGCCACTACAAATTCAGTTACC TCCATGGTTGCTGCCAAGGAAGAAACAAGACAAGCTGTTGCAGATGATCTGAACTCTTCA AGATCTTGTCCTTGCGAATGGTTCATTTGTGATGATGATCAAGGCAGCACAAGATACTTT GTGGTTCAGGGCTCGGAGTCAATCGCTTCTTGGCAGGCCAACCTCCTATTTGAACCAGTT AAATTTGAGGGACTCGATGTGCTCGTTCATAGGGGAATATATGAAGCAGCCAAGGGAATG TATCACCAAATGTTGCCATATGTCAAATCTCACTTGAGAAGTTCTGGTAAATCTGCAACG TTACGCTTCACTGGTCATTCTCTTGGTGGTAGTCTGGCTTTGCTTGTGAATCTAATGCTA CTGATGAGAGGAGCAGCACCTGCTTCGTCGTTGTTGCCTGTAATAACATTTGGTGCACCA TGCATCATGTGTGGCGGTGACCACTTGCTTCGTAAACTTGGATTGCCAAGGAATCATGTT CAGTCAGTCACGATGCATCGAGATATTGTTCCTCGAGTCTTTTCGTGCAACTACCCTGAC CATGTTGCTAATATTCTGAAACTAGCCAATGGGAATTTCCGCAGTCACCCATGCCTCACA AATCAGAAGCTCTTGTACGCCCCAATGGGCGAGATGTTCATCCTGCAACCTGACAAGAGG CTATCCCCGCACCACGACCTCCTCCCGCCGGACAGCGGCATCTACCACCTGAGCGACTCG TCGTCGTCGTCGGGCACCTCCCTGCGGCGGCTCCGGTCCGCCATGTCCACCTTCTTCAAC TCGCCGCACCCGCTCGAGATCCTCAAGGACAAGAGCGCCTACGGCCCCAAGGGCGCCGTG TACCGCGACCACGACGTGAACTCCTACCTCCGCTCCGTCCGGGCCGTGGTGCGCAAGGAG GTGCGGCGGCACCGGGAGACGCGGCGGGGGCGGTGGCGGCGGCTCCTCCTGTGGTGGCCG CTCGGCGCGCACGGCGCGCTGGCCGGCGCCGGCGTGCTCCTGGACGCCGCCGTGGAGGGC GGGAGGGAGACGGCGAGGCAGGCGCGGGCGCACGCCCGGCTGCTCGTCGTCCTGCTGGTG CCGGCGAAGCTGCTCGTGATCGGAGCCTTCCTGGTCGTCAGATTGATGTGA

Peptide Sequence

PEP ID	Os01t0253900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:8404250:8408353:1 gene:Os01g0253900 transcript:Os01t0253900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os01t0253900-01);Lipase, class 3 family protein. (Os01t0253900-02)
Sequence	MADAEAAGVTGAAREGGQEALTAGRDGDECCASCGGGDDEGCCGVEEDDESDGKVFDRAT FSRLLRKVSLGEAKEFSKMSYLCNIAYMIPKITPKLLRRYNLRFVTSSVQEKAKTGVDQK QELKTEEGESSDQESEVVENPEPGSNKKKESGLGVNPFGAYHVMSSAASYLHSRAMGVVP FGSRNDGKNDPTIMAIVNGESGEGLTMDEASFVATTNSVTSMVAAKEETRQAVADDLNSS RSCPCEWFICDDDQGSTRYFVVQGSESIASWQANLLFEPVKFEGLDVLVHRGIYEAAKGM YHQMLPYVKSHLRSSGKSATLRFTGHSLGGSLALLVNLMLLMRGAAPASSLLPVITFGAP CIMCGGDHLLRKLGLPRNHVQSVTMHRDIVPRVFSCNYPDHVANILKLANGNFRSHPCLT NQKLLYAPMGEMFILQPDKRLSPHHDLLPPDSGIYHLSDSSSSSGTSLRRLRSAMSTFFN SPHPLEILKDKSAYGPKGAVYRDHDVNSYLRSVRAVVRKEVRRHRETRRGRWRRLLLWWP LGAHGALAGAGVLLDAAVEGGRETARQARAHARLLVVLLVPAKLLVIGAFLVVRLM

Transcript Sequence

Transcript ID	Os01t0253900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8404250:8408353:1 gene:Os01g0253900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os01t0253900-01);Lipase, class 3 family protein. (Os01t0253900-02)
Sequence	GGATTTTTCTTCACGGTTTCTCTCTCCTCCCCCACAAACAATCCCACCCCTCTCTTTCCT CTCTCCTACCTCCCTCCCATGGCGGACGCCGAAGCCGCGGGAGTCACCGGAGCCGCTCGA GAAGGCGGCCAGGAAGCGCTCACGGCGGGCCGCGACGGCGACGAGTGCTGCGCCTCGTGC GGTGGAGGTGACGACGAAGGATGCTGCGGCGTCGAGGAGGACGACGAGAGCGACGGCAAG GTGTTCGACCGCGCGACCTTCTCGAGGCTCCTCAGGAAAGTGTCGCTCGGGGAGGCCAAG GAGTTCTCCAAGATGTCCTACCTCTGCAACATCGCCTACATGATCCCCAAGATCACGCCA AAATTGCTGCGGAGGTACAATTTGCGGTTTGTGACTTCATCAGTACAAGAGAAAGCCAAA ACTGGTGTTGATCAGAAGCAGGAGCTGAAGACTGAGGAAGGTGAATCTTCAGATCAAGAA TCTGAAGTTGTAGAGAACCCTGAGCCAGGGAGCAATAAGAAGAAAGAAAGTGGGTTGGGG GTAAACCCCTTCGGCGCATACCATGTCATGTCGTCTGCTGCCTCTTATTTACATTCACGG GCTATGGGCGTCGTTCCCTTTGGTTCCAGGAATGATGGCAAGAACGATCCAACCATCATG GCCATTGTAAACGGTGAGAGTGGTGAAGGTTTAACCATGGATGAAGCTTCATTTGTGGCC ACTACAAATTCAGTTACCTCCATGGTTGCTGCCAAGGAAGAAACAAGACAAGCTGTTGCA GATGATCTGAACTCTTCAAGATCTTGTCCTTGCGAATGGTTCATTTGTGATGATGATCAA GGCAGCACAAGATACTTTGTGGTTCAGGGCTCGGAGTCAATCGCTTCTTGGCAGGCCAAC CTCCTATTTGAACCAGTTAAATTTGAGGGACTCGATGTGCTCGTTCATAGGGGAATATAT GAAGCAGCCAAGGGAATGTATCACCAAATGTTGCCATATGTCAAATCTCACTTGAGAAGT TCTGGTAAATCTGCAACGTTACGCTTCACTGGTCATTCTCTTGGTGGTAGTCTGGCTTTG CTTGTGAATCTAATGCTACTGATGAGAGGAGCAGCACCTGCTTCGTCGTTGTTGCCTGTA ATAACATTTGGTGCACCATGCATCATGTGTGGCGGTGACCACTTGCTTCGTAAACTTGGA TTGCCAAGGAATCATGTTCAGTCAGTCACGATGCATCGAGATATTGTTCCTCGAGTCTTT TCGTGCAACTACCCTGACCATGTTGCTAATATTCTGAAACTAGCCAATGGGAATTTCCGC AGTCACCCATGCCTCACAAATCAGAAGCTCTTGTACGCCCCAATGGGCGAGATGTTCATC CTGCAACCTGACAAGAGGCTATCCCCGCACCACGACCTCCTCCCGCCGGACAGCGGCATC TACCACCTGAGCGACTCGTCGTCGTCGTCGGGCACCTCCCTGCGGCGGCTCCGGTCCGCC ATGTCCACCTTCTTCAACTCGCCGCACCCGCTCGAGATCCTCAAGGACAAGAGCGCCTAC GGCCCCAAGGGCGCCGTGTACCGCGACCACGACGTGAACTCCTACCTCCGCTCCGTCCGG GCCGTGGTGCGCAAGGAGGTGCGGCGGCACCGGGAGACGCGGCGGGGGCGGTGGCGGCGG CTCCTCCTGTGGTGGCCGCTCGGCGCGCACGGCGCGCTGGCCGGCGCCGGCGTGCTCCTG GACGCCGCCGTGGAGGGCGGGAGGGAGACGGCGAGGCAGGCGCGGGCGCACGCCCGGCTG CTCGTCGTCCTGCTGGTGCCGGCGAAGCTGCTCGTGATCGGAGCCTTCCTGGTCGTCAGA TTGATGTGATTCGCGGACGTGGTTAGATCCCATCCATCCGTTCATTCATTTTGTTGGTTT ACACACCACACTGCTGCAGTGCTGCTGTATGCTACTGCAGCAATGATTCTTTCTTCCCAG AGTGGAATGCCATACAAGTGTCACACCCAGATGCTGATTTTCTGTTTTGACACTAAAAAA AGAAGGACCTCAGATAGATGAAGATCAAATGTCAATTAATTAGACTCTAAACTATATTAG AAATTTATTAATTGGACTCAGG