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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0253600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:8396551:8398584:-1 gene:Os01g0253600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Replication protein A 14kDa subunit, replication protein A 14kDa, single-stranded DNA binding complex subunit 3 description:Replication factor A protein 3 domain containing protein. (Os01t0253600-01)
Sequence

ATGGATACATCAGGACCTGCAGCATTCGTCAATGGAGAGATTCTGAAGATGTTCGTCGGC
CGAAGAGTGCGCACGGTGGTCCAAGCCCAGCGCGAGGAAGGCGGGTTGCTTATCGGGCAG
TCCACCGATGGTCATCAGCTAACCATCAAAGGGGCCTCCGGTGCCCCTATGTCGCACTAT
GTGGAGATTATTGGGATCGCTGAACCCAATCAGGCCATCCGGGCTGAAGTTTGCACAGAT
TTTGGTGAAAACTTCGATCCTGCACCATTCAATGGACTGTGCAAGCTTGCGAATGGCCAG
ATGAAGGATTTGTTCCTGTAG

Peptide Sequence

PEP ID

Os01t0253600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:8396551:8398584:-1 gene:Os01g0253600 transcript:Os01t0253600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Replication protein A 14kDa subunit, replication protein A 14kDa, single-stranded DNA binding complex subunit 3 description:Replication factor A protein 3 domain containing protein. (Os01t0253600-01)
Sequence

MDTSGPAAFVNGEILKMFVGRRVRTVVQAQREEGGLLIGQSTDGHQLTIKGASGAPMSHY
VEIIGIAEPNQAIRAEVCTDFGENFDPAPFNGLCKLANGQMKDLFL

Transcript Sequence

Transcript ID

Os01t0253600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:8396551:8398584:-1 gene:Os01g0253600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Replication protein A 14kDa subunit, replication protein A 14kDa, single-stranded DNA binding complex subunit 3 description:Replication factor A protein 3 domain containing protein. (Os01t0253600-01)
Sequence

AGACCCTCTCCTGCTGCGTGCGTCCCCAAATCAGGAGTCCTCCCAACCCTCGCCACCGGC
GCCGTCCGCCCCATCTCCGACGCCGCCTCCCCCCGAAGCGAAGCAGAGATGGATACATCA
GGACCTGCAGCATTCGTCAATGGAGAGATTCTGAAGATGTTCGTCGGCCGAAGAGTGCGC
ACGGTGGTCCAAGCCCAGCGCGAGGAAGGCGGGTTGCTTATCGGGCAGTCCACCGATGGT
CATCAGCTAACCATCAAAGGGGCCTCCGGTGCCCCTATGTCGCACTATGTGGAGATTATT
GGGATCGCTGAACCCAATCAGGCCATCCGGGCTGAAGTTTGCACAGATTTTGGTGAAAAC
TTCGATCCTGCACCATTCAATGGACTGTGCAAGCTTGCGAATGGCCAGATGAAGGATTTG
TTCCTGTAGAGGTCGGCATCACATACAAGACATTCTGCCAACAAAGCATGTCTCATGTTC
ATGATTTCTCTAGCTTTAAGATCCGTCCAACTGTTTTTGTCAGTCATCTCAGTATAATCA
AGCTACTTAGGGTCAGTATTGGTGCTTATTAAGACATATTAACCTTAAGCTATGTGAGGA
CAAGCGTGTGCTTTTGTTGCTGAAGAGCTTGTGGTGTTTGCTCCTTCTAAGCAAAGCAAA
CCAAAGCGTTGTGCTGCATTGTTACTGTCGCTTGCATTTGGATCCTTGAAAGCTGTGTTT
CTTGTT