Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0253500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:8394453:8395607:1 gene:Os01g0253500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0253500-01)
Sequence

ATGCTGAGCCACGCCCACGCCGCCGCCGGGAGCCCCGCCGCCACGGCGCCGTCAAGCCCC
ACGCGCCGCCGCTGCGCCGGGAAGGACGACGTCGACGACGCTGACGATGACGGCGGCGGC
AGCGAGCAGTTCTTCTTCTTCAGCGCCCCGGCCAGCCCCGTGCACTACATCCTCCGCTCG
CCGCCGTCCTCCACGACGACGACGACGGCGGCGGCGGCGCACTATGCTCCGGGCGTGGAC
GGTGACCACGGATGCGGCGGCGGCGGCGGCGGGGACTTCGAGTTCGCCGCGCGCCAGCAT
GGTGCAGGGAATGGCGCCGCGGCGATGAGCTCGGCCGAGGAGCTGTTCGTCGCGGGGCGC
ATCCGCGTCGGGTGCCTCTCGCCCATACGCCAGGAGGAGGCGGGCTTCGGGGAGCAGGAG
GAAGGTTGCGTCGACGAGGGGGAGAGCGGCGGCCAACGGCCGCCGCCTCGCCGGGCCAGA
TCGGCGTCGCCGCCGCGGAGCCCGCATCTCGCCAAGATCGCCGAGCCCTCGGACTCCTTC
GCGTCGTCGTCGTCTTCCTCCACCTCCACCTCCTCCTCCTCCTCCTCCTCGTCCTCCGCC
AAGAGCACTCGCCGGCGGATATCGCTGCGTGACCTCCTCCTCGGCAGCACGGCGAACAGC
GACTCCGCCACCGCCGCCGCCGCCGCCGAGAGGTCATCGGGCTTTTGGCCCCCGTCCATC
TGGCCGTCGTCGCGGTCCAAGAAGACAGCAACGCTAGCGTTGCCCTGCCCGTGCCCGTGC
CCGCCGTCGCTGCAGCCGGCGCGGCGGTCCACCTCGTCGGAGAGGTCGTCGGCGCCGCCG
CCGCGGCGGCGCGCGACGTCGCTGCCGTACCGGCAGGGCCTCGTCCTCGGATGCCTCGGG
TTCGGGGCCCGGAGCTACGGGCTTGCCAAGTCAATGCATCCGCTTTCCTCTGGGTAA

Peptide Sequence

PEP ID

Os01t0253500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:8394453:8395607:1 gene:Os01g0253500 transcript:Os01t0253500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0253500-01)
Sequence

MLSHAHAAAGSPAATAPSSPTRRRCAGKDDVDDADDDGGGSEQFFFFSAPASPVHYILRS
PPSSTTTTTAAAAHYAPGVDGDHGCGGGGGGDFEFAARQHGAGNGAAAMSSAEELFVAGR
IRVGCLSPIRQEEAGFGEQEEGCVDEGESGGQRPPPRRARSASPPRSPHLAKIAEPSDSF
ASSSSSSTSTSSSSSSSSSAKSTRRRISLRDLLLGSTANSDSATAAAAAERSSGFWPPSI
WPSSRSKKTATLALPCPCPCPPSLQPARRSTSSERSSAPPPRRRATSLPYRQGLVLGCLG
FGARSYGLAKSMHPLSSG

Transcript Sequence

Transcript ID

Os01t0253500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:8394453:8395607:1 gene:Os01g0253500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0253500-01)
Sequence

GCTTACCCACGTCTCCTTCAAAATCTCGCCTCGCCTTCCCTTCCCTTCACTCCGCCGCCG
CCGCCGATGCTGAGCCACGCCCACGCCGCCGCCGGGAGCCCCGCCGCCACGGCGCCGTCA
AGCCCCACGCGCCGCCGCTGCGCCGGGAAGGACGACGTCGACGACGCTGACGATGACGGC
GGCGGCAGCGAGCAGTTCTTCTTCTTCAGCGCCCCGGCCAGCCCCGTGCACTACATCCTC
CGCTCGCCGCCGTCCTCCACGACGACGACGACGGCGGCGGCGGCGCACTATGCTCCGGGC
GTGGACGGTGACCACGGATGCGGCGGCGGCGGCGGCGGGGACTTCGAGTTCGCCGCGCGC
CAGCATGGTGCAGGGAATGGCGCCGCGGCGATGAGCTCGGCCGAGGAGCTGTTCGTCGCG
GGGCGCATCCGCGTCGGGTGCCTCTCGCCCATACGCCAGGAGGAGGCGGGCTTCGGGGAG
CAGGAGGAAGGTTGCGTCGACGAGGGGGAGAGCGGCGGCCAACGGCCGCCGCCTCGCCGG
GCCAGATCGGCGTCGCCGCCGCGGAGCCCGCATCTCGCCAAGATCGCCGAGCCCTCGGAC
TCCTTCGCGTCGTCGTCGTCTTCCTCCACCTCCACCTCCTCCTCCTCCTCCTCCTCGTCC
TCCGCCAAGAGCACTCGCCGGCGGATATCGCTGCGTGACCTCCTCCTCGGCAGCACGGCG
AACAGCGACTCCGCCACCGCCGCCGCCGCCGCCGAGAGGTCATCGGGCTTTTGGCCCCCG
TCCATCTGGCCGTCGTCGCGGTCCAAGAAGACAGCAACGCTAGCGTTGCCCTGCCCGTGC
CCGTGCCCGCCGTCGCTGCAGCCGGCGCGGCGGTCCACCTCGTCGGAGAGGTCGTCGGCG
CCGCCGCCGCGGCGGCGCGCGACGTCGCTGCCGTACCGGCAGGGCCTCGTCCTCGGATGC
CTCGGGTTCGGGGCCCGGAGCTACGGGCTTGCCAAGTCAATGCATCCGCTTTCCTCTGGG
TAAAAGCGTAAACGCGAAAACCCGCCTTCAAAGGGAAAACTACCAAATCGCCACATTTTG
AAGTTCAAATAGCACTTTACGTAATCTTGCGAGGGCTTGCATGAAAAAAGAAAAGGAAAA
CAAAGGATGTAAATT