Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0253300-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:8382155:8387231:1 gene:Os01g0253300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IMPORTIN ALPHA 1A description:Importin alpha-1a subunit. (Os01t0253300-01);Importin alpha-1a subunit. (Os01t0253300-02)
Sequence	ATGTCGCTGCGCCCGAGCGAGCGGGTGGAGGTGCGGCGGAACCGCTACAAGGTGGCGGTG GACGCCGAGGAGGGGAGGCGGCGGCGCGAGGACAACATGGTGGAGATCCGCAAGAGCCGC CGCGAGGAGAGCCTCCTCAAGAAGCGCCGCGAGGGGCTCCAGGCCCAGGCCCCCGTCCCC GCCTCCGCCGCAACCGGCGTCGATAAGAAGCTCGAAAGCCTTCCTGCTATGATTGGTGGA GTTTATTCGGACGATAACAACCTTCAGCTTGAGGCCACAACACAGTTCCGCAAGTTGCTT TCTATAGAGAGGAGCCCTCCAATTGAAGAGGTTATTCAATCAGGCGTTGTTCCTAGATTC GTGCAGTTTCTTACCAGAGAGGATTTCCCCCAGCTACAGTTCGAAGCTGCGTGGGCACTT ACAAACATTGCATCTGGCACTTCGGAGAATACAAAGGTTGTCATTGATCATGGGGCTGTA CCAATATTTGTGAAGCTTCTTGGTTCTTCTAGTGATGATGTTCGTGAGCAGGCTGTATGG GCATTGGGCAATGTTGCTGGTGATTCCCCTAAGTGCCGTGACCTTGTTCTTGCCAATGGT GCATTGCTGCCTCTGCTAGCACAGTTGAATGAGCACACTAAACTCTCTATGCTAAGGAAT GCAACTTGGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGACT AGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGGAAGTTCTCACT GATGCGTGCTGGGCTCTTTCATATTTATCTGATGGCACTAATGACAAGATCCAAGCCGTG ATTGAAGCTGGTGTTTGCCCCCGTCTTGTGGAGCTTCTCCTCCATCCATCACCTTCAGTG CTTATACCCGCACTACGAACTGTTGGAAATATTGTAACTGGAGATGACGCGCAAACTCAG TGCATCATTGATCATCAAGCCCTCCCTTGCCTCCTAAGTCTGTTGACACAAAATCTCAAG AAAAGCATCAAGAAAGAGGCTTGCTGGACTATTTCAAATATTACTGCTGGTAACAAAGAT CAGATACAGGCTGTCATAAATGCTGGCATTATTGGTCCTCTGGTGAATCTGCTCCAAACG GCAGAGTTCGATATCAAGAAGGAAGCTGCATGGGCCATCTCAAATGCTACTTCAGGCGGT AGCCATGATCAAATCAAGTATCTGGTGAGCGAGGGCTGCATCAAGCCATTGTGTGATCTT CTTATTTGCCCAGATATAAGAATCGTTACAGTTTGTTTGGAGGGTCTCGAGAACATTCTT AAAGTAGGAGAAACCGACAAGACCTTGGCTGCAGGTGATGTGAATGTCTTTTCCCAGATG ATTGATGAAGCGGAAGGTTTGGAAAAGATTGAGAACTTGCAGAGCCATGATAACAATGAG ATCTATGAAAAAGCTGTGAAGATTCTTGAGGCCTACTGGATGGATGAGGAGGATGATACA ATGGGAGCTACCACGGTAGCTGCTCCCCAAGGTGCTACTTTTGACTTTGGCCAAGGCGGT GGTGCTGCTCAATTCAAATAA

Peptide Sequence

PEP ID	Os01t0253300-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:8382155:8387231:1 gene:Os01g0253300 transcript:Os01t0253300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IMPORTIN ALPHA 1A description:Importin alpha-1a subunit. (Os01t0253300-01);Importin alpha-1a subunit. (Os01t0253300-02)
Sequence	MSLRPSERVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVP ASAATGVDKKLESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRF VQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVW ALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQT RPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSV LIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKD QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDL LICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNE IYEKAVKILEAYWMDEEDDTMGATTVAAPQGATFDFGQGGGAAQFK

Transcript Sequence

Transcript ID	Os01t0253300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8382155:8387231:1 gene:Os01g0253300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IMPORTIN ALPHA 1A description:Importin alpha-1a subunit. (Os01t0253300-01);Importin alpha-1a subunit. (Os01t0253300-02)
Sequence	GGTTTCTCCTCCTCTTTCCTCTCCTCCTCCGCCCCGACGCCTCGCTAGGGTTTTTGCCTC TCCCTCCGCCGCCGCCGCTGCCGCGAGGAGAGGAGGGGGGGAGAGCACCCAGCCGGCGAG CCAGCCATGTCGCTGCGCCCGAGCGAGCGGGTGGAGGTGCGGCGGAACCGCTACAAGGTG GCGGTGGACGCCGAGGAGGGGAGGCGGCGGCGCGAGGACAACATGGTGGAGATCCGCAAG AGCCGCCGCGAGGAGAGCCTCCTCAAGAAGCGCCGCGAGGGGCTCCAGGCCCAGGCCCCC GTCCCCGCCTCCGCCGCAACCGGCGTCGATAAGAAGCTCGAAAGCCTTCCTGCTATGATT GGTGGAGTTTATTCGGACGATAACAACCTTCAGCTTGAGGCCACAACACAGTTCCGCAAG TTGCTTTCTATAGAGAGGAGCCCTCCAATTGAAGAGGTTATTCAATCAGGCGTTGTTCCT AGATTCGTGCAGTTTCTTACCAGAGAGGATTTCCCCCAGCTACAGTTCGAAGCTGCGTGG GCACTTACAAACATTGCATCTGGCACTTCGGAGAATACAAAGGTTGTCATTGATCATGGG GCTGTACCAATATTTGTGAAGCTTCTTGGTTCTTCTAGTGATGATGTTCGTGAGCAGGCT GTATGGGCATTGGGCAATGTTGCTGGTGATTCCCCTAAGTGCCGTGACCTTGTTCTTGCC AATGGTGCATTGCTGCCTCTGCTAGCACAGTTGAATGAGCACACTAAACTCTCTATGCTA AGGAATGCAACTTGGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAA CAGACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGGAAGTT CTCACTGATGCGTGCTGGGCTCTTTCATATTTATCTGATGGCACTAATGACAAGATCCAA GCCGTGATTGAAGCTGGTGTTTGCCCCCGTCTTGTGGAGCTTCTCCTCCATCCATCACCT TCAGTGCTTATACCCGCACTACGAACTGTTGGAAATATTGTAACTGGAGATGACGCGCAA ACTCAGTGCATCATTGATCATCAAGCCCTCCCTTGCCTCCTAAGTCTGTTGACACAAAAT CTCAAGAAAAGCATCAAGAAAGAGGCTTGCTGGACTATTTCAAATATTACTGCTGGTAAC AAAGATCAGATACAGGCTGTCATAAATGCTGGCATTATTGGTCCTCTGGTGAATCTGCTC CAAACGGCAGAGTTCGATATCAAGAAGGAAGCTGCATGGGCCATCTCAAATGCTACTTCA GGCGGTAGCCATGATCAAATCAAGTATCTGGTGAGCGAGGGCTGCATCAAGCCATTGTGT GATCTTCTTATTTGCCCAGATATAAGAATCGTTACAGTTTGTTTGGAGGGTCTCGAGAAC ATTCTTAAAGTAGGAGAAACCGACAAGACCTTGGCTGCAGGTGATGTGAATGTCTTTTCC CAGATGATTGATGAAGCGGAAGGTTTGGAAAAGATTGAGAACTTGCAGAGCCATGATAAC AATGAGATCTATGAAAAAGCTGTGAAGATTCTTGAGGCCTACTGGATGGATGAGGAGGAT GATACAATGGGAGCTACCACGGTAGCTGCTCCCCAAGGTGCTACTTTTGACTTTGGCCAA GGCGGTGGTGCTGCTCAATTCAAATAAATACAGATTTGACCAGAGGTGGTAAATTGTGGC CACTGTGCGGGGTACTGAATTGTTCTGGTGGTTCAATAAGCTAAAGGTTTCAAGGGGGCC AGTGTTACATTATTTCCCTACTGGTCACGGATATCATATCACTACGTCTGTAACAGGGAT TAAAGCTTTGAAGTCTGCGTTTTTCATCAGGCTACTACTATGTAGTGTTTGCATCTTTTA GTATGGTGTGCAACATTTTGCTACTTGTATAGCCTGAGTCGAAGCTTCTGCAAAGCCGTC ACAACACATTCCTGAACCCGTCTGGTTTTGAGTTTCGTCAGGAGTGTGCTGAGTTGCAGT TTGTCCGGACATGTAAACCATTATGCCTTTTAAATTATATATTGCTAGGGTTTGTTCGGT TCT