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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0249700-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:8229331:8229903:1 gene:Os01g0249700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal-associated domain, HMA domain containing protein. (Os01t0249700-00)
Sequence

CTGTATCCTGTCAATTTGACACAATTTTTGCAGAAGACGGTGATCAGAGCCGATCTCATC
GGCAGAAGCTGCAAGAAAGACATCTTGCATGCTGTCTCCACGCTACAAGGGATCAAGTCG
ATGGACATCGACGAGGAGAAGTGCACGCTGACGGTGCTGGGCCCCGTGGACCCGGTGAAG
ATCGTGCACCGGCTGAAGAAGAAGTGCTTCGCGGCGGCGGTCGTCAGCGTCGAGGACGAC
AAGCCCAAGGAGCCGGATCCGCCGGCGCCGGAGAAGAAGAAGGAGGACGACGATGATCCG
TGCCAGTGCCAGTGCAAGGAGGCGGAGTGCGCCTGCGTGAAGGTGTGCGCGGCGAGCTGC
CACCACAGCCCGTGCTCCCTGCCGGACTGCTACTTCTACAAATCCTACAGTTACAGTTAC
AAGCCGTCGCCTTCCTTTGGCTTTGGCTATCACCTAGAATCCGGAGGACACTGCATCATT
CAGTAG

Peptide Sequence

PEP ID

Os01t0249700-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:8229331:8229903:1 gene:Os01g0249700 transcript:Os01t0249700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal-associated domain, HMA domain containing protein. (Os01t0249700-00)
Sequence

LYPVNLTQFLQKTVIRADLIGRSCKKDILHAVSTLQGIKSMDIDEEKCTLTVLGPVDPVK
IVHRLKKKCFAAAVVSVEDDKPKEPDPPAPEKKKEDDDDPCQCQCKEAECACVKVCAASC
HHSPCSLPDCYFYKSYSYSYKPSPSFGFGYHLESGGHCIIQ

Transcript Sequence

Transcript ID

Os01t0249700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:8229331:8229903:1 gene:Os01g0249700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal-associated domain, HMA domain containing protein. (Os01t0249700-00)
Sequence

CTGTATCCTGTCAATTTGACACAATTTTTGCAGAAGACGGTGATCAGAGCCGATCTCATC
GGCAGAAGCTGCAAGAAAGACATCTTGCATGCTGTCTCCACGCTACAAGGGATCAAGTCG
ATGGACATCGACGAGGAGAAGTGCACGCTGACGGTGCTGGGCCCCGTGGACCCGGTGAAG
ATCGTGCACCGGCTGAAGAAGAAGTGCTTCGCGGCGGCGGTCGTCAGCGTCGAGGACGAC
AAGCCCAAGGAGCCGGATCCGCCGGCGCCGGAGAAGAAGAAGGAGGACGACGATGATCCG
TGCCAGTGCCAGTGCAAGGAGGCGGAGTGCGCCTGCGTGAAGGTGTGCGCGGCGAGCTGC
CACCACAGCCCGTGCTCCCTGCCGGACTGCTACTTCTACAAATCCTACAGTTACAGTTAC
AAGCCGTCGCCTTCCTTTGGCTTTGGCTATCACCTAGAATCCGGAGGACACTGCATCATT
CAGTAG