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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0249300-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:8212480:8215091:-1 gene:Os01g0249300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lg106-like family protein. (Os01t0249300-01);Lg106-like family protein. (Os01t0249300-02)
Sequence

ATGTCGGATATGAAGGACACCAATGCTGCTGGACCTGAAACTGTTGGAAATCCTGACCCT
ATGGACCAAACTGAAGATAACTCCATGCCCTCAGCTCAAGAACAGGAATTAGCAATCAAG
AAGAAATTTGGAGGACTAATGCCAAAAAAACCACCACTCATCTCGAAGGATCATGAACGG
GCCTATTTTGATTCTGCTGACTGGGCTCTGGGAAAGTCTGGACAGCAAGGCGCTGCGAAA
CCCAAAGGACCTCTTGAGGCACTTAGGCCAAAGTTGCAGCCAACACGACAACAGCAGCAG
CGTTCCAGGCGCTTGATTAACACCTCATCAGAAAACGAGGATGGAGACGGTGCTGGTGCT
GAGGATATGAACATCAACTGA

Peptide Sequence

PEP ID

Os01t0249300-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:8212480:8215091:-1 gene:Os01g0249300 transcript:Os01t0249300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lg106-like family protein. (Os01t0249300-01);Lg106-like family protein. (Os01t0249300-02)
Sequence

MSDMKDTNAAGPETVGNPDPMDQTEDNSMPSAQEQELAIKKKFGGLMPKKPPLISKDHER
AYFDSADWALGKSGQQGAAKPKGPLEALRPKLQPTRQQQQRSRRLINTSSENEDGDGAGA
EDMNIN

Transcript Sequence

Transcript ID

Os01t0249300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:8212480:8215091:-1 gene:Os01g0249300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lg106-like family protein. (Os01t0249300-01);Lg106-like family protein. (Os01t0249300-02)
Sequence

GTCAACTCCTCTCCTCTCCTCGCGAGTTCGCGCACCGCCTCCGCCGATCTCCATCTCCGC
CGCCGTCCTGCTGCTTCCGCCGCATCACATCCCGGTGAGCATCCCTATCCGTCACGCTCA
CGCGCATCCTCTCTCTTAGCGCGTAAAAGAAGAAGAAATCTCCCGTCTCGTTCTCGTTAC
TGTCTCCTCCGCTCCTCTCCTTGCGCCGCTGCCAAGACGAACAGGGGGGAGGGCCGGGCG
GCGATCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGTGAGGGGATCCTGCATCATGTC
GGATATGAAGGACACCAATGCTGCTGGACCTGAAACTGTTGGAAATCCTGACCCTATGGA
CCAAACTGAAGATAACTCCATGCCCTCAGCTCAAGAACAGGAATTAGCAATCAAGAAGAA
ATTTGGAGGACTAATGCCAAAAAAACCACCACTCATCTCGAAGGATCATGAACGGGCCTA
TTTTGATTCTGCTGACTGGGCTCTGGGAAAGTCTGGACAGCAAGGCGCTGCGAAACCCAA
AGGACCTCTTGAGGCACTTAGGCCAAAGTTGCAGCCAACACGACAACAGCAGCAGCGTTC
CAGGCGCTTGATTAACACCTCATCAGAAAACGAGGATGGAGACGGTGCTGGTGCTGAGGA
TATGAACATCAACTGACCTGCTCAGGGAGTGTTCTGTTGGGAACCTCATGATTCAAAGCA
GCTCATTGTTCGTGGATCGCAGGGAAGGATATGATGTCTTTGATGTTTCCATAGATATGA
AAAGAAATGTTGTATTTTTCAAAGACCGATGTTAATTCATCGCACAGCTTACCTATATCT
GTGCCAAATTTCAGCATAGACTAAACCATTGTTTGCATACGGCGTTGCACTCCAGTCGTG
CTACGGCCTATTTGTCAATGGATATTTTTAAACAAGTTTGTATTGTAC