Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0249200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:8203832:8206969:-1 gene:Os01g0249200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 1-1 description:Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]). (Os01t0249200-01)
Sequence	ATGGCTGGGGCTGCAGGGTCGTCGTGGTCCTCTCTGCTCCTCGCAGCGGTGGCGGTGGCG CTCGCCGTCGCCGCAGCGCCGTCGCTCGCCGGCGACCCGGACTACCTCCAGGACATCTGC GTCGCCGACCTCAACTCCGAGGTGAAGGTGAACGGGTTCCCGTGCAAGGCGAACGCGACG GCGGACGACTTCTTCTCCGGCGTGCTCGCCAGCCCCGGCGCCGCCGCCAACACCACCACC GGCGCCGTGGTCACCGGCGCCAACGTCGAGAAGGTCCCGGGCCTCAACACCCTGGGCGTC TCCCTCGCCCGCATCGACTACGCCCCCGGCGGCCTCAACCCGCCGCACACCCACCCGCGC GCCACCGAGGTCGTCTTCGTCCTCTACGGCGAGCTCGACGTCGGCTTCGTCACCACCGCC AACAAGCTCCTCTCCCGCACCATCTCCCAGGGCGACGTCTTCGTCTTCCCCCGCGGCCTC GTCCACTTCCAGAGGAACACCGGCGACAAGCCCGCCGCCGTCGTCTCCGCCTTCAACAGC CAGCTCCCCGGCACGCAGTCCATCGCCGCCACGCTCTTCGCCGCCTCGCCGGCGGTGCCC GACGCCGTCCTCGCCAAGGCCTTCCAGATCGACGACGAGGAGGTGGACAAGATCAAGGCC AAGTTTGCCCCCAAGAAGACCTAG

Peptide Sequence

PEP ID	Os01t0249200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:8203832:8206969:-1 gene:Os01g0249200 transcript:Os01t0249200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 1-1 description:Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]). (Os01t0249200-01)
Sequence	MAGAAGSSWSSLLLAAVAVALAVAAAPSLAGDPDYLQDICVADLNSEVKVNGFPCKANAT ADDFFSGVLASPGAAANTTTGAVVTGANVEKVPGLNTLGVSLARIDYAPGGLNPPHTHPR ATEVVFVLYGELDVGFVTTANKLLSRTISQGDVFVFPRGLVHFQRNTGDKPAAVVSAFNS QLPGTQSIAATLFAASPAVPDAVLAKAFQIDDEEVDKIKAKFAPKKT

Transcript Sequence

Transcript ID	Os01t0249200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8203832:8206969:-1 gene:Os01g0249200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 1-1 description:Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]). (Os01t0249200-01)
Sequence	GCTCAACGACAAGTGGTCAACACACATCAATCAATTAACCATCGGCGAGCAGAAGAAGAG CAGAGGCTCAGCTAGCAGGCGAGAGAGATCAGCGAGCAGGATGGCTGGGGCTGCAGGGTC GTCGTGGTCCTCTCTGCTCCTCGCAGCGGTGGCGGTGGCGCTCGCCGTCGCCGCAGCGCC GTCGCTCGCCGGCGACCCGGACTACCTCCAGGACATCTGCGTCGCCGACCTCAACTCCGA GGTGAAGGTGAACGGGTTCCCGTGCAAGGCGAACGCGACGGCGGACGACTTCTTCTCCGG CGTGCTCGCCAGCCCCGGCGCCGCCGCCAACACCACCACCGGCGCCGTGGTCACCGGCGC CAACGTCGAGAAGGTCCCGGGCCTCAACACCCTGGGCGTCTCCCTCGCCCGCATCGACTA CGCCCCCGGCGGCCTCAACCCGCCGCACACCCACCCGCGCGCCACCGAGGTCGTCTTCGT CCTCTACGGCGAGCTCGACGTCGGCTTCGTCACCACCGCCAACAAGCTCCTCTCCCGCAC CATCTCCCAGGGCGACGTCTTCGTCTTCCCCCGCGGCCTCGTCCACTTCCAGAGGAACAC CGGCGACAAGCCCGCCGCCGTCGTCTCCGCCTTCAACAGCCAGCTCCCCGGCACGCAGTC CATCGCCGCCACGCTCTTCGCCGCCTCGCCGGCGGTGCCCGACGCCGTCCTCGCCAAGGC CTTCCAGATCGACGACGAGGAGGTGGACAAGATCAAGGCCAAGTTTGCCCCCAAGAAGAC CTAGACGATATAAGATTATAAGGCGACGTATACATTGGAGAGATTTGAGGTTTCAAACTT ATCTTAAAATTTGAATTGATTTGTCTGTGATTTGATGATTAACTATATGTACTTGTCGAT GATATAATGCCATCTTGATGACACTTATTTGTGTAAGAGCGACATGCAAAATGTAGTAGT AATAGAGAAGTTTCTTGTAATAAGTTGCTGGGGAGAACGATGATGATTTGTTAATGATTA GTACAATCATTTTGGCTGG