Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0248400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:8170309:8175903:1 gene:Os01g0248400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isocitrate dehydrogenase (Fragment). (Os01t0248400-01)
Sequence	ATGGCGTTCGAGAAGATCGTCGTGGCCAACCCCGTCGTCGAGATGGACGGTGATGAGATG ACTCGAGTTATTTGGAAATGGATCAAAGATAAGCTTATATTCCCTTTCTTGGACTTGGAC ATAAAATACTATGACTTAGGTCTACCTAATCGTGACGCTACTGGGGACAAAGTTACAATA GAGAGTGCAGAAGCGACCCTAAAGTATAATGTAGCCATCAAATGTGCAACTATAACTCCA GATGAAGGACGCGTGAAAGAGTTTAATTTAAGTGCAATGTGGAAGAGTCCAAATGGGACA ATAAGGAACATTTTGAATGGAACTGTTTTCCGAGAACCAATCATCTGCAAGAATATTCCT CGGCTTGTACCTGGGTGGATAAAGCCCATATGCATTGGACGACATGCATTTGGTGATCAA TACCGAGCAACAGATACAGTTATTAAAGGTCCTGGGAAGTTGAAGTTAGTATTTGATGGC AGAGAGGAACAAATAGAGTTGGATGTGTTCAACTTTACTGGTGCTGGTGGAGTAGCCTTG TCTATGTATAATACTGACGAGTCTATTTGGGCATTCGCTGAAGCTTCCATGAACATGGCT TACCAGAAAAGATGGCCACTTTATCTTAGCACCAAAAACACGATCCTCAAAAAATACGAT GGAAGGTTTAAAGATATATTTCAGGAGAACTATGAAACAAAATGGAGAGCCAAGTTTGAT GATGCAGGAATATGGTACGAACATCGGCTGATTGATGATATGGTGGCCTATGCCCTTAAG AGTGAAGGTGGCTATGTTTGGGCTTGCAAGAACTATGATGGAGATGTGCAGAGCGATCTA ATTGCTCAAGGTTTTGGATCGCTAGGTCTAATGACATCAGTTCTGGTGTGCCCTGATGGT AGAACCATTGAAGCTGAAGCTGCTCATGGTACAGTCACACGCCATTACAGAGTTCACCAA AAAGGAGGCGAAACTAGTACAAATAGCATTGCTTCAATATTTGCTTGGACAACCGGACTA GGACATAGGGCAAAGCTCGATGACAATAAAAGACTGTTAGATTTTGTACAAAAACTTGAA GCTGCTTGTGTGGGAACAGTGGAATCTGGAAAGATGACAAAGGATCTAGCTCTTCTTGTA CATGGGCCAAATGTTAGCCGAGATAAGTATCTTAACACTGTTGAGTTCATCGATGCTGTT GCTGAGGATTTAAGAACAAGATTGTCAGTAACATCCAAGTTATGA

Peptide Sequence

PEP ID	Os01t0248400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:8170309:8175903:1 gene:Os01g0248400 transcript:Os01t0248400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isocitrate dehydrogenase (Fragment). (Os01t0248400-01)
Sequence	MAFEKIVVANPVVEMDGDEMTRVIWKWIKDKLIFPFLDLDIKYYDLGLPNRDATGDKVTI ESAEATLKYNVAIKCATITPDEGRVKEFNLSAMWKSPNGTIRNILNGTVFREPIICKNIP RLVPGWIKPICIGRHAFGDQYRATDTVIKGPGKLKLVFDGREEQIELDVFNFTGAGGVAL SMYNTDESIWAFAEASMNMAYQKRWPLYLSTKNTILKKYDGRFKDIFQENYETKWRAKFD DAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDLIAQGFGSLGLMTSVLVCPDG RTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTTGLGHRAKLDDNKRLLDFVQKLE AACVGTVESGKMTKDLALLVHGPNVSRDKYLNTVEFIDAVAEDLRTRLSVTSKL

Transcript Sequence

Transcript ID	Os01t0248400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:8170309:8175903:1 gene:Os01g0248400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isocitrate dehydrogenase (Fragment). (Os01t0248400-01)
Sequence	GGCCGAACGCCCGCGCCGTGTCTGCTTATGATGCTTCGTTCTCTCCGCGCTCCGTGTCCG ACCTTCTTCAGACTTCACACCTCGCGCGCCGCCGCAGCTCCGATCGGAAGAAGCTCGATT CGTCTCCGACTCCGACGACCAGAAGCTACCGGCGACGCGAGCGGAGAAGCGCGGAGGGGA GGGGGCGCGCGCCGCCATGGCGTTCGAGAAGATCGTCGTGGCCAACCCCGTCGTCGAGAT GGACGGTGATGAGATGACTCGAGTTATTTGGAAATGGATCAAAGATAAGCTTATATTCCC TTTCTTGGACTTGGACATAAAATACTATGACTTAGGTCTACCTAATCGTGACGCTACTGG GGACAAAGTTACAATAGAGAGTGCAGAAGCGACCCTAAAGTATAATGTAGCCATCAAATG TGCAACTATAACTCCAGATGAAGGACGCGTGAAAGAGTTTAATTTAAGTGCAATGTGGAA GAGTCCAAATGGGACAATAAGGAACATTTTGAATGGAACTGTTTTCCGAGAACCAATCAT CTGCAAGAATATTCCTCGGCTTGTACCTGGGTGGATAAAGCCCATATGCATTGGACGACA TGCATTTGGTGATCAATACCGAGCAACAGATACAGTTATTAAAGGTCCTGGGAAGTTGAA GTTAGTATTTGATGGCAGAGAGGAACAAATAGAGTTGGATGTGTTCAACTTTACTGGTGC TGGTGGAGTAGCCTTGTCTATGTATAATACTGACGAGTCTATTTGGGCATTCGCTGAAGC TTCCATGAACATGGCTTACCAGAAAAGATGGCCACTTTATCTTAGCACCAAAAACACGAT CCTCAAAAAATACGATGGAAGGTTTAAAGATATATTTCAGGAGAACTATGAAACAAAATG GAGAGCCAAGTTTGATGATGCAGGAATATGGTACGAACATCGGCTGATTGATGATATGGT GGCCTATGCCCTTAAGAGTGAAGGTGGCTATGTTTGGGCTTGCAAGAACTATGATGGAGA TGTGCAGAGCGATCTAATTGCTCAAGGTTTTGGATCGCTAGGTCTAATGACATCAGTTCT GGTGTGCCCTGATGGTAGAACCATTGAAGCTGAAGCTGCTCATGGTACAGTCACACGCCA TTACAGAGTTCACCAAAAAGGAGGCGAAACTAGTACAAATAGCATTGCTTCAATATTTGC TTGGACAACCGGACTAGGACATAGGGCAAAGCTCGATGACAATAAAAGACTGTTAGATTT TGTACAAAAACTTGAAGCTGCTTGTGTGGGAACAGTGGAATCTGGAAAGATGACAAAGGA TCTAGCTCTTCTTGTACATGGGCCAAATGTTAGCCGAGATAAGTATCTTAACACTGTTGA GTTCATCGATGCTGTTGCTGAGGATTTAAGAACAAGATTGTCAGTAACATCCAAGTTATG AAGGAATGAATAGGGCAACGGCAGGGGACATGTTAGGATCCCATGATACAAAGTTTATAC ATTTTTACTTTGAATAAGAGCGATTGAAGCATTGGTATGCGCAGCTATCAACCACGGTGC TCTGATAAAATCTGGTAAAGATTGTATGCATACTCCATACAACAATGGAGGTGGAGGAGG ATATTTTGCTCGAAATAAGAAGTTTGAACTTTTATTCGTCAGACTTCTACTTATAACTAC TTTGATGATTAAATCATGGCCGTGTAGCTTAGTTCTTCTATGCCAAAAGAGCAAGTAGAA CTATCCTAAAGGTACCCACCACAAGTGGTGTTTGTGCTTTGTACCATACAAACAAGACTG TTTATTTACTACAGTATATAGCTTGGAATAAAAAAGCAGGTGCAGATCTGTTGGT