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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0243200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:7894961:7898120:-1 gene:Os01g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0797 description:Similar to integral membrane transporter family protein. (Os01t0243200-01);Biopterin transport-related protein BT1 family protein. (Os01t0243200-02)
Sequence

ATGCATCTTTGTGCCTGCAGGATTTTGTCAGACTGTATTCCCATCAAGCAGAGGAAGCGT
ACGCCCTATTTGATCATTTCTAGCTGTCTATCTCTATTTCCGTGGCTAATCCTTGGGATG
TCAGAACCTTTGAGGAGCTCAAGCAATTTTCTTACTGCTTTGCTGATAGTACAGAACTTG
GGATCTGCCATGGCAGATGTTGTTATAGATGCAATGATTGCAGAAGCAGTTCGATCAGCT
GGGCCAGAATTTGCTGGTGATCTCCAGTCACTATCTTGGTCATCAATGGCAGTAGGGGGG
ATTTTTGGGAGCTTATTGGGGGGATATGCACTGTCCAATCTCCCTATACATGTTATATAT
ATTATTTTCTCGGCGCTTCCATTGTTTCAACTAATTTCCTGCATATTTGTTGAGGAATCT
CCAAAAGGATTTGAGAGTAGAATGGATAATGCTGCACCTAAACATGTCGAGGATCAAACT
ATTGATGCTTCTCCCGGAAAAAGCTCTAGTGAATCATATAAATATGAAGATACTAGAAGG
CGAAAAGGAGCTAGGAGAAATAATAAAAGGAAATCATTGTCCAAACGACCTGAGGACCAT
GACAAGAACAAGTCAACTAACTTAAGGCCATACTTGTCTCTGAAATCAGCATTCTTCAGT
TTATGCACAGCATTCAAACAACCAACTATTTTACGACCTATGGCGTGGTTTTTCTTTTCG
AATGTAGCAATTCCAAATATCTCAACAGTCATGTTCTACTATCAAACAGAGGTCCTACAT
TTGGAGGCATCCTTTCTGGGGACTGCACGTGTAATTGGGTGGTTCAGTCTAATGCTTGGC
ACATATATCTACAACCGCTATTTTAAACACAAGAAACTCAGGAATATTCTCATGTTTGCA
CATGTTGGTCTTGCCATAATTGGCGTACTGGACATTCTTTTGGTGTTGCGGTTACATGTT
CACTATGGAATTACAGACAAATACATGGTCTTGTGGGGTTCTGCTTTGGCTGATGCAATT
AACCAGTTCAAGATGATGCCGTTCCTCATCCTCTCTGGGCAGCTTTGCCCTCCTGGAATC
GAGGGAACACTGTTCGCTCTGTTCATGTCCATCAACAACTTTGGCTCGACTTTAGGCTCA
TTCTTGGGAGCGGCTCTGGCGTCAGCTTTAAGCATCTCATCAGCACAATTCGACAATCTG
GCGCTCGGCTTAGGTGTACAGCTGATTGGCACTCTCCTACCGGTTGGATTTTTGTTTCTG
ATACCAAAGGAAGTTACAGGGCTAACGTCATAG

Peptide Sequence

PEP ID

Os01t0243200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:7894961:7898120:-1 gene:Os01g0243200 transcript:Os01t0243200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0797 description:Similar to integral membrane transporter family protein. (Os01t0243200-01);Biopterin transport-related protein BT1 family protein. (Os01t0243200-02)
Sequence

MHLCACRILSDCIPIKQRKRTPYLIISSCLSLFPWLILGMSEPLRSSSNFLTALLIVQNL
GSAMADVVIDAMIAEAVRSAGPEFAGDLQSLSWSSMAVGGIFGSLLGGYALSNLPIHVIY
IIFSALPLFQLISCIFVEESPKGFESRMDNAAPKHVEDQTIDASPGKSSSESYKYEDTRR
RKGARRNNKRKSLSKRPEDHDKNKSTNLRPYLSLKSAFFSLCTAFKQPTILRPMAWFFFS
NVAIPNISTVMFYYQTEVLHLEASFLGTARVIGWFSLMLGTYIYNRYFKHKKLRNILMFA
HVGLAIIGVLDILLVLRLHVHYGITDKYMVLWGSALADAINQFKMMPFLILSGQLCPPGI
EGTLFALFMSINNFGSTLGSFLGAALASALSISSAQFDNLALGLGVQLIGTLLPVGFLFL
IPKEVTGLTS

Transcript Sequence

Transcript ID

Os01t0243200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7894961:7898120:-1 gene:Os01g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0797 description:Similar to integral membrane transporter family protein. (Os01t0243200-01);Biopterin transport-related protein BT1 family protein. (Os01t0243200-02)
Sequence

ACATGCATCTTTGTGCCTGCAGGATTTTGTCAGACTGTATTCCCATCAAGCAGAGGAAGC
GTACGCCCTATTTGATCATTTCTAGCTGTCTATCTCTATTTCCGTGGCTAATCCTTGGGA
TGTCAGAACCTTTGAGGAGCTCAAGCAATTTTCTTACTGCTTTGCTGATAGTACAGAACT
TGGGATCTGCCATGGCAGATGTTGTTATAGATGCAATGATTGCAGAAGCAGTTCGATCAG
CTGGGCCAGAATTTGCTGGTGATCTCCAGTCACTATCTTGGTCATCAATGGCAGTAGGGG
GGATTTTTGGGAGCTTATTGGGGGGATATGCACTGTCCAATCTCCCTATACATGTTATAT
ATATTATTTTCTCGGCGCTTCCATTGTTTCAACTAATTTCCTGCATATTTGTTGAGGAAT
CTCCAAAAGGATTTGAGAGTAGAATGGATAATGCTGCACCTAAACATGTCGAGGATCAAA
CTATTGATGCTTCTCCCGGAAAAAGCTCTAGTGAATCATATAAATATGAAGATACTAGAA
GGCGAAAAGGAGCTAGGAGAAATAATAAAAGGAAATCATTGTCCAAACGACCTGAGGACC
ATGACAAGAACAAGTCAACTAACTTAAGGCCATACTTGTCTCTGAAATCAGCATTCTTCA
GTTTATGCACAGCATTCAAACAACCAACTATTTTACGACCTATGGCGTGGTTTTTCTTTT
CGAATGTAGCAATTCCAAATATCTCAACAGTCATGTTCTACTATCAAACAGAGGTCCTAC
ATTTGGAGGCATCCTTTCTGGGGACTGCACGTGTAATTGGGTGGTTCAGTCTAATGCTTG
GCACATATATCTACAACCGCTATTTTAAACACAAGAAACTCAGGAATATTCTCATGTTTG
CACATGTTGGTCTTGCCATAATTGGCGTACTGGACATTCTTTTGGTGTTGCGGTTACATG
TTCACTATGGAATTACAGACAAATACATGGTCTTGTGGGGTTCTGCTTTGGCTGATGCAA
TTAACCAGTTCAAGATGATGCCGTTCCTCATCCTCTCTGGGCAGCTTTGCCCTCCTGGAA
TCGAGGGAACACTGTTCGCTCTGTTCATGTCCATCAACAACTTTGGCTCGACTTTAGGCT
CATTCTTGGGAGCGGCTCTGGCGTCAGCTTTAAGCATCTCATCAGCACAATTCGACAATC
TGGCGCTCGGCTTAGGTGTACAGCTGATTGGCACTCTCCTACCGGTTGGATTTTTGTTTC
TGATACCAAAGGAAGTTACAGGGCTAACGTCATAGGAAGAGGGATACACATACCTGACCA
TCATTTTCTTTTTTCCGGATTGGTTTGCAGTCTTAAGTGCTGGAGTAATTCAGAACAGAA
AAATTAAAGGTAGCATGATGAAGGTACTAAGGTAGTCAATTCTGTTGAAAGATGTATACA
TGAATACACTAGAGTGAGGAAGAATACAAATAGACAGTAGATGGTAGGCATTGCCAAGAG
TTGAGCAAAGGTTATGTACCTGCGTAATGTACTACAGTGGAAGTGACATTTTTTCCCCGG
AGAAATTGACATTACTGACATTGGAATC