Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0243000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7880003:7882578:-1 gene:Os01g0243000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os01t0243000-01)
Sequence

ATGGGGAGCAACGGCGGCGGCGGAGGTGGCGGGAAGCAGGTGCTGTGGGAGTTCCACGCG
ACGGGGCCCCGCAACATCTCCAACCCCAGCTGGAGGGACCTCATCCGCTCGAGCTGGACA
GATCCCAACTACCGAAGAATTGCGGTTTCATGCTTCGTGCAGGCTGCGTATCTACTGGAG
CTAGACAGGCAGGAGAAGAGAAACGGTGAAAGCGCCCTTGCTCCTAACTGGTGGAAGCCA
TTCAAGTACAAGCTGGTGCGTCCTCTAATTGATTCTAGAGATGGATCCATATATGGTGTG
CTGCTAGAATGGGACCAGCTTGCTGCCCTATCAGACTTGATAGTGTTGAGACCTAATGGC
GCCCCGAAGGTTGTCCTCGCGATAAGGGGAACAGTACTTAAGCAGTCGACAGTTGTGAGA
GACCTCGAAGACGACTTCCGGTTCTTCACCATGGAGAGCTTGAGGGGCTCTGTCAGGTTC
ACCGGTGCTCTCGAGGCGCTCAAGTCGGCGATCGACAAGCGTGGCAGCAACAATGTGTGC
ATTGCTGGGCATTCCCTGGGGGCAGGCTTTGCTCTGCAGGTTGGCAAGACTTTGGCTCAA
GATGGGATCTTTGTAGAATGCCATCTGTTCAATCCACCATCAGTCTCACTTGGCATGGGG
CTGAGGAAACTTCAGGAGAAAGCCGGCAAGGTCTTGAAGAGATATGTCAGTGGAAGTTCT
TCAAATGCTACAGAACTTTCTCACCCAACAGAGGATGGAGGAGCAGCTTCTGAAATTGGA
GAAGAAAAGCTGATCAAGGAGGTAAAGAGATGGGTGCCAAACCTGTACATAAACAGCTGT
GACTACATTTGCTGCTTTTATGCTGATCGCAGCGGTGTCGCCACTGTTACTGCCGAGAAG
CATGATGGCCATTCTGGGACTCATTCCAAGCTGTTTGTGATTGCCAAAGGACCAAAGAAG
TTCCTTGAAGCTCATGGGTTGCAGCAATGGTGGTCAGATGATTATGAACTCCAGTTGGCC
GTTCATGATAGCAAGCTCATGTATAGGCACCTTAAGTCGCTGTATGTGAATGAATCATAG

Peptide Sequence

PEP ID

Os01t0243000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7880003:7882578:-1 gene:Os01g0243000 transcript:Os01t0243000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os01t0243000-01)
Sequence

MGSNGGGGGGGKQVLWEFHATGPRNISNPSWRDLIRSSWTDPNYRRIAVSCFVQAAYLLE
LDRQEKRNGESALAPNWWKPFKYKLVRPLIDSRDGSIYGVLLEWDQLAALSDLIVLRPNG
APKVVLAIRGTVLKQSTVVRDLEDDFRFFTMESLRGSVRFTGALEALKSAIDKRGSNNVC
IAGHSLGAGFALQVGKTLAQDGIFVECHLFNPPSVSLGMGLRKLQEKAGKVLKRYVSGSS
SNATELSHPTEDGGAASEIGEEKLIKEVKRWVPNLYINSCDYICCFYADRSGVATVTAEK
HDGHSGTHSKLFVIAKGPKKFLEAHGLQQWWSDDYELQLAVHDSKLMYRHLKSLYVNES

Transcript Sequence

Transcript ID

Os01t0243000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7880003:7882578:-1 gene:Os01g0243000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os01t0243000-01)
Sequence

GTATATTCTTCCCCGCCCGCACGGGCCACGGATCCATCCACCCCCTTCCTTCTCTCCGAC
GTTGACGAGCGCCTCCTCGATCGGCGGCACCGGCGCGCCGCCCCCCTCTCCCGCCTTCCC
TTTCCTTCTCCGCTAATCAACCGGTGGTGCGAGAGCGAGAGCGACGGGCGGAGGGGATCG
ACGATGGGGAGCAACGGCGGCGGCGGAGGTGGCGGGAAGCAGGTGCTGTGGGAGTTCCAC
GCGACGGGGCCCCGCAACATCTCCAACCCCAGCTGGAGGGACCTCATCCGCTCGAGCTGG
ACAGATCCCAACTACCGAAGAATTGCGGTTTCATGCTTCGTGCAGGCTGCGTATCTACTG
GAGCTAGACAGGCAGGAGAAGAGAAACGGTGAAAGCGCCCTTGCTCCTAACTGGTGGAAG
CCATTCAAGTACAAGCTGGTGCGTCCTCTAATTGATTCTAGAGATGGATCCATATATGGT
GTGCTGCTAGAATGGGACCAGCTTGCTGCCCTATCAGACTTGATAGTGTTGAGACCTAAT
GGCGCCCCGAAGGTTGTCCTCGCGATAAGGGGAACAGTACTTAAGCAGTCGACAGTTGTG
AGAGACCTCGAAGACGACTTCCGGTTCTTCACCATGGAGAGCTTGAGGGGCTCTGTCAGG
TTCACCGGTGCTCTCGAGGCGCTCAAGTCGGCGATCGACAAGCGTGGCAGCAACAATGTG
TGCATTGCTGGGCATTCCCTGGGGGCAGGCTTTGCTCTGCAGGTTGGCAAGACTTTGGCT
CAAGATGGGATCTTTGTAGAATGCCATCTGTTCAATCCACCATCAGTCTCACTTGGCATG
GGGCTGAGGAAACTTCAGGAGAAAGCCGGCAAGGTCTTGAAGAGATATGTCAGTGGAAGT
TCTTCAAATGCTACAGAACTTTCTCACCCAACAGAGGATGGAGGAGCAGCTTCTGAAATT
GGAGAAGAAAAGCTGATCAAGGAGGTAAAGAGATGGGTGCCAAACCTGTACATAAACAGC
TGTGACTACATTTGCTGCTTTTATGCTGATCGCAGCGGTGTCGCCACTGTTACTGCCGAG
AAGCATGATGGCCATTCTGGGACTCATTCCAAGCTGTTTGTGATTGCCAAAGGACCAAAG
AAGTTCCTTGAAGCTCATGGGTTGCAGCAATGGTGGTCAGATGATTATGAACTCCAGTTG
GCCGTTCATGATAGCAAGCTCATGTATAGGCACCTTAAGTCGCTGTATGTGAATGAATCA
TAGGAAACTGAATTTTGTAAATGCATCGTGTTCTTTTGCTTCTCTAGCCAAGAAAATGTG
AATTTTTCTTTTGAATGGCGCATGGCACAAGCCTCGTACATTCTTTTTTTTTTTTTGACC
TGGAAAAACAATCCCAGTGAGATCGCTGGTCACC