Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0242600-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:7862088:7867709:-1 gene:Os01g0242600 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0242600-01);C2 calcium-dependent membrane targeting domain containing protein. (Os01t0242600-02)
Sequence	ATGGACGCCGGCGAGCTGCCCATCGTGTACCACATCGGCATCGTGCTGGCCGCGCTGTGG GCCGCGGGCTCCCTCGGCTTCCGCCACTCCGTCCTCTTCCTCCTCGCCTTCCTCTACCTC TACATGGTAAATGCTCGCTGTGCAATGAAATTGCGGAAGAGAATACAACATGAAGAAATG AAATCTGCCTACCAACGAAGACTGCTATCTGATGCAGAATCAGTACGCTGGTTAAATTAT GCAATAAAAAAGATGTGGCCTATCTGTATGGAGAAGATCGTCTCACAACTTCTACGACCC ATAATACCATGGTTCTTGGATAAGTTCAAACCTTGGACAGTTAGTAAAGCAGGAGTTCAG GAGCTTTATATGGGCAGGAATTCACCACTGTTTACTTCAATGAGAGTTTTACCTGAGACA TCAGATGATGACCATTTGGTTCTGGAGATAGGGATGAATTTTCTATCTGCTGAAGATATG AGTGCTGTACTTTCTATGCAGCTGCATAAGAGTGTCGGACTTGGAATGACTGCAAACATG CATCTGACTAGCATGCATGTTGAGGGAAAGATTCTAGTCGGTGTGAAGTTTGTCCGGAGT TGGCCATTTCTTGGCCGTGTAAGACTATGTTTTGTGGAGCCTCCTTATTTTCAGATGACT GTAAAGCCACTCATTGGTCATGGGCTTGATGTCACTGAGTTTCCAGGAATTTCAGGATGG CTGGATAAGTTGATGGATACTGCATTTGGGCAGACATTAGTTGAGCCCAATATGCTTGTT ATCGATGTGGAAAAATTTGTATCGACTCCCTCAGACAATGACTGGTTCAGCATTGAGGAG AGACCTCCTGTTGCATATGTGAAACTTGAGATTTTAGAAGGATCCGACATGAAACCATCT GATATGAATGGGCTCTCCGACCCTTATGTGAAAGGTCGTCTTGGTCCTTTTAAATTCCAA ACTCAGATACAGAAGAAAACACTATCCCCTAAGTGGTTTGAAGAATTCAAAATACCCATT ACATCGTGGGAGTCATTAAATGAACTTGCCATGGAAGTGTGTGATAAGGACCACATGTTT GATGACTCGCTTGGAACATGTACTATAGATATCCATGAGCTGAGGGGTGGTCAGAGACAT GACAAATGGATATCACTCAAGAATGTCAAGAAAGGAAGGATTCACTTGGCAATAACAGTT GAAGATATATCAGAGGAGAAGGGGTTGGAAGAATCATCAAGGAAAGTTGATGCTGAACTA CCAATATCAACATCCGTCAACAAGTTTAATGCTGATGAACTGCCTGATGAAAAGCAAGTC TTAGTAGATGAAGTGGAGCACATTAACATTGATGGGCAAGAACAACCTGGAGGATTATAT GTGCATCGCCCTGGCACTGGAGTTCCCAAGACATGGGAATCACGGAAAGGGCGAGCACGT AATCCTGACACGGAGATTTACAAAGAAGTTGACAAATCAAAGGATGCGCCTACCCCAAAA AGCAGTGGACAAGGGGGTTTTTTTGGCTCCTTTTTCCGGAAGAGCTTGAAGAAGGGAAGT TTCCATGATATTGATCCCGGTATTCCTACAACGCCAGGGCCTCAGAGTGCAACAGAGCTT GATCCGAAGATCCCACAAACTCCACGTCCAAACCTTAAGGAGGCCGGTGAAAAACGGACA TCGATAAAGATAGTAGTCGATGAAGATGCGAAACCGACAAGGAGTGCGGGAGATGCAGAG AACTTGACAGAAGATGTAGCCAAGGTGATGGAGAAAAACGCAGGTGAGCCAGGTAGATCA CTGACAAGCATACTGAGTAGAAAGATTTCCAGGAAGAAACCAGAGGACAAGCTGTCTGAT ATCCCAGAGCAGACTGAAGCTCAAGCATCTGAGTTGGTGAAAGAAGGGCCTGTTCCAGTT GAGGGTAAACCTATTGATGGTCATCCGACAACTGAAAATGGCCATGGAGATGGTGCTTCA GGAGAAGCAGCTGAAACGCAAACTAGTGCTCAGACTTCACAATGA

Peptide Sequence

PEP ID	Os01t0242600-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:7862088:7867709:-1 gene:Os01g0242600 transcript:Os01t0242600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0242600-01);C2 calcium-dependent membrane targeting domain containing protein. (Os01t0242600-02)
Sequence	MDAGELPIVYHIGIVLAALWAAGSLGFRHSVLFLLAFLYLYMVNARCAMKLRKRIQHEEM KSAYQRRLLSDAESVRWLNYAIKKMWPICMEKIVSQLLRPIIPWFLDKFKPWTVSKAGVQ ELYMGRNSPLFTSMRVLPETSDDDHLVLEIGMNFLSAEDMSAVLSMQLHKSVGLGMTANM HLTSMHVEGKILVGVKFVRSWPFLGRVRLCFVEPPYFQMTVKPLIGHGLDVTEFPGISGW LDKLMDTAFGQTLVEPNMLVIDVEKFVSTPSDNDWFSIEERPPVAYVKLEILEGSDMKPS DMNGLSDPYVKGRLGPFKFQTQIQKKTLSPKWFEEFKIPITSWESLNELAMEVCDKDHMF DDSLGTCTIDIHELRGGQRHDKWISLKNVKKGRIHLAITVEDISEEKGLEESSRKVDAEL PISTSVNKFNADELPDEKQVLVDEVEHINIDGQEQPGGLYVHRPGTGVPKTWESRKGRAR NPDTEIYKEVDKSKDAPTPKSSGQGGFFGSFFRKSLKKGSFHDIDPGIPTTPGPQSATEL DPKIPQTPRPNLKEAGEKRTSIKIVVDEDAKPTRSAGDAENLTEDVAKVMEKNAGEPGRS LTSILSRKISRKKPEDKLSDIPEQTEAQASELVKEGPVPVEGKPIDGHPTTENGHGDGAS GEAAETQTSAQTSQ

Transcript Sequence

Transcript ID	Os01t0242600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7862088:7867709:-1 gene:Os01g0242600 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0242600-01);C2 calcium-dependent membrane targeting domain containing protein. (Os01t0242600-02)
Sequence	AGATTCGCGCCCGCCACTTCCGACTAGCTCTTCGCGGCAAAAGAGATCGCCGGCTCGCCG GCCGGCCCGGAGCGCGGGGGTTCCGCTTCCGCGGCGGAGCAGCCGTCGGCTGGGGAGGGG AGATGGACGCCGGCGAGCTGCCCATCGTGTACCACATCGGCATCGTGCTGGCCGCGCTGT GGGCCGCGGGCTCCCTCGGCTTCCGCCACTCCGTCCTCTTCCTCCTCGCCTTCCTCTACC TCTACATGGTAAATGCTCGCTGTGCAATGAAATTGCGGAAGAGAATACAACATGAAGAAA TGAAATCTGCCTACCAACGAAGACTGCTATCTGATGCAGAATCAGTACGCTGGTTAAATT ATGCAATAAAAAAGATGTGGCCTATCTGTATGGAGAAGATCGTCTCACAACTTCTACGAC CCATAATACCATGGTTCTTGGATAAGTTCAAACCTTGGACAGTTAGTAAAGCAGGAGTTC AGGAGCTTTATATGGGCAGGAATTCACCACTGTTTACTTCAATGAGAGTTTTACCTGAGA CATCAGATGATGACCATTTGGTTCTGGAGATAGGGATGAATTTTCTATCTGCTGAAGATA TGAGTGCTGTACTTTCTATGCAGCTGCATAAGAGTGTCGGACTTGGAATGACTGCAAACA TGCATCTGACTAGCATGCATGTTGAGGGAAAGATTCTAGTCGGTGTGAAGTTTGTCCGGA GTTGGCCATTTCTTGGCCGTGTAAGACTATGTTTTGTGGAGCCTCCTTATTTTCAGATGA CTGTAAAGCCACTCATTGGTCATGGGCTTGATGTCACTGAGTTTCCAGGAATTTCAGGAT GGCTGGATAAGTTGATGGATACTGCATTTGGGCAGACATTAGTTGAGCCCAATATGCTTG TTATCGATGTGGAAAAATTTGTATCGACTCCCTCAGACAATGACTGGTTCAGCATTGAGG AGAGACCTCCTGTTGCATATGTGAAACTTGAGATTTTAGAAGGATCCGACATGAAACCAT CTGATATGAATGGGCTCTCCGACCCTTATGTGAAAGGTCGTCTTGGTCCTTTTAAATTCC AAACTCAGATACAGAAGAAAACACTATCCCCTAAGTGGTTTGAAGAATTCAAAATACCCA TTACATCGTGGGAGTCATTAAATGAACTTGCCATGGAAGTGTGTGATAAGGACCACATGT TTGATGACTCGCTTGGAACATGTACTATAGATATCCATGAGCTGAGGGGTGGTCAGAGAC ATGACAAATGGATATCACTCAAGAATGTCAAGAAAGGAAGGATTCACTTGGCAATAACAG TTGAAGATATATCAGAGGAGAAGGGGTTGGAAGAATCATCAAGGAAAGTTGATGCTGAAC TACCAATATCAACATCCGTCAACAAGTTTAATGCTGATGAACTGCCTGATGAAAAGCAAG TCTTAGTAGATGAAGTGGAGCACATTAACATTGATGGGCAAGAACAACCTGGAGGATTAT ATGTGCATCGCCCTGGCACTGGAGTTCCCAAGACATGGGAATCACGGAAAGGGCGAGCAC GTAATCCTGACACGGAGATTTACAAAGAAGTTGACAAATCAAAGGATGCGCCTACCCCAA AAAGCAGTGGACAAGGGGGTTTTTTTGGCTCCTTTTTCCGGAAGAGCTTGAAGAAGGGAA GTTTCCATGATATTGATCCCGGTATTCCTACAACGCCAGGGCCTCAGAGTGCAACAGAGC TTGATCCGAAGATCCCACAAACTCCACGTCCAAACCTTAAGGAGGCCGGTGAAAAACGGA CATCGATAAAGATAGTAGTCGATGAAGATGCGAAACCGACAAGGAGTGCGGGAGATGCAG AGAACTTGACAGAAGATGTAGCCAAGGTGATGGAGAAAAACGCAGGTGAGCCAGGTAGAT CACTGACAAGCATACTGAGTAGAAAGATTTCCAGGAAGAAACCAGAGGACAAGCTGTCTG ATATCCCAGAGCAGACTGAAGCTCAAGCATCTGAGTTGGTGAAAGAAGGGCCTGTTCCAG TTGAGGGTAAACCTATTGATGGTCATCCGACAACTGAAAATGGCCATGGAGATGGTGCTT CAGGAGAAGCAGCTGAAACGCAAACTAGTGCTCAGACTTCACAATGATTACAAGATCAGC CGCTGCTGTTGTTGCTGGTAGTTGTAGGTTTGCTTTGTTGTGCTTGTAGAACAAAATTAC TTTAGAGATTGTGTTACTTGTAAAATACAACAAAACATGATCATGTTGTAAAGTTACCTG CTCAGGTTTATACACGTCCATGTAAATCAAAGTTCATACTGTAATAACTTGTAAGTATGT AAACATGACTACACGAGAGGTTTGAGGGT