Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0242300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:7852689:7855760:1 gene:Os01g0242300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 family protein. (Os01t0242300-01)
Sequence	ATGTCGCTGCCGGTGGCGAAGCTGGGGACGCTGGCGCTGCGGACGCTGTCCAAGCCCATC GCCAGCCGCCTCAAGAACCAGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCTGC ATCGCGCAGATTAACCATCGTGTTACTACAAGGATACAAAGGCGCATTTATGGGCATGCA ACAGATGTGGAAATCACACCTTTAAATGAGGAGAAAGCTGTACAAGCTGCTACGGATCTC ATTGGAGAAGGCTTTATTTTTTCGGTTGCTGTTGCTGCTTTAATTTTTGAGGTGCAAAGA AATGCAAGGTCAGAGGCTAGGAAGGAGGAAGCTCGTAAACAGGAACTTGAGGAATTGAAA CAACGGGAAGAGAGTTTATCTAAAGATTTGGAGGATCTTAAACTGAGGCTTGCTGAAATT GAGCACCTCGCTAAAGGACGAGGCCTTTCAGGAATCTTGAACTTCAAAGGTGTTCATGGA GCAGAAAGCAGCAAGGCAGCAACACCTGCTTGA

Peptide Sequence

PEP ID	Os01t0242300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:7852689:7855760:1 gene:Os01g0242300 transcript:Os01t0242300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 family protein. (Os01t0242300-01)
Sequence	MSLPVAKLGTLALRTLSKPIASRLKNQAAVHPKFRNFIICIAQINHRVTTRIQRRIYGHA TDVEITPLNEEKAVQAATDLIGEGFIFSVAVAALIFEVQRNARSEARKEEARKQELEELK QREESLSKDLEDLKLRLAEIEHLAKGRGLSGILNFKGVHGAESSKAATPA

Transcript Sequence

Transcript ID	Os01t0242300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7852689:7855760:1 gene:Os01g0242300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 family protein. (Os01t0242300-01)
Sequence	TACTGCTCCCCCCATCGAATCGAATCGAATCGAATCGAATCCCCTCACGATTCCACCAAT CCTCCGCCGCCGGAGGAGGAGGCCAGGGAATCGCCGCCGCCAATGTCGCTGCCGGTGGCG AAGCTGGGGACGCTGGCGCTGCGGACGCTGTCCAAGCCCATCGCCAGCCGCCTCAAGAAC CAGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCTGCATCGCGCAGATTAACCAT CGTGTTACTACAAGGATACAAAGGCGCATTTATGGGCATGCAACAGATGTGGAAATCACA CCTTTAAATGAGGAGAAAGCTGTACAAGCTGCTACGGATCTCATTGGAGAAGGCTTTATT TTTTCGGTTGCTGTTGCTGCTTTAATTTTTGAGGTGCAAAGAAATGCAAGGTCAGAGGCT AGGAAGGAGGAAGCTCGTAAACAGGAACTTGAGGAATTGAAACAACGGGAAGAGAGTTTA TCTAAAGATTTGGAGGATCTTAAACTGAGGCTTGCTGAAATTGAGCACCTCGCTAAAGGA CGAGGCCTTTCAGGAATCTTGAACTTCAAAGGTGTTCATGGAGCAGAAAGCAGCAAGGCA GCAACACCTGCTTGATCAATCAAATTAACTTGGGTCAGGCGAAACAGGATGATATTTTGT TAAGTTGATGCGCAAAACACCTCAAAATTTCACTGATCTGTTTTGTGATTCTTGTGTGGC AGTTCATTGCCATGCCCATTCTTTTGGTGTATGGATCAAAATATATGCCGGATGATCCAT AGACACCCTAAAATAATAGAGGCCAAGGATAGAAAAAGGCACTGTATCATGTAGATTACT TCTGGGTAAGTAACTATAGAACAAGTTCGAAAGAGTAAAAGTGAATGTGATATTGTACTT TGCTAACACATCACGCACATAGCTACGGCTGAACTGAATGCCTCCTTTTACTCTGTCT