Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0241000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7804166:7805788:1 gene:Os01g0241000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0241000-01)
Sequence

ATGAGCTTGACGGGGCATGGCGGCGGCGGCGGCGAGGGGACGGCGCCGGCGTTGGAGCTG
CTGGATGAGTACTGGTTCTTTAGCAACACGCTGGGGAAGAACGGGAGGCATGGCGGCGGC
GGCGGCGGCGGGGGTAGGCCGCCGATGCTGCCCAGGTCGCCGTCGACGGTGAGTGGTGGT
GGTGGGCGGCCGGGGAAAGGTGTGGAGGCGGTGGGGACGTCGAGGCTGTTCGCGTCCGCG
GGGCGGAGGCTCCTCCGGACGCCGTCGCTCCCGTCGCCGCGCGTCGGGATGGAGATCGCC
AAGGAGGACGAGGAGGTCGTCGAGGAGGCCCCGGCGGCGGCGGGCGGTGGTGGCGATCAG
GAAGCCGACGCGGAGGACGACGACCTGAACTGGAGCTCGATATACGAGGGCGTGCTCCGC
ACCAGGATCGCCGAGGAAGGTGTCAGGTCGGCGCTGCGGCGCGCGCCGTCGATGCCCGTC
ACGTCGTCCGCGACGGGGCGCGACGACGACGCCCGCCGCGAGGATACGGCGGCGGCCGCC
ACCGGGTCCACGACGCCGGGCATGTCCAGGCTCAGGCACGCCCACAGCACGCTGGAGAGA
CACTGCCGCTCGCACACGCCCACCACCAAGGCTGACCGGACGCCGAGAACGTCGGGCGGC
GGCGACGGCGGCCATCGGAGGCAGCCACCGCGGCGAGAGCTGCGGTCGTTCAGCGCGAAC
CAGCAGCCGCTCGTCCGGCACCAGAGCCTGTTCCACGACAAGAAGTGGAAGAGCTCGAGC
GACCTGGAGTCGATCGAGGTGCAGGGGTTCAGGGACCTGGGCTTCGTGTTCGACCAGGAG
GAGCTCCGCGAGAGCCTCGCCGACGTCCTCCCTGGCCTCCGCGGCAAGCCCACCCCCACC
GGCTCCGGCTCCGCCAGCGACAACGACGACGCAAACACAGCCACAACCGCCACCGGCAGC
GACGCCGTCGCCGCCGTGCGGCGGCCGTACCTGTCGGAGGCATGGTACCACGTGCGGCGG
CCGGCGCCCCGATCACCGGCGGCGGCGGCGATGAGGCTGCAGCAGGCGGACGCGAGGTCG
GCGGCGGAGATGAAGGACCAGCTTCGGATGTGGGCGCAGGCCGTGGCGTGCAACGTCCGA
CAAGAGTGTTAA

Peptide Sequence

PEP ID

Os01t0241000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7804166:7805788:1 gene:Os01g0241000 transcript:Os01t0241000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0241000-01)
Sequence

MSLTGHGGGGGEGTAPALELLDEYWFFSNTLGKNGRHGGGGGGGGRPPMLPRSPSTVSGG
GGRPGKGVEAVGTSRLFASAGRRLLRTPSLPSPRVGMEIAKEDEEVVEEAPAAAGGGGDQ
EADAEDDDLNWSSIYEGVLRTRIAEEGVRSALRRAPSMPVTSSATGRDDDARREDTAAAA
TGSTTPGMSRLRHAHSTLERHCRSHTPTTKADRTPRTSGGGDGGHRRQPPRRELRSFSAN
QQPLVRHQSLFHDKKWKSSSDLESIEVQGFRDLGFVFDQEELRESLADVLPGLRGKPTPT
GSGSASDNDDANTATTATGSDAVAAVRRPYLSEAWYHVRRPAPRSPAAAAMRLQQADARS
AAEMKDQLRMWAQAVACNVRQEC

Transcript Sequence

Transcript ID

Os01t0241000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7804166:7805788:1 gene:Os01g0241000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0241000-01)
Sequence

ATCGCTCTCGATCAGCTCAGCGTCGCGCCGCGCCACGCCACGCCACGCCACCCCACCACC
CACCCCGGCTTTGAGGCCAATCCGGAGTCGCCGGGCAGCCACGCAGCAGGCGGGCATGAG
CTTGACGGGGCATGGCGGCGGCGGCGGCGAGGGGACGGCGCCGGCGTTGGAGCTGCTGGA
TGAGTACTGGTTCTTTAGCAACACGCTGGGGAAGAACGGGAGGCATGGCGGCGGCGGCGG
CGGCGGGGGTAGGCCGCCGATGCTGCCCAGGTCGCCGTCGACGGTGAGTGGTGGTGGTGG
GCGGCCGGGGAAAGGTGTGGAGGCGGTGGGGACGTCGAGGCTGTTCGCGTCCGCGGGGCG
GAGGCTCCTCCGGACGCCGTCGCTCCCGTCGCCGCGCGTCGGGATGGAGATCGCCAAGGA
GGACGAGGAGGTCGTCGAGGAGGCCCCGGCGGCGGCGGGCGGTGGTGGCGATCAGGAAGC
CGACGCGGAGGACGACGACCTGAACTGGAGCTCGATATACGAGGGCGTGCTCCGCACCAG
GATCGCCGAGGAAGGTGTCAGGTCGGCGCTGCGGCGCGCGCCGTCGATGCCCGTCACGTC
GTCCGCGACGGGGCGCGACGACGACGCCCGCCGCGAGGATACGGCGGCGGCCGCCACCGG
GTCCACGACGCCGGGCATGTCCAGGCTCAGGCACGCCCACAGCACGCTGGAGAGACACTG
CCGCTCGCACACGCCCACCACCAAGGCTGACCGGACGCCGAGAACGTCGGGCGGCGGCGA
CGGCGGCCATCGGAGGCAGCCACCGCGGCGAGAGCTGCGGTCGTTCAGCGCGAACCAGCA
GCCGCTCGTCCGGCACCAGAGCCTGTTCCACGACAAGAAGTGGAAGAGCTCGAGCGACCT
GGAGTCGATCGAGGTGCAGGGGTTCAGGGACCTGGGCTTCGTGTTCGACCAGGAGGAGCT
CCGCGAGAGCCTCGCCGACGTCCTCCCTGGCCTCCGCGGCAAGCCCACCCCCACCGGCTC
CGGCTCCGCCAGCGACAACGACGACGCAAACACAGCCACAACCGCCACCGGCAGCGACGC
CGTCGCCGCCGTGCGGCGGCCGTACCTGTCGGAGGCATGGTACCACGTGCGGCGGCCGGC
GCCCCGATCACCGGCGGCGGCGGCGATGAGGCTGCAGCAGGCGGACGCGAGGTCGGCGGC
GGAGATGAAGGACCAGCTTCGGATGTGGGCGCAGGCCGTGGCGTGCAACGTCCGACAAGA
GTGTTAAAATCGGATCGATACATGGCGTCGACCGGACCAGACACACGATCACACGAGTTT
TTTTTTTTTTTACCGCGGAAACCAGAAGCACCAACTCGATGATACTACTACCATTTCAGT
AGTTGAGTTTTGTTACTTTCGCCTGCAAATTCCATTCCAATCCAAGAGGGTGATACTCCA
TCTAGGTAGATGTTCAGTGCTCTTCCCACCTTTTGTTTTTCTTTATATATCCTCCTTTGG
TTGATCTATGAATAATATGGCGGCAACCGCCCTATTCTTTTTGTT