Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0238700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:7673033:7676401:1 gene:Os01g0238700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 1 description:Oligopeptide transporter OPT superfamily protein. (Os01t0238700-01)
Sequence	ATGGCAGACCCCGCCGGCGCCGGCGGCGAGCAGGAGGCGCCGTCGGTGGAGGCGGCGTTC GCGGGGCAGCCGCCGCCGCCGTGGTGGCAGCAGGTGACGGTGCGGGCGGTGGCCGTGAGC GTGGTGCTCGGCACGCTGTTCAGCTTCATGGCGATGCGGACCGGCCTCACCGCCGGCTTC GTGCCGTCGTTCAACATGTCGGCGAGCCTCCTCAGCTTCTTCATCATCAAGTCGTGGACG CGGCTGATGGCACGCTGCGGCGTCGCCTCCCAGCCCTTCACAAGGCAGGAGAACGTCGTG GTGCAGACATGCGTGATCTCCTGCGCCACATTGTCAATCTACGGTGGTTTCACGAGCTAC CTGCTGGCGATGAACGAGACGGTGGCCAAGGCGGCCGGCGGAGGAACGGACGGCCGGAAT GTGTACACGTTGCACACCGGGAAGATCGTGGCCTTCCTCTTCCTCGTCACCTTCTCCAGC TTGTTCTGCACTCTGCCGCTGAGGAATACAATGATCGTGGACTACAAGCTGATATACCCA TCTGGTTCAGCCGTTGCCGGCATCGTCAACAGCTTCCACACACCCAAGGGAGCAACAAAA GCCAAATTGCAGGTCAATGCGATGTTCAAATCCGTGGCCGGGAGCTTCGCGTGGGCGTTC TTCCAGTGGTTCTACACGGGGGGAGACGGGTGCGGGTTCCATGCTTTCCCGCTGTTCGGG CTCGAGGCGTACAAGGAGAAGTTCTACTTCGACTTCTCGGCGAGCCTCGTCGGCGTCGGC ATGATCTGCCCCCACCTGATCAACTTCTCCATGCTCCTTGGGTCCATCTCCTCTTCCGGG TTCATCTGGCCCGCGTTACAGGCGAAGCAAGGGGAATGGTACACCGATCCTTCCCCGACC AGCTTCAAGGGAATCAATGGATACAAGGTGCCCATGGGGGTATCCATGGTGCTCGGGGAT TGCCTGTTCCAGCTAGGCGCCATCACTGTCAAGGCGGTGCAGCACTACCGCAAGGGGCGG CAGGAGCAGAAGCTCGCCGTCGATGGCGCGGCCGATGACGGCGGCGGCGGCTGTGTCCCC GACGACGACGACGAGAACAAGTGGCACGCCACGTACGACGAGCGGCGCAGGAACCAGGTG TTCCTGAGCGACGGGATCCCCGACCAATTCGCCGTCGCCGGGTACGTCGCGCTGGCGGCG CTCTCGACGGCGCTGGTGCCGCGCATCTTCCCGCAGATCCGGTACCACCACGTCGCCGTC TGCTACGCGGTGGCGCCGCTCCTGGCGTTCTGCAACTCGTACACCTCCGGGCTGATGGAC TGGTCGCTGGCGACGGTGTACGGGAAGCTCGCCATCTTCGTGGTCGGCGCGTCGGTCGGC GCCGCGTCGGGCGGCGTGATCGCCGGGCTCGCCGCGTGCGGCGTCATGATGGTGGTCATC GGCGACGCCGCGGAGCTGATGCACGACTTCAAGACGGCGTACCTGACGCTCACCTCGCCG GTGTCCATGTTCGCCAGCCAGGCGATCGGCACGGCGCTCGGCTGCGTCGTCAACCCGGCC GTCTTCCTCGCGTTCCGGTGGCTCGCCGGCGCGGAACACCCGCCGGGCGACCCCAGGTCG GCGTACGCGGCGCCGATGGCCGTCGCCTACCGCGGCATCGCCGTGCTCGGCGTGGAGGGC GTCGGCACCCTGCCGAGGCACGCCATCGCGCTGTGCGCCGCCTGCTTCGCCGCGGCGGTG TTCCTGGACACGGCGGGGGCGGCGGCGAGGGCGGCGCGGTGGAGGGTGGGGGGCTGGGTG CCGAACCCGATGGCCATGGCGATCCCGTTCTTCGTCGGGCCGACGTTCGCCATCGACATG TGCGTCGGCAGCCTGCTGCTGATGGCGTGGCGGAGGGCGGACAGGCAGGGCGCCGCGACG CTGGCCGTCGTGGTGGCGTCCGGGCTCATCTGCGGAGAAGGGCTGTGGACGCTGCCGTCG GCGGTGCTCGCCATGCTCAAGGTGCAGCCGCCCATCTGCATGAAGTTCCTCTCCAGAAGC CAGATCCAGGAGGTGCGGCAGCACTTCGTGCTCGGCGCCGCGGATATCCAGCCCGCGGTG ACGCTGACGCATCATCATCATCAATGA

Peptide Sequence

PEP ID	Os01t0238700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:7673033:7676401:1 gene:Os01g0238700 transcript:Os01t0238700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 1 description:Oligopeptide transporter OPT superfamily protein. (Os01t0238700-01)
Sequence	MADPAGAGGEQEAPSVEAAFAGQPPPPWWQQVTVRAVAVSVVLGTLFSFMAMRTGLTAGF VPSFNMSASLLSFFIIKSWTRLMARCGVASQPFTRQENVVVQTCVISCATLSIYGGFTSY LLAMNETVAKAAGGGTDGRNVYTLHTGKIVAFLFLVTFSSLFCTLPLRNTMIVDYKLIYP SGSAVAGIVNSFHTPKGATKAKLQVNAMFKSVAGSFAWAFFQWFYTGGDGCGFHAFPLFG LEAYKEKFYFDFSASLVGVGMICPHLINFSMLLGSISSSGFIWPALQAKQGEWYTDPSPT SFKGINGYKVPMGVSMVLGDCLFQLGAITVKAVQHYRKGRQEQKLAVDGAADDGGGGCVP DDDDENKWHATYDERRRNQVFLSDGIPDQFAVAGYVALAALSTALVPRIFPQIRYHHVAV CYAVAPLLAFCNSYTSGLMDWSLATVYGKLAIFVVGASVGAASGGVIAGLAACGVMMVVI GDAAELMHDFKTAYLTLTSPVSMFASQAIGTALGCVVNPAVFLAFRWLAGAEHPPGDPRS AYAAPMAVAYRGIAVLGVEGVGTLPRHAIALCAACFAAAVFLDTAGAAARAARWRVGGWV PNPMAMAIPFFVGPTFAIDMCVGSLLLMAWRRADRQGAATLAVVVASGLICGEGLWTLPS AVLAMLKVQPPICMKFLSRSQIQEVRQHFVLGAADIQPAVTLTHHHHQ

Transcript Sequence

Transcript ID	Os01t0238700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7673033:7676401:1 gene:Os01g0238700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 1 description:Oligopeptide transporter OPT superfamily protein. (Os01t0238700-01)
Sequence	GAAGGTAAACCAAAGATGGCAGACCCCGCCGGCGCCGGCGGCGAGCAGGAGGCGCCGTCG GTGGAGGCGGCGTTCGCGGGGCAGCCGCCGCCGCCGTGGTGGCAGCAGGTGACGGTGCGG GCGGTGGCCGTGAGCGTGGTGCTCGGCACGCTGTTCAGCTTCATGGCGATGCGGACCGGC CTCACCGCCGGCTTCGTGCCGTCGTTCAACATGTCGGCGAGCCTCCTCAGCTTCTTCATC ATCAAGTCGTGGACGCGGCTGATGGCACGCTGCGGCGTCGCCTCCCAGCCCTTCACAAGG CAGGAGAACGTCGTGGTGCAGACATGCGTGATCTCCTGCGCCACATTGTCAATCTACGGT GGTTTCACGAGCTACCTGCTGGCGATGAACGAGACGGTGGCCAAGGCGGCCGGCGGAGGA ACGGACGGCCGGAATGTGTACACGTTGCACACCGGGAAGATCGTGGCCTTCCTCTTCCTC GTCACCTTCTCCAGCTTGTTCTGCACTCTGCCGCTGAGGAATACAATGATCGTGGACTAC AAGCTGATATACCCATCTGGTTCAGCCGTTGCCGGCATCGTCAACAGCTTCCACACACCC AAGGGAGCAACAAAAGCCAAATTGCAGGTCAATGCGATGTTCAAATCCGTGGCCGGGAGC TTCGCGTGGGCGTTCTTCCAGTGGTTCTACACGGGGGGAGACGGGTGCGGGTTCCATGCT TTCCCGCTGTTCGGGCTCGAGGCGTACAAGGAGAAGTTCTACTTCGACTTCTCGGCGAGC CTCGTCGGCGTCGGCATGATCTGCCCCCACCTGATCAACTTCTCCATGCTCCTTGGGTCC ATCTCCTCTTCCGGGTTCATCTGGCCCGCGTTACAGGCGAAGCAAGGGGAATGGTACACC GATCCTTCCCCGACCAGCTTCAAGGGAATCAATGGATACAAGGTGCCCATGGGGGTATCC ATGGTGCTCGGGGATTGCCTGTTCCAGCTAGGCGCCATCACTGTCAAGGCGGTGCAGCAC TACCGCAAGGGGCGGCAGGAGCAGAAGCTCGCCGTCGATGGCGCGGCCGATGACGGCGGC GGCGGCTGTGTCCCCGACGACGACGACGAGAACAAGTGGCACGCCACGTACGACGAGCGG CGCAGGAACCAGGTGTTCCTGAGCGACGGGATCCCCGACCAATTCGCCGTCGCCGGGTAC GTCGCGCTGGCGGCGCTCTCGACGGCGCTGGTGCCGCGCATCTTCCCGCAGATCCGGTAC CACCACGTCGCCGTCTGCTACGCGGTGGCGCCGCTCCTGGCGTTCTGCAACTCGTACACC TCCGGGCTGATGGACTGGTCGCTGGCGACGGTGTACGGGAAGCTCGCCATCTTCGTGGTC GGCGCGTCGGTCGGCGCCGCGTCGGGCGGCGTGATCGCCGGGCTCGCCGCGTGCGGCGTC ATGATGGTGGTCATCGGCGACGCCGCGGAGCTGATGCACGACTTCAAGACGGCGTACCTG ACGCTCACCTCGCCGGTGTCCATGTTCGCCAGCCAGGCGATCGGCACGGCGCTCGGCTGC GTCGTCAACCCGGCCGTCTTCCTCGCGTTCCGGTGGCTCGCCGGCGCGGAACACCCGCCG GGCGACCCCAGGTCGGCGTACGCGGCGCCGATGGCCGTCGCCTACCGCGGCATCGCCGTG CTCGGCGTGGAGGGCGTCGGCACCCTGCCGAGGCACGCCATCGCGCTGTGCGCCGCCTGC TTCGCCGCGGCGGTGTTCCTGGACACGGCGGGGGCGGCGGCGAGGGCGGCGCGGTGGAGG GTGGGGGGCTGGGTGCCGAACCCGATGGCCATGGCGATCCCGTTCTTCGTCGGGCCGACG TTCGCCATCGACATGTGCGTCGGCAGCCTGCTGCTGATGGCGTGGCGGAGGGCGGACAGG CAGGGCGCCGCGACGCTGGCCGTCGTGGTGGCGTCCGGGCTCATCTGCGGAGAAGGGCTG TGGACGCTGCCGTCGGCGGTGCTCGCCATGCTCAAGGTGCAGCCGCCCATCTGCATGAAG TTCCTCTCCAGAAGCCAGATCCAGGAGGTGCGGCAGCACTTCGTGCTCGGCGCCGCGGAT ATCCAGCCCGCGGTGACGCTGACGCATCATCATCATCAATGATATAATATACTGGAGTAC TCATCATCAGCTTGTAAATTGGCGGGAATGATCATATTGTTTTGAATTGTGAGTAGGAGC ACTATGCCTGCTGAAAAGTGAGAAGTGAAAACTGCTGGTGTTGAACAAATCAAGCACATG AAAACGAAAACCTAATATGGACCAGGGACTACCTATACATTTG