Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0238500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:7665477:7668076:1 gene:Os01g0238500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor. (Os01t0238500-01);Similar to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor. (Os01t0238500-02)
Sequence	ATGGGCTCCTACGTTCAAGGCGAGGATGAGGTTCCCGTGTACGAATCTGGAGCAGAGATC GTCCAGAAGCTGCAGGAGAAATGGAAGTCGACGGCGGCGCCGTTCCCGGCGATGTACTCG AGCGTGCTCGGCGGCATCATCCTGGACCCGGCGATGATGTCCGTCCCGCTCGACGACCAC ATGGTCCACCGCGGCCACGGCGTGTTCGACACCGCCATGATCCTCGACGGCCACCTCTAC GAGCTCGACCCGCACCTCGACCGCTTCCTCCGCTCCGCCGCCAAGGCCCGCATCGGCACC CCGTTCCCGCGCGACACGCTCCGCAGCATCCTCGTCCAGATGACGGCGGCGTCCAACTGC CGGAGGGGGTCCATCCGCTACTGGCTCAGCGCCGGCGGCGGCGACTTCCTCCTGTCCTCC GCCGGCTGCGCCGGGCCGGCGTTCTACGCCGTCGTCATCCCGACCGACTACTCCCAGTGC CGCCACGGCGTGCGCGCGGTGACCACGTCGGTGCCCATGAAGCCGCCGCTGTTCGCCACC ATGAAGAACGTCAACTACCTCCCCAACGTGCTGTCCATCATGGACGCCGAGGACCGCGGC GCGTTCGCGTCGGTGTGGGTGGACGGCGAGGGCAACGTCGCCGAGGGGCCCATGGTGAAC GTGGCGTTCGTCACGGCCGCCGGCGAGCTGGTGCTCCCGGCGTTCGACAAGATCCTCGCC GGGTGCACCGCCAAGCGGCTGCTCGCGCTGGCGCCGAGGCTGGTGGAGTCCGGCCTCCTC AAGGCCGTCACCACCCGCCACATCGCCGCCGACGAGGCCAAGCGCTGCTCCGCCGAGATG GCGTTCGTCGGCAGCGGCCTCCCCGTCCTGCCCATCGTCGAGTGGGACGACCAGCTCATC GGCGACGGGAAGGTGGGGAAGACGATGATGGCGCTGTCGGATCTGCTCTGGGAGGACATG AAATCGGGGCCGGACAGGATCGCAGTCCCGTACAAGTGA

Peptide Sequence

PEP ID	Os01t0238500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:7665477:7668076:1 gene:Os01g0238500 transcript:Os01t0238500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor. (Os01t0238500-01);Similar to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor. (Os01t0238500-02)
Sequence	MGSYVQGEDEVPVYESGAEIVQKLQEKWKSTAAPFPAMYSSVLGGIILDPAMMSVPLDDH MVHRGHGVFDTAMILDGHLYELDPHLDRFLRSAAKARIGTPFPRDTLRSILVQMTAASNC RRGSIRYWLSAGGGDFLLSSAGCAGPAFYAVVIPTDYSQCRHGVRAVTTSVPMKPPLFAT MKNVNYLPNVLSIMDAEDRGAFASVWVDGEGNVAEGPMVNVAFVTAAGELVLPAFDKILA GCTAKRLLALAPRLVESGLLKAVTTRHIAADEAKRCSAEMAFVGSGLPVLPIVEWDDQLI GDGKVGKTMMALSDLLWEDMKSGPDRIAVPYK

Transcript Sequence

Transcript ID	Os01t0238500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7665477:7668076:1 gene:Os01g0238500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor. (Os01t0238500-01);Similar to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor. (Os01t0238500-02)
Sequence	ACCTCTCCTCCCCCGGCAATCAAAGACACACCCCAAGTACTCGATCGCCTGTGTAGCTTC TTCCCTGATCGTGCCATGGGCTCCTACGTTCAAGGCGAGGATGAGGTTCCCGTGTACGAA TCTGGAGCAGAGATCGTCCAGAAGCTGCAGGAGAAATGGAAGTCGACGGCGGCGCCGTTC CCGGCGATGTACTCGAGCGTGCTCGGCGGCATCATCCTGGACCCGGCGATGATGTCCGTC CCGCTCGACGACCACATGGTCCACCGCGGCCACGGCGTGTTCGACACCGCCATGATCCTC GACGGCCACCTCTACGAGCTCGACCCGCACCTCGACCGCTTCCTCCGCTCCGCCGCCAAG GCCCGCATCGGCACCCCGTTCCCGCGCGACACGCTCCGCAGCATCCTCGTCCAGATGACG GCGGCGTCCAACTGCCGGAGGGGGTCCATCCGCTACTGGCTCAGCGCCGGCGGCGGCGAC TTCCTCCTGTCCTCCGCCGGCTGCGCCGGGCCGGCGTTCTACGCCGTCGTCATCCCGACC GACTACTCCCAGTGCCGCCACGGCGTGCGCGCGGTGACCACGTCGGTGCCCATGAAGCCG CCGCTGTTCGCCACCATGAAGAACGTCAACTACCTCCCCAACGTGCTGTCCATCATGGAC GCCGAGGACCGCGGCGCGTTCGCGTCGGTGTGGGTGGACGGCGAGGGCAACGTCGCCGAG GGGCCCATGGTGAACGTGGCGTTCGTCACGGCCGCCGGCGAGCTGGTGCTCCCGGCGTTC GACAAGATCCTCGCCGGGTGCACCGCCAAGCGGCTGCTCGCGCTGGCGCCGAGGCTGGTG GAGTCCGGCCTCCTCAAGGCCGTCACCACCCGCCACATCGCCGCCGACGAGGCCAAGCGC TGCTCCGCCGAGATGGCGTTCGTCGGCAGCGGCCTCCCCGTCCTGCCCATCGTCGAGTGG GACGACCAGCTCATCGGCGACGGGAAGGTGGGGAAGACGATGATGGCGCTGTCGGATCTG CTCTGGGAGGACATGAAATCGGGGCCGGACAGGATCGCAGTCCCGTACAAGTGATGGATT ATTGGAGTTGGGTGAGGCTCCTCGGGCGTACGTCAGAAAGAGGTGTGCTACCGACGTGTG GATTCATGACGGTAAGCTTCACCTGTTAGGGATTCACGTCTCTTCGACTTTATATGAGAG GAGCTACGTCCATCGGAGATAGGAGGAGAAGGGCAACGTGCCGAGTATATATGTGTAGTG TACGTACGCGTGAGCGAGCTGAGATGGATATGATGCAGTATCGTGTCGTTTCGTTTCGTT TCTCCTTGTGTTCATGTGTGGTTTGTATGGTTTTTTATCTGTACGTGTCGTCAACGTAAT CCTTGTATTTTGCGGTGTATCAGTACTGTATGAGTGTATGTGTTTATCGATTGATCATTA AGTGAATGAAT