Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0237000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7588191:7589529:1 gene:Os01g0237000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os01t0237000-01)
Sequence

ATGTTCTCCGCCAAGGCTCGGTGGATCGTCGCCGTCGTGCTCAGGGTGGCCGCCGCCGGC
GCCGCGGCGGTCGCGGCGGTGCTCATGGCCATGAGCCATGATGAGGTCATCGTCTACGGC
ATGGAGGTGCAGGCCAAGTTCCGCTACACTCCATCGCTAGTGTTCTTCGTCGCCGCCAAC
GCCGCCGTGAGCGCGTGCAGCTTGGTCGTCCTGCTCGTGCCGTCGTCGACGAGCAAGCTC
GCCGCGAGGCTGCTGCTGATGGCCGACGTGGTGCTCGGCATGGTGCTCGCCGGCGCGTTC
GCGGCGGCGGGCGCCATGGCGGAGCTGGGGAAGAACGGCAACAGCCACGCCGGCTGGATC
GCGATCTGTGTCCAGGTGCCGCTCTTCTGCGACCGCGTCAGGTCGGCTCTCGTCGCCGGC
TCCGCCACCATCGTCCTCTACTACCTCATGCTCATGTACTCCATTTACACACTCCCCATG
TTCCCATGA

Peptide Sequence

PEP ID

Os01t0237000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7588191:7589529:1 gene:Os01g0237000 transcript:Os01t0237000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os01t0237000-01)
Sequence

MFSAKARWIVAVVLRVAAAGAAAVAAVLMAMSHDEVIVYGMEVQAKFRYTPSLVFFVAAN
AAVSACSLVVLLVPSSTSKLAARLLLMADVVLGMVLAGAFAAAGAMAELGKNGNSHAGWI
AICVQVPLFCDRVRSALVAGSATIVLYYLMLMYSIYTLPMFP

Transcript Sequence

Transcript ID

Os01t0237000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7588191:7589529:1 gene:Os01g0237000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os01t0237000-01)
Sequence

AATCCATCACATCACGAAACCACTTCATGTACTCTTAACATTATCTGCTTGTACCCTTAT
CATTATCTTGAGCATTTCATAGTTTCAAATACACATATTGCCGCCCTCTCTCCCTCTCAG
GCTCTCAGTGTGTCAATCACCTTGTAACACACATCCACACACAAACACACACACAAAGAT
GTTCTCCGCCAAGGCTCGGTGGATCGTCGCCGTCGTGCTCAGGGTGGCCGCCGCCGGCGC
CGCGGCGGTCGCGGCGGTGCTCATGGCCATGAGCCATGATGAGGTCATCGTCTACGGCAT
GGAGGTGCAGGCCAAGTTCCGCTACACTCCATCGCTAGTGTTCTTCGTCGCCGCCAACGC
CGCCGTGAGCGCGTGCAGCTTGGTCGTCCTGCTCGTGCCGTCGTCGACGAGCAAGCTCGC
CGCGAGGCTGCTGCTGATGGCCGACGTGGTGCTCGGCATGGTGCTCGCCGGCGCGTTCGC
GGCGGCGGGCGCCATGGCGGAGCTGGGGAAGAACGGCAACAGCCACGCCGGCTGGATCGC
GATCTGTGTCCAGGTGCCGCTCTTCTGCGACCGCGTCAGGTCGGCTCTCGTCGCCGGCTC
CGCCACCATCGTCCTCTACTACCTCATGCTCATGTACTCCATTTACACACTCCCCATGTT
CCCATGAGCATCTCTACTACTAGCTTTTTAGCTTTTTAGAGTAGTAGAGGTGTCGTTCTA
AATTTAGAGTCAGTAGTACTCTCTCCGTTCTAAAATAAATTAATTTTTATTTATGTACAG
AATTATGTACAGAATTTTATTTATTTTGAGATAGAGTAGGTGCTTGTAAGTGAGATTAAC
AGCCTGTTTTTTTAAGAGGTTTCTTATTATTCTTGGAGAGTTATATAGCCGTTGGATAAA
AATGCCACGGACGTCTGTGCCTCTTCAAGAATGGGAGAAAATCTCTTATTTTTTTTATAT
GTTTTCTTGTAAAGGCTTTTCTATAGTAGTGATGATCAAACGTTATAGTATG