Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0236800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:7578100:7582923:-1 gene:Os01g0236800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-amylase 4 description:Similar to predicted protein. (Os01t0236800-01)
Sequence	ATGGCGGCGATCGCCGCGCCTCCGCCGCAGCCTCACCCACCCGCGTCCGCCCACCACCAC CACCACCATCGCCGCCGCGCCCGTCTCCCCCGCCTCGCCGCCGCCTCCTCCTCCTCCTCC TCTTCCCGCTTCCGCCGCCGCTTCTCCTCTTCCTCCTCATCCTCATCCCCTTCGTCCGCG CCCTCACCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATGGGGGAAGC GGAGGGGGAGGCGGGGGAGAGATCCACTACGCGTCGCCGCCGCCGCCGCCCCCGGCGGCG CCGACGGGGGCGCCCGTGTACGTGACGCTCCCGGCGGACGCCGTGGGGCCGGGGGGCGGG GTGGCGCGGCGGCGCGCCATGGCGGCGTCGCTCGCGGCGCTGGCGGGGGCAGGGGTGGCC GGGGTGGCGGTCGAGCTGTGGTGGGGGGTCGTGGAGCGGCAGGGGCCCGGGGTGTACGAC TGGGCGGGGTACCTCGAGCTCGCCGCCATGGCGCGCCGCTACGGCCTCCGCGTGCGCGCC ATCCTCGCCTTCCACCAGTGCGGCGCCGGCCCGCACGACCCTCCATGGATCCCTCTACCT CAATGGGTACTTGAGGAGATGGATAAGTTGCCAGACTTGTCATATATGGATAGATACCAA CGAAGAAATAAAGAATACATCTCACTCGGGTGTGATATTCTTCCGATTCTGAAGGGAAGA TCACCAATGCAGGCTTATTCAGACTTCATGAGGAGCTTTCGAGATGCTTTTAAAGAGTAC CTTGGGGCTATAGTGACAGAAGTTCAAATTGGAATGGGCCCAGGAGGTGAACTTAGGTAT CCATCATGCCCAACTGAGACACTAAGTCAAGCAGGCATCTCATCTGAACTCGGGGAGTTT CAATGTTATGACAAGTTCATGCAAGCATCCCTGAGTGCTCGTGCACAACTTATTGGCATG CAAGATTGGGGAAACGGTGGTCCAGCCGGCACAGATGGCTCACGACAGAACCCTGAAGAA ACTAGTTTTTTCCGTGCTGATGGTGGATGCTGGAATACTCCTTATGGTCGGTTTTTCCTT GAGTGGTATTCAGGAATGCTGCTTCTTCATGGAGAGAGATTATGTATGGTTGCTGATGCT GTCTTCTCTGGTTCCGGTGTGACCATCGCCGGAAAGGTTTCTGGAATACATTGGCACTAC TATACATGTTCGCACCCATCGGAACTGACTGCTGGTTACTACAACACATTGTTGAGGAAC GGTTATCTTCCTATCACCCAAATGTTTGCTAGATACAAGGCTGCCTTGTGCTGCAGTTGC TTTGACCTGAGGGATGAGGAGAGAAATAACTCCAAGAGCAGCCCAGAAGGTACTCTCCGG CAACTTATGGTCGCCGCCAAGATGTGCAATCTACCTCTGAACGGCGAAAACTCCGTGACA AGGCTCGACGATACGTCGCTGAATCAAGTCATCAGAAGCTCAAGGCTCTACTCAGGTGGC ACCTCAGGGACATCTTTCTCCTTCAACTATGTCAGAATGAACAAGAGCCTGTTTGAGTTT CACAACTGGAACAGGTTCACCAAGTTCGTCAGGCAGATGTCGGATGCCAGGACATTTCTA GCCAGGCTCGAGTTCAGGAGAGGGCAGCATTACCTCTCCTCGATGTCGGTTGTCTGGGTC GTCAGCCGGGCCTGTGCATAG

Peptide Sequence

PEP ID	Os01t0236800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:7578100:7582923:-1 gene:Os01g0236800 transcript:Os01t0236800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-amylase 4 description:Similar to predicted protein. (Os01t0236800-01)
Sequence	MAAIAAPPPQPHPPASAHHHHHHRRRARLPRLAAASSSSSSSRFRRRFSSSSSSSSPSSA PSPSPSSSSSSSSSSSYGGSGGGGGGEIHYASPPPPPPAAPTGAPVYVTLPADAVGPGGG VARRRAMAASLAALAGAGVAGVAVELWWGVVERQGPGVYDWAGYLELAAMARRYGLRVRA ILAFHQCGAGPHDPPWIPLPQWVLEEMDKLPDLSYMDRYQRRNKEYISLGCDILPILKGR SPMQAYSDFMRSFRDAFKEYLGAIVTEVQIGMGPGGELRYPSCPTETLSQAGISSELGEF QCYDKFMQASLSARAQLIGMQDWGNGGPAGTDGSRQNPEETSFFRADGGCWNTPYGRFFL EWYSGMLLLHGERLCMVADAVFSGSGVTIAGKVSGIHWHYYTCSHPSELTAGYYNTLLRN GYLPITQMFARYKAALCCSCFDLRDEERNNSKSSPEGTLRQLMVAAKMCNLPLNGENSVT RLDDTSLNQVIRSSRLYSGGTSGTSFSFNYVRMNKSLFEFHNWNRFTKFVRQMSDARTFL ARLEFRRGQHYLSSMSVVWVVSRACA

Transcript Sequence

Transcript ID	Os01t0236800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7578100:7582923:-1 gene:Os01g0236800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-amylase 4 description:Similar to predicted protein. (Os01t0236800-01)
Sequence	AGAGCTGAGAGAACAGCGGAGGAGAAGCAAAGCTCACCACCACCAATGGCGGCGATCGCC GCGCCTCCGCCGCAGCCTCACCCACCCGCGTCCGCCCACCACCACCACCACCATCGCCGC CGCGCCCGTCTCCCCCGCCTCGCCGCCGCCTCCTCCTCCTCCTCCTCTTCCCGCTTCCGC CGCCGCTTCTCCTCTTCCTCCTCATCCTCATCCCCTTCGTCCGCGCCCTCACCCTCCCCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATGGGGGAAGCGGAGGGGGAGGCGGG GGAGAGATCCACTACGCGTCGCCGCCGCCGCCGCCCCCGGCGGCGCCGACGGGGGCGCCC GTGTACGTGACGCTCCCGGCGGACGCCGTGGGGCCGGGGGGCGGGGTGGCGCGGCGGCGC GCCATGGCGGCGTCGCTCGCGGCGCTGGCGGGGGCAGGGGTGGCCGGGGTGGCGGTCGAG CTGTGGTGGGGGGTCGTGGAGCGGCAGGGGCCCGGGGTGTACGACTGGGCGGGGTACCTC GAGCTCGCCGCCATGGCGCGCCGCTACGGCCTCCGCGTGCGCGCCATCCTCGCCTTCCAC CAGTGCGGCGCCGGCCCGCACGACCCTCCATGGATCCCTCTACCTCAATGGGTACTTGAG GAGATGGATAAGTTGCCAGACTTGTCATATATGGATAGATACCAACGAAGAAATAAAGAA TACATCTCACTCGGGTGTGATATTCTTCCGATTCTGAAGGGAAGATCACCAATGCAGGCT TATTCAGACTTCATGAGGAGCTTTCGAGATGCTTTTAAAGAGTACCTTGGGGCTATAGTG ACAGAAGTTCAAATTGGAATGGGCCCAGGAGGTGAACTTAGGTATCCATCATGCCCAACT GAGACACTAAGTCAAGCAGGCATCTCATCTGAACTCGGGGAGTTTCAATGTTATGACAAG TTCATGCAAGCATCCCTGAGTGCTCGTGCACAACTTATTGGCATGCAAGATTGGGGAAAC GGTGGTCCAGCCGGCACAGATGGCTCACGACAGAACCCTGAAGAAACTAGTTTTTTCCGT GCTGATGGTGGATGCTGGAATACTCCTTATGGTCGGTTTTTCCTTGAGTGGTATTCAGGA ATGCTGCTTCTTCATGGAGAGAGATTATGTATGGTTGCTGATGCTGTCTTCTCTGGTTCC GGTGTGACCATCGCCGGAAAGGTTTCTGGAATACATTGGCACTACTATACATGTTCGCAC CCATCGGAACTGACTGCTGGTTACTACAACACATTGTTGAGGAACGGTTATCTTCCTATC ACCCAAATGTTTGCTAGATACAAGGCTGCCTTGTGCTGCAGTTGCTTTGACCTGAGGGAT GAGGAGAGAAATAACTCCAAGAGCAGCCCAGAAGGTACTCTCCGGCAACTTATGGTCGCC GCCAAGATGTGCAATCTACCTCTGAACGGCGAAAACTCCGTGACAAGGCTCGACGATACG TCGCTGAATCAAGTCATCAGAAGCTCAAGGCTCTACTCAGGTGGCACCTCAGGGACATCT TTCTCCTTCAACTATGTCAGAATGAACAAGAGCCTGTTTGAGTTTCACAACTGGAACAGG TTCACCAAGTTCGTCAGGCAGATGTCGGATGCCAGGACATTTCTAGCCAGGCTCGAGTTC AGGAGAGGGCAGCATTACCTCTCCTCGATGTCGGTTGTCTGGGTCGTCAGCCGGGCCTGT GCATAGACATGAATCAGAATTGGCAAAGTGACTGCTAGAAATGTAGTGTTGTTCGTGTAT CTGTAACTTGGATCATGAATGTGATTCGACAGAATTGGAAGAGAACTTTGTGC