Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0236300-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:7547049:7551856:1 gene:Os01g0236300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 16 description:Similar to Auxin response factor 18. (Os01t0236300-01);Similar to Auxin response factor 18. (Os01t0236300-02)
Sequence	ATGTCGTCGCAAGGAGCAGGAGGAGGGGTAGGGGACCCGGAGCTGTTCGCGGAGCTGTGG CGGGCCTGCGCGGGGCCGCTGGTGGAGGTGCCGCAGCGGGACGAGCGGGTGTTCTACTTC CTCCAGGGCCACCTCGAGCAGCTGCAAGAGCCGACGGACCCGGCGCTGCTGGCGGAGCAA ATCAAGATGTTCCAGGTGCCGTACAAGATCCTCTGCAAGGTCGTCAACGTCGAGCTCAAG GCCGAGACGGAAACCGACGAGGTGTTCGCGCAGATTACCCTGCAGCCTGACCCGGATCAA GAGAATCTGCCAACATTACCTGACCCGCCCCTGCCGGAGCAGCCGAGGCCTGTGGTGCAC TCCTTCTGCAAGATCCTGACCCCATCCGACACCAGCACCCATGGCGGGTTCTCCGTGCTC CGACGGCATGCCAACGAGTGCCTCCCGCCACTGGATATGTCCATGGCGACACCAACCCAA GAGCTCATCACAAAGGACCTTCATGGATCTGAGTGGAGGTTTAAGCACATCTACAGGGGC CAACCCCGTAGGCATCTTCTGACTACTGGATGGAGCACGTTTGTGACATCGAAGAAGCTG ATTTCTGGCGACGCGTTTGTCTACTTGAGGAGTGAGACAGGAGAGCAGCGTGTCGGAGTG AGGCGTCTTGTGCAGAAACAGAGCACAATGCCGGCATCTGTTATATCAAGCCAAAGCATG CATCTTGGTGTGCTTGCAAGTGCATCTCATGCTATCAAGACTAATTCAATTTTCCTAGTG TACTACAGGCCAAGGTTAAGCCAAAGCCAATATATTGTTAGTGTGAATAAGTACCTTGCG GCTAGTAAGGTTGGATTTAATGTGGGCATGAGGTTCAAGATGAGTTTTGAAGGGGAAGAC GTCCCGGTTAAAAAGTTTTCTGGAACTATAGTTGGTGAAGGTGATCTTTCTCTGCAGTGG TCAGGTTCTGAATGGAAGTCCTTGAAGGTCCAATGGGATGAAGTCACAAATGTTAATGGC CCTGAGAGGGTTTCCCCTTGGGAAATTGAAACATGTGATGGCACTGCACCTGCCATCAAT GTACCCCTGCAGTCAGCAACGAAAAACAAGCGGCCTAGGGAGCCAAGTGAAACTATTGAC CTTCAATCACTGGAACCAGCTCAAGAGTTTTGGCTATCTGGAATGCCACAACAGCATGAG AAGACAGGTATTGGTTCCAGTGAACCTAATTGTATCTCTGGACATCAAGTTGTTTGGCCA GGCGAGCATCCAGGATATGGTGCCGTGAGTAGTTCAGTTTGTCAGAATCCGCTAGTACTT GAAAGTTGGTTGAAGGATTTCAACTCTTCAAACAAGGGTGTCTCCCCTACCTTGTCAGAG ATTTCTCAGAAAATTTTTCAGGTTACCAGCAATGAAGCAAGAATTGCTACATGGCCTGCA CGTTCTGCTTACCAAGCTGAGGAGCCCACTTCCAAGTTGTCTTCGAACACCGCTGCCTGT GGTTACCGAACTGAAGAAGTTGCTCCAAATGCGTCCAAGGTTGTTGAAGGAAAAAAGGAA CCTGCCATGTTTCGTCTGTTTGGTGTGGATTTGATGAAATGTACCAGCATATCTACTACC ACTGATGACAAGTCAAGTGTGGGAGCAGGAGAAGCTTCAGCCAAAGGTACTGGTTCTCAC GAAGACTCTGGTCAGCTGTCAGCATTCTCAAAAGTGACAAAAGAGCATATTGCTGCGGAT GAAAGCCCCCAAGAGATCCAAAGCCATCAGAATTACACCGCTAGAACTCGCATAAAGGTT CAAATGCATGGAAATGCTGTGGGCAGAGCTGTGGATCTAGCTAATCTAGACGGATATGAG CAACTGATGAATGAGCTGGAAGAGATGTTCAATATAAAGGACCTCAAACAAAAATGGAAG GTGGCTTTCACTGATGATGAGGGTGACACAATGGAAGTTGGAGATGATCCTTGGCTGGAA TTTTGCCAGATGGTCAGAAAGATTGTGCTCTATCCCATTGAAGACGAGAAGAAGATCGAG CCTCACCCGAAGTTACTGTCTTCAGCTAATCCAGAGCAGGATCAGAAGACTGGGTTTTAG

Peptide Sequence

PEP ID	Os01t0236300-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:7547049:7551856:1 gene:Os01g0236300 transcript:Os01t0236300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 16 description:Similar to Auxin response factor 18. (Os01t0236300-01);Similar to Auxin response factor 18. (Os01t0236300-02)
Sequence	MSSQGAGGGVGDPELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQ IKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVH SFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRG QPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSM HLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGED VPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAIN VPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIGSSEPNCISGHQVVWP GEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQVTSNEARIATWPA RSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMKCTSISTT TDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQNYTARTRIKV QMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKDLKQKWKVAFTDDEGDTMEVGDDPWLE FCQMVRKIVLYPIEDEKKIEPHPKLLSSANPEQDQKTGF

Transcript Sequence

Transcript ID	Os01t0236300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7547049:7551856:1 gene:Os01g0236300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 16 description:Similar to Auxin response factor 18. (Os01t0236300-01);Similar to Auxin response factor 18. (Os01t0236300-02)
Sequence	ACTTCGCTCGCTCCCTCGGTCGCTCGGCCGCCATGTCGTCGCAAGGAGCAGGAGGAGGGG TAGGGGACCCGGAGCTGTTCGCGGAGCTGTGGCGGGCCTGCGCGGGGCCGCTGGTGGAGG TGCCGCAGCGGGACGAGCGGGTGTTCTACTTCCTCCAGGGCCACCTCGAGCAGCTGCAAG AGCCGACGGACCCGGCGCTGCTGGCGGAGCAAATCAAGATGTTCCAGGTGCCGTACAAGA TCCTCTGCAAGGTCGTCAACGTCGAGCTCAAGGCCGAGACGGAAACCGACGAGGTGTTCG CGCAGATTACCCTGCAGCCTGACCCGGATCAAGAGAATCTGCCAACATTACCTGACCCGC CCCTGCCGGAGCAGCCGAGGCCTGTGGTGCACTCCTTCTGCAAGATCCTGACCCCATCCG ACACCAGCACCCATGGCGGGTTCTCCGTGCTCCGACGGCATGCCAACGAGTGCCTCCCGC CACTGGATATGTCCATGGCGACACCAACCCAAGAGCTCATCACAAAGGACCTTCATGGAT CTGAGTGGAGGTTTAAGCACATCTACAGGGGCCAACCCCGTAGGCATCTTCTGACTACTG GATGGAGCACGTTTGTGACATCGAAGAAGCTGATTTCTGGCGACGCGTTTGTCTACTTGA GGAGTGAGACAGGAGAGCAGCGTGTCGGAGTGAGGCGTCTTGTGCAGAAACAGAGCACAA TGCCGGCATCTGTTATATCAAGCCAAAGCATGCATCTTGGTGTGCTTGCAAGTGCATCTC ATGCTATCAAGACTAATTCAATTTTCCTAGTGTACTACAGGCCAAGGTTAAGCCAAAGCC AATATATTGTTAGTGTGAATAAGTACCTTGCGGCTAGTAAGGTTGGATTTAATGTGGGCA TGAGGTTCAAGATGAGTTTTGAAGGGGAAGACGTCCCGGTTAAAAAGTTTTCTGGAACTA TAGTTGGTGAAGGTGATCTTTCTCTGCAGTGGTCAGGTTCTGAATGGAAGTCCTTGAAGG TCCAATGGGATGAAGTCACAAATGTTAATGGCCCTGAGAGGGTTTCCCCTTGGGAAATTG AAACATGTGATGGCACTGCACCTGCCATCAATGTACCCCTGCAGTCAGCAACGAAAAACA AGCGGCCTAGGGAGCCAAGTGAAACTATTGACCTTCAATCACTGGAACCAGCTCAAGAGT TTTGGCTATCTGGAATGCCACAACAGCATGAGAAGACAGGTATTGGTTCCAGTGAACCTA ATTGTATCTCTGGACATCAAGTTGTTTGGCCAGGCGAGCATCCAGGATATGGTGCCGTGA GTAGTTCAGTTTGTCAGAATCCGCTAGTACTTGAAAGTTGGTTGAAGGATTTCAACTCTT CAAACAAGGGTGTCTCCCCTACCTTGTCAGAGATTTCTCAGAAAATTTTTCAGGTTACCA GCAATGAAGCAAGAATTGCTACATGGCCTGCACGTTCTGCTTACCAAGCTGAGGAGCCCA CTTCCAAGTTGTCTTCGAACACCGCTGCCTGTGGTTACCGAACTGAAGAAGTTGCTCCAA ATGCGTCCAAGGTTGTTGAAGGAAAAAAGGAACCTGCCATGTTTCGTCTGTTTGGTGTGG ATTTGATGAAATGTACCAGCATATCTACTACCACTGATGACAAGTCAAGTGTGGGAGCAG GAGAAGCTTCAGCCAAAGGTACTGGTTCTCACGAAGACTCTGGTCAGCTGTCAGCATTCT CAAAAGTGACAAAAGAGCATATTGCTGCGGATGAAAGCCCCCAAGAGATCCAAAGCCATC AGAATTACACCGCTAGAACTCGCATAAAGGTTCAAATGCATGGAAATGCTGTGGGCAGAG CTGTGGATCTAGCTAATCTAGACGGATATGAGCAACTGATGAATGAGCTGGAAGAGATGT TCAATATAAAGGACCTCAAACAAAAATGGAAGGTGGCTTTCACTGATGATGAGGGTGACA CAATGGAAGTTGGAGATGATCCTTGGCTGGAATTTTGCCAGATGGTCAGAAAGATTGTGC TCTATCCCATTGAAGACGAGAAGAAGATCGAGCCTCACCCGAAGTTACTGTCTTCAGCTA ATCCAGAGCAGGATCAGAAGACTGGGTTTTAGGAGGGAGGCTAGGGCTGAAAGGTGGATT TTTTAGCCTTTCACCATTGAAGCGTTGGTGGCTATCGTTTTGTCGTTGGAGATGGTCGTA GCTGAAAAAATGGTGGCTACTGGCTAGTTCATCGTATTGATGCAACAGATTTGTTGCTGG TGTCAAAACTGTTTCTTCACAAGCATTTTGAAGAACAAATTGATGTAACATAGGTTTCAA GAAAAAAAAAGATTTGACAATGTCTCTTTAGTAGTTTGCTCAAGTTTAGTCAAAACCTTA ATGGTGCTTAAGGAATAACGTGAAGCTATAAAACTGGTGTGTAAGTTCTGTAAATATTAT AAGGGAGATTATAATTTTGTGATATTAGCTTTCACCCTTTAATTTATTGGTATATATTG