Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0235800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7507583:7511672:1 gene:Os01g0235800 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology domain containing protein. (Os01t0235800-01)
Sequence

GTGCTAGACAGCCAAGTAGGTTGGCTTTTGGGAAAGAATGGTAGTGTGATTAAGCAAATG
TCTACTGACAGCTGTTGTGAAATTCGAGTTTCAAAGGACAAGCTTCCATTATGTGCTTTA
CCCCGAGATGAACTTTGCCAGATCACTGGAGAGCTCGACTCAGTCAGGAAAGGTCTGAAT
ACAGTTGCTCAGTTGCTATTTACTCATCCTCCTAAGGAGAGTGATGTTCTTGGTGCTCAT
AATTCTGGTTCATCTCGTTCATTCTTCAATCAACCAGATGTTCTTCCTCCAGGAATGCAA
CCTAATCTCCATCTCCCTTTTCAAGGGCCAAATGTTGCTCATCTTCCCAATTTTCCTGAA
GCTCTAATGCATGGCCATGGCTCAGTCCCACCTGAACCCCTTACTTTTAGGTTGTTATGC
TCAAGTGACAAGGTTGGAGGTATAATAGGGAAGGGTGGAAACAATATCAAGTCTATTCAG
AATGATACAGGCTGTGAAATAAAGGTTCTTGATACTGTTCCAAAATCTGAAGATCGCATC
GTATTTATCTCAGGACCTGCGCATCCGGGTGATGGAATTTCCCCTGCACAGAATGCAATT
CTGCATGTGCAGCGTAAAATTGTACCGACCTCCAACACCAAGGAGGGTCCTGCGATATGT
AGGCTGATTGTTTCACCGAACCAAGTTGGTTGCCTTCTTGGCAAAGGTGGTAGTATCATA
GCTGAAATGAGGAAGCTATCAGGAGCACATATTATAGTGCTGAGCAAAGACAAGATCCCA
AAGGGTGTCCCAGAAAATGATGAAGTTGTTCAGATTAGTGGGGCCTCTGAAGCTATTCAG
GAAGCTCTAATGCAGATAACTGCAAGACTGCGGAACCATCTTTTCCGGGACAGAATGGCT
TCAACAGTCCCTAATGTGCAGCCACCTTTTGGTTTGGTGGATCCTCAGTTTGGTTCATAT
GCGGGAAACCATGATTCTATATCTCCTAGGATTTTTCCTAATGTGCCTCAGTTTCATAAA
GATTTTATAGGACGACCATTGGATGAGATGTCTGCTCCTTGGACCATGAAGGGCATGCAG
GTTGTTGGTGATCCAATTTCATTGCCTGATATCCCAGGAATGGCGCATAGAGGAATGGGT
GGATTTCCTGGGCCTGGTCAGCCATCTATCGTATCAACCATAACTGCAGATGTCATGGTC
CCAAAATTAGTTTTACCTTCTCTATGTGGGGAAGATGGAGGCTGTTTAAACAGAATTCGT
GAGTTTTCAGGGGCTAAGATAACTGTCGCAGATCCGATGGGTAATGCAATGGACACTGCT
ATTTTGATATCCGGCACACCAGACCAGATGCATGCAGCCCGAAGTCTTATTCAAGCATTT
GTCCTAAGTGAACCACTAGCCCCCTGA

Peptide Sequence

PEP ID

Os01t0235800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7507583:7511672:1 gene:Os01g0235800 transcript:Os01t0235800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology domain containing protein. (Os01t0235800-01)
Sequence

VLDSQVGWLLGKNGSVIKQMSTDSCCEIRVSKDKLPLCALPRDELCQITGELDSVRKGLN
TVAQLLFTHPPKESDVLGAHNSGSSRSFFNQPDVLPPGMQPNLHLPFQGPNVAHLPNFPE
ALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRI
VFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGGSII
AEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMA
STVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNVPQFHKDFIGRPLDEMSAPWTMKGMQ
VVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIR
EFSGAKITVADPMGNAMDTAILISGTPDQMHAARSLIQAFVLSEPLAP

Transcript Sequence

Transcript ID

Os01t0235800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7507583:7511672:1 gene:Os01g0235800 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology domain containing protein. (Os01t0235800-01)
Sequence

GTGCTAGACAGCCAAGTAGGTTGGCTTTTGGGAAAGAATGGTAGTGTGATTAAGCAAATG
TCTACTGACAGCTGTTGTGAAATTCGAGTTTCAAAGGACAAGCTTCCATTATGTGCTTTA
CCCCGAGATGAACTTTGCCAGATCACTGGAGAGCTCGACTCAGTCAGGAAAGGTCTGAAT
ACAGTTGCTCAGTTGCTATTTACTCATCCTCCTAAGGAGAGTGATGTTCTTGGTGCTCAT
AATTCTGGTTCATCTCGTTCATTCTTCAATCAACCAGATGTTCTTCCTCCAGGAATGCAA
CCTAATCTCCATCTCCCTTTTCAAGGGCCAAATGTTGCTCATCTTCCCAATTTTCCTGAA
GCTCTAATGCATGGCCATGGCTCAGTCCCACCTGAACCCCTTACTTTTAGGTTGTTATGC
TCAAGTGACAAGGTTGGAGGTATAATAGGGAAGGGTGGAAACAATATCAAGTCTATTCAG
AATGATACAGGCTGTGAAATAAAGGTTCTTGATACTGTTCCAAAATCTGAAGATCGCATC
GTATTTATCTCAGGACCTGCGCATCCGGGTGATGGAATTTCCCCTGCACAGAATGCAATT
CTGCATGTGCAGCGTAAAATTGTACCGACCTCCAACACCAAGGAGGGTCCTGCGATATGT
AGGCTGATTGTTTCACCGAACCAAGTTGGTTGCCTTCTTGGCAAAGGTGGTAGTATCATA
GCTGAAATGAGGAAGCTATCAGGAGCACATATTATAGTGCTGAGCAAAGACAAGATCCCA
AAGGGTGTCCCAGAAAATGATGAAGTTGTTCAGATTAGTGGGGCCTCTGAAGCTATTCAG
GAAGCTCTAATGCAGATAACTGCAAGACTGCGGAACCATCTTTTCCGGGACAGAATGGCT
TCAACAGTCCCTAATGTGCAGCCACCTTTTGGTTTGGTGGATCCTCAGTTTGGTTCATAT
GCGGGAAACCATGATTCTATATCTCCTAGGATTTTTCCTAATGTGCCTCAGTTTCATAAA
GATTTTATAGGACGACCATTGGATGAGATGTCTGCTCCTTGGACCATGAAGGGCATGCAG
GTTGTTGGTGATCCAATTTCATTGCCTGATATCCCAGGAATGGCGCATAGAGGAATGGGT
GGATTTCCTGGGCCTGGTCAGCCATCTATCGTATCAACCATAACTGCAGATGTCATGGTC
CCAAAATTAGTTTTACCTTCTCTATGTGGGGAAGATGGAGGCTGTTTAAACAGAATTCGT
GAGTTTTCAGGGGCTAAGATAACTGTCGCAGATCCGATGGGTAATGCAATGGACACTGCT
ATTTTGATATCCGGCACACCAGACCAGATGCATGCAGCCCGAAGTCTTATTCAAGCATTT
GTCCTAAGTGAACCACTAGCCCCCTGATATTTCAAATACCTGAAGGTAGTGACCATGGAC
TGGTTGAGTTGCTGGTGATGATGATTGTGTGGGCAATGAAGCTAGTGACCTTATGTGTTC
ATATTTATGAATATGCGTGCCCTGTTTGCAGACTTGCATATGGTCGAAGAGGCTAATTAT
GCTGAATAGTGACTAAATTTCAACATGATGGATCTTTGCTAGGTTCTTTGGAAAATATCC
CAGTCTTTTCATTGTGAGATAGAAATGCTATGGTTAGCTGCACAGTTCTCTTTTCATGCA
AGCTATATGCTTGGAGCTTGAAAGCTTCAAACTTTTTTTTGTATGATGAGCCCATCATGT
TGATTTTCTAAACTTATATTAAGGAAACTAGCCTAATTATTGC