Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0235700-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:7495121:7498178:-1 gene:Os01g0235700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 008, OsMYC2-like protein 2, MYC2-like protein 2 description:Similar to BHLH transcription factor (Fragment). (Os01t0235700-01);Similar to BHLH transcription factor (Fragment). (Os01t0235700-02)
Sequence	ATGGTGATGAAGATGGAGGCTGATGAGGATGGTGCCAATGGCGGAACTGGTGGGACATGG ACTGACGAGGACCGAGCGCTCACCGCCAGTGTGCTTGGAACGGATGCTTTTGCTTACTTG ACAAAAGGAGGTGGTGCCATATCCGAGGGCCTTGTTGCTGCATCTTTGCCAGTGGACTTG CAAAATAGACTCCAGGAGCTTGTCGAATCAGATCGTCCTGGTGCTGGTTGGAACTATGCC ATATTCTGGCAGCTGTCGCGCACAAAGTCCGGTGACCTTGTCCTTGGATGGGGGGATGGC TCTTGCCGTGAGCCTCATGATGGTGAGATGGGACCTGCTGCTTCTGCAGGTAGTGACGAG GCCAAACAGAGGATGCGCAAGCGTGTGCTGCAGCGATTGCACTCAGCATTCGGAGGTGTT GACGAGGAGGATTATGCCCCAGGCATTGATCAGGTGACAGACACAGAGATGTTTTTTCTA GCATCTATGTACTTTGCATTTCCACGCCGTGCTGGTGGCCCTGGTCAAGTATTTGCAGCA GGCGTGCCCCTGTGGATTCCCAACACTGAACGTAACGTATTTCCTGCCAATTACTGTTAC CGGGGATACCTTGCAAATGCTGCAGGATTTAGAACTATTGTGCTAGTTCCATTTGAGACC GGTGTACTTGAACTGGGTTCGATGCAACAGGTAGCGGAGAGTTCTGACACTCTCCAGACC ATAAGATCTGTGTTTGCTGGGGCAATTGGCAATAAAGCTGGAGTTCAGAGACACGAGGGG AGTGGCCCTACAGATAAGTCACCAGGTTTGGCAAAGATTTTTGGGAAGGACCTTAACCTT GGCCGGCCTTCAGCAGGCCCAGGAACTGGCGTGTCAGAGGCAGATGAAAGGTCGTGGGAA CAAAGGACTGGTGGTGGGAGCTCATTGCTCCCCAATGTCCAAAGAGGTTTGCAGAATTTC ACTTGGAGTCAGGCTCGGGGCCTGAATTCTCATCAGCAGAAGTTTGGCAACGGTATATTG ATTGTGAGCAATGAAGCCACACCGCGCAACAATGGAGGAGTTGACAGCTCTACTGCAACA CAGTTTCAGCTTCAGAAAGCACCACCACTTCAGAAACTACCACAGCTCCAGAAATCACAT CAGCTAGTAAAGCCACAGCAACTAGTGAGTCAGCAACAGTTGCAGCCTCAAGCTCCCAGG CAAATAGATTTCAGTGCTGGGACCAGTTCCAAACCTGGTGTTTTGACTAAAAAACCAGCT GGTATTGATGGGGATGGTGCAGAGGTGGATGGCTTGTGTAAAGACGAAGGTCCGCCACCT GCATTAGAAGACCGGCGGCCTAGAAAGAGGGGAAGAAAGCCTGCAAACGGGAGGGAAGAG CCACTAAATCATGTTGAGGCCGAGCGCCAGAGGAGGGAGAAGCTCAACCAGCGATTCTAT GCACTGAGAGCCGTTGTACCCAATATATCAAAAATGGACAAGGCATCCCTCCTTGGTGAC GCCATAACATACATCACTGACCTACAGAAGAAGCTCAAAGAGATGGAGGTAGAGCGAGAA AGGCTTATCGAGTCTGGAATGATCGATCCGAGGGATCGGACGCCTCGACCTGAGGTGGAC ATTCAGGTGGTTCAGGATGAGGTTCTAGTCCGAGTGATGAGCCCCATGGAAAGCCACCCT GTCAGGGCCATCTTCCAAGCTTTCGAAGAGGCAGAAGTCCATGCAGGGGAGTCGAAGATC ACAAGCAACAACGGCACGGCCGTGCATTCTTTCATCATCAAGTGCCCTGGCGCCGAACAG CAAACGAGGGAGAAGGTGATTGCCGCCATGTCTCGCGTGATGAACTCAGGGTAG

Peptide Sequence

PEP ID	Os01t0235700-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:7495121:7498178:-1 gene:Os01g0235700 transcript:Os01t0235700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 008, OsMYC2-like protein 2, MYC2-like protein 2 description:Similar to BHLH transcription factor (Fragment). (Os01t0235700-01);Similar to BHLH transcription factor (Fragment). (Os01t0235700-02)
Sequence	MVMKMEADEDGANGGTGGTWTDEDRALTASVLGTDAFAYLTKGGGAISEGLVAASLPVDL QNRLQELVESDRPGAGWNYAIFWQLSRTKSGDLVLGWGDGSCREPHDGEMGPAASAGSDE AKQRMRKRVLQRLHSAFGGVDEEDYAPGIDQVTDTEMFFLASMYFAFPRRAGGPGQVFAA GVPLWIPNTERNVFPANYCYRGYLANAAGFRTIVLVPFETGVLELGSMQQVAESSDTLQT IRSVFAGAIGNKAGVQRHEGSGPTDKSPGLAKIFGKDLNLGRPSAGPGTGVSEADERSWE QRTGGGSSLLPNVQRGLQNFTWSQARGLNSHQQKFGNGILIVSNEATPRNNGGVDSSTAT QFQLQKAPPLQKLPQLQKSHQLVKPQQLVSQQQLQPQAPRQIDFSAGTSSKPGVLTKKPA GIDGDGAEVDGLCKDEGPPPALEDRRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY ALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLIESGMIDPRDRTPRPEVD IQVVQDEVLVRVMSPMESHPVRAIFQAFEEAEVHAGESKITSNNGTAVHSFIIKCPGAEQ QTREKVIAAMSRVMNSG

Transcript Sequence

Transcript ID	Os01t0235700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7495121:7498178:-1 gene:Os01g0235700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 008, OsMYC2-like protein 2, MYC2-like protein 2 description:Similar to BHLH transcription factor (Fragment). (Os01t0235700-01);Similar to BHLH transcription factor (Fragment). (Os01t0235700-02)
Sequence	GAGGGTGCTCGGATTCAGCCAGCGGCGGGTGGGGGGGCCCGCCTCTTTCTTCTTGGGGGG GCGCGGAGGAGACCCCGCCCGTCCTGGATTCCGTGGCCGCGGCGCCGATTCGGGCGCGGG AGCCCCAGCACGGTATTATGGTGATGAAGATGGAGGCTGATGAGGATGGTGCCAATGGCG GAACTGGTGGGACATGGACTGACGAGGACCGAGCGCTCACCGCCAGTGTGCTTGGAACGG ATGCTTTTGCTTACTTGACAAAAGGAGGTGGTGCCATATCCGAGGGCCTTGTTGCTGCAT CTTTGCCAGTGGACTTGCAAAATAGACTCCAGGAGCTTGTCGAATCAGATCGTCCTGGTG CTGGTTGGAACTATGCCATATTCTGGCAGCTGTCGCGCACAAAGTCCGGTGACCTTGTCC TTGGATGGGGGGATGGCTCTTGCCGTGAGCCTCATGATGGTGAGATGGGACCTGCTGCTT CTGCAGGTAGTGACGAGGCCAAACAGAGGATGCGCAAGCGTGTGCTGCAGCGATTGCACT CAGCATTCGGAGGTGTTGACGAGGAGGATTATGCCCCAGGCATTGATCAGGTGACAGACA CAGAGATGTTTTTTCTAGCATCTATGTACTTTGCATTTCCACGCCGTGCTGGTGGCCCTG GTCAAGTATTTGCAGCAGGCGTGCCCCTGTGGATTCCCAACACTGAACGTAACGTATTTC CTGCCAATTACTGTTACCGGGGATACCTTGCAAATGCTGCAGGATTTAGAACTATTGTGC TAGTTCCATTTGAGACCGGTGTACTTGAACTGGGTTCGATGCAACAGGTAGCGGAGAGTT CTGACACTCTCCAGACCATAAGATCTGTGTTTGCTGGGGCAATTGGCAATAAAGCTGGAG TTCAGAGACACGAGGGGAGTGGCCCTACAGATAAGTCACCAGGTTTGGCAAAGATTTTTG GGAAGGACCTTAACCTTGGCCGGCCTTCAGCAGGCCCAGGAACTGGCGTGTCAGAGGCAG ATGAAAGGTCGTGGGAACAAAGGACTGGTGGTGGGAGCTCATTGCTCCCCAATGTCCAAA GAGGTTTGCAGAATTTCACTTGGAGTCAGGCTCGGGGCCTGAATTCTCATCAGCAGAAGT TTGGCAACGGTATATTGATTGTGAGCAATGAAGCCACACCGCGCAACAATGGAGGAGTTG ACAGCTCTACTGCAACACAGTTTCAGCTTCAGAAAGCACCACCACTTCAGAAACTACCAC AGCTCCAGAAATCACATCAGCTAGTAAAGCCACAGCAACTAGTGAGTCAGCAACAGTTGC AGCCTCAAGCTCCCAGGCAAATAGATTTCAGTGCTGGGACCAGTTCCAAACCTGGTGTTT TGACTAAAAAACCAGCTGGTATTGATGGGGATGGTGCAGAGGTGGATGGCTTGTGTAAAG ACGAAGGTCCGCCACCTGCATTAGAAGACCGGCGGCCTAGAAAGAGGGGAAGAAAGCCTG CAAACGGGAGGGAAGAGCCACTAAATCATGTTGAGGCCGAGCGCCAGAGGAGGGAGAAGC TCAACCAGCGATTCTATGCACTGAGAGCCGTTGTACCCAATATATCAAAAATGGACAAGG CATCCCTCCTTGGTGACGCCATAACATACATCACTGACCTACAGAAGAAGCTCAAAGAGA TGGAGGTAGAGCGAGAAAGGCTTATCGAGTCTGGAATGATCGATCCGAGGGATCGGACGC CTCGACCTGAGGTGGACATTCAGGTGGTTCAGGATGAGGTTCTAGTCCGAGTGATGAGCC CCATGGAAAGCCACCCTGTCAGGGCCATCTTCCAAGCTTTCGAAGAGGCAGAAGTCCATG CAGGGGAGTCGAAGATCACAAGCAACAACGGCACGGCCGTGCATTCTTTCATCATCAAGT GCCCTGGCGCCGAACAGCAAACGAGGGAGAAGGTGATTGCCGCCATGTCTCGCGTGATGA ACTCAGGGTAGAATCAGTTGGGGAGTGGGCGCCACCGGTAGAGGCAGCTTTACTTCGTTC GCTGGTTGCAGACAAGCAGCAAGCAGTCGGTTGGACGGACACCCATCCACCCACCTTTCA GCGCTGTTGATAGAAGAAGTTTGTAGGCAGAGAAAGAAAGCTCAGATTCTGACTTAGCGA TCCAAGGGGAAGACAAAGCTCTCAAGTTAAAACTGCCATTGTTGTATGGTAGGCTTTTGT GGTCGGTGTAGTTTTTCTCTTTTTGTTGTTTATTGGGGAGAATACCATGTTCTTAGTTTA TTGCTTGTGGCAGAACCATAAACAGTACATCTCGTCAAATGCATGAGTTGGGAAAGAAGT CACCTGCTTTTCTGCT