Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0235200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:7460350:7465499:-1 gene:Os01g0235200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0235200-01);Conserved hypothetical protein. (Os01t0235200-02)
Sequence

ATGGCGGTTCAATCTGCAGAGCGCGGCGTGGAGGCTCCACCTCTGACGCTGTCGATATTC
GAGTTCAACAGTAAGGTGATGCAGGACGAGCTGCAGAAGCTGGCGCTCAAGGTGAACCAC
CACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCTCAATGCCGTCGAGGACTCGTGCGCT
GACCTGGGCATTAAAATAGGCAATTATTATTCATCGATGGCGGCAATTGCAAATAATGAC
ACATCTGTTGAAGAAGCTGAACAACGCACTATTCAAAGTATACTCAAACAGGACGAGACA
GCAGCTGGGATTATATGCCAACTGAAGATTCGTCATTATCAGCATGCATCAAAGCTGCCA
CTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTTGGGAAAAATAAATAATGACAACCTC
AGCAGGGTACTCTCAGAGTACTTGGGATTGGACAATATGCTTGGTGTCGTCTGCAAGACT
TATGATGGTGTCGAGGGTCTTGAAACATATGACAAGGAAGGTATGGTTGATAAAACCAGT
GGCATTCATGGACTAGGTCGCACAATTGGAAAATTTTTAGATGGAAGATTCACTGTCTTT
TGTCTTGAAAATATAAGGCCATTTTCTGGTGATTTTATGATCGATGATCCTCAGAGGAAA
CTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGAGTTCCCACCTGGTTTTCTTGGTTTT
GCAGTAAATATGATACATTTGGACCAGGCAAATTTGAGTTGTCTCACAGCTGGGGGCCAC
GGTCTTAGGGAAACTTTATTTTACAGCCTGTTTTCTCAGTTGCAAGTCTATAAGACTAGA
GCTGAATTGCGAAATGCTATTCCTTTGATAAATGATGGTGCTGTTTCTCTTGATGGGTCT
ATACTAAGACCTAATGGCTCATTCTGCCTAGGTAATAGGGCAAGCTTAGGAATACAATTT
CCTGTAACTGCAAATCTTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAG
CAAGTTAAACATAAGAATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAA
GATTTGTTGAACCAAGTTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTAT
ATCACTCAACCAGGAATGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCA
GCTACTCCTGGAAGCAATCCATTTGGATCAAGGCCTCCCCACCTGCGAGGAAGATAA

Peptide Sequence

PEP ID

Os01t0235200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:7460350:7465499:-1 gene:Os01g0235200 transcript:Os01t0235200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0235200-01);Conserved hypothetical protein. (Os01t0235200-02)
Sequence

MAVQSAERGVEAPPLTLSIFEFNSKVMQDELQKLALKVNHHEENIRFLKSELNAVEDSCA
DLGIKIGNYYSSMAAIANNDTSVEEAEQRTIQSILKQDETAAGIICQLKIRHYQHASKLP
LMKDVLGVVATLGKINNDNLSRVLSEYLGLDNMLGVVCKTYDGVEGLETYDKEGMVDKTS
GIHGLGRTIGKFLDGRFTVFCLENIRPFSGDFMIDDPQRKLLLHKPRLPSGEFPPGFLGF
AVNMIHLDQANLSCLTAGGHGLRETLFYSLFSQLQVYKTRAELRNAIPLINDGAVSLDGS
ILRPNGSFCLGNRASLGIQFPVTANLGVSNLPVTITELEEQVKHKNWEKERLLEDIKRQE
DLLNQVKDLFSKKKEQFMAYITQPGMLQRASQASPTIPSPATPGSNPFGSRPPHLRGR

Transcript Sequence

Transcript ID

Os01t0235200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7460350:7465499:-1 gene:Os01g0235200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0235200-01);Conserved hypothetical protein. (Os01t0235200-02)
Sequence

CTCTGTCGCGCGCGCTCCTTCCTCCCGTCTCCTCTCCTCTCCTCCGCTCCTCGCGCGCGC
CATCTCGCGGAGGGGATCCTGATCTGCAAGAAGTTCTTCTCTTAATTTCAGAGCCTTAAT
AACAGTTTGAGTTTGTTTGTTCCCCCGCAAAAAAGAGTTTGGGGGGGTTCAATTGAAGTT
GGATCCGCCGCCCCTGCAGATTTGGTCGCCTAGCTTCCTTACCTATGGCGGTTCAATCTG
CAGAGCGCGGCGTGGAGGCTCCACCTCTGACGCTGTCGATATTCGAGTTCAACAGTAAGG
TGATGCAGGACGAGCTGCAGAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCA
GGTTTCTCAAGTCGGAGCTCAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAA
TAGGCAATTATTATTCATCGATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAG
CTGAACAACGCACTATTCAAAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATAT
GCCAACTGAAGATTCGTCATTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCC
TTGGTGTCGTAGCTACCTTGGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAG
AGTACTTGGGATTGGACAATATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGG
GTCTTGAAACATATGACAAGGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAG
GTCGCACAATTGGAAAATTTTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAA
GGCCATTTTCTGGTGATTTTATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAAC
CAAGGTTGCCTAGTGGAGAGTTCCCACCTGGTTTTCTTGGTTTTGCAGTAAATATGATAC
ATTTGGACCAGGCAAATTTGAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTT
TATTTTACAGCCTGTTTTCTCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATG
CTATTCCTTTGATAAATGATGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATG
GCTCATTCTGCCTAGGTAATAGGGCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATC
TTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGA
ATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAG
TTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAA
TGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCA
ATCCATTTGGATCAAGGCCTCCCCACCTGCGAGGAAGATAATAGAGCAGGTAGCGAAGAA
TTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTAATTTGTTGAAATGCGTGTGGTT
TCAGAACTTTCCTGCTGGATGATGCAAGGAATTTTTGTTTTGAACATGGTGTAGAAAGCA
GCTTTATCATCAATGAAGAAACCCAACTTTGATGAGAATTTACCAGTTTC