Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0234100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7417303:7422388:1 gene:Os01g0234100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os01t0234100-01)
Sequence

ATGGCGATAGATCAGCCCATCAAAAAGAGAGGGAGACCACCAGGTTCCAAGAACACGAAG
AACAAGATGGAGCAGAAGATGGAACTAGTCCATCAAAGGCTCGCCTTACTTGACAGCAGC
AGTGGCAGCGACAGGGATGACGATATTGGGCCGAGGGCTATAATAATTGATTGTGATGAA
GATGATACGGATGACGTGATGGAGGTTGTTCCTTTGAAAATGCTGATGCCAAAGGAGGTG
GAAAATGAGCAAAGAACGGTTCCTGGCATTCCTCAAACATGCAATACCCAGAACACTAGC
AATGGACGCACTAACACCACTGAAGTGCCAGTTAAGGGCCAAAATAAATGTGCAAGTTAT
CTTCCAAAAAAATCTAGTGTTCAGGCGTTCTGTGGATCTGCTATGAAGAGAGCTCAAGAG
ATTCAAACGAAGTTACCAGCAGAGCATCCTAGCTTTGTTAAACATATGTTACATTCACAT
GTTGTCAGCGGATTTTGGCTGGGTCTACCAGCTGGCTTCTGCAACAAGTATCTCCCAAAG
CATGACACTGACATTGTGCTCGAAGATGAGAATGGGAACAACCATAACACAAATTACCTG
GGTGGTAAGCAGGGACTCAGTGCTGGATGGAGAGGTTTTGCGATTAACCATGATATCAAG
GTTGGCGATGTTGTGGTCTTTGAGCTTGTGAGCACAACAAAATTCAAGGTGCATATAATT
AGAGATAAAAACATCAGCCCAACTGACAGAGCACCCGGTCTCAAGAGTTTTTACGCCTGC
AAGAAACGGAAGATATCTAAAGAAGCTACTGATAATGCCACCAAGCCTAAGGAGGATCCA
GAGACTACTAGAGTCAGTAGCAAAGTGGCTCATGATGATACCCAGAATCTAGTTCATGAA
GCAATAGACGGCATCAGGTTTTCAGACTCAGAGATGAGCTTTGACGACGTGATGAGCTAC
AGTAACTTCAACATCGTCGTGGACGGCTTGGTCATTGACTGCAAGTTCCCCGATCACCAG
CGCAGGACGTACTATGAGCTGTGCTGCGCCCAGAAGTCGTTCCTCCACAGGCATCTGCTG
AGGCAGCTGAGCCTCACGCTCGTCGTGGGGGTGATCATGGAGACGATCAACATCGCTGAG
GGCATCAGGGCCTGCGGGGCGGGTACCTCCTCGCAAGAGGACTTCCTGATCTGGAAGAAG
ACGCTGCAGTCATTCGACCTGCTGGGAATGAATGTTGCGTTCTTGCTCAAGCGCGTTGAC
GATATTCTCGGCCTCCCCGAGCAACCGAGGGATCCATCGGAGTGTAGCAAGTACAATGAG
CTGAAGCTTGAGCGGTCTCGTGCTGGGGAGAAGGTGAAGGCTCTGGAGTCCATGATGTTG
ACAGTGAAGGATGTGCTGAAGAAGATCGATGCCGAGATGGAGGAGATGGAGTCGAGCGTG
AGGAACCATGACATTGCGCTGCGGAAGATCGCCACTGCGCCATGGTGA

Peptide Sequence

PEP ID

Os01t0234100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7417303:7422388:1 gene:Os01g0234100 transcript:Os01t0234100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os01t0234100-01)
Sequence

MAIDQPIKKRGRPPGSKNTKNKMEQKMELVHQRLALLDSSSGSDRDDDIGPRAIIIDCDE
DDTDDVMEVVPLKMLMPKEVENEQRTVPGIPQTCNTQNTSNGRTNTTEVPVKGQNKCASY
LPKKSSVQAFCGSAMKRAQEIQTKLPAEHPSFVKHMLHSHVVSGFWLGLPAGFCNKYLPK
HDTDIVLEDENGNNHNTNYLGGKQGLSAGWRGFAINHDIKVGDVVVFELVSTTKFKVHII
RDKNISPTDRAPGLKSFYACKKRKISKEATDNATKPKEDPETTRVSSKVAHDDTQNLVHE
AIDGIRFSDSEMSFDDVMSYSNFNIVVDGLVIDCKFPDHQRRTYYELCCAQKSFLHRHLL
RQLSLTLVVGVIMETINIAEGIRACGAGTSSQEDFLIWKKTLQSFDLLGMNVAFLLKRVD
DILGLPEQPRDPSECSKYNELKLERSRAGEKVKALESMMLTVKDVLKKIDAEMEEMESSV
RNHDIALRKIATAPW

Transcript Sequence

Transcript ID

Os01t0234100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7417303:7422388:1 gene:Os01g0234100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os01t0234100-01)
Sequence

ACTTGCGCGGAGCTGAAGAGCCGGCTCGTTCCTCTCCTTCCCGTTCACATTTCAAAACCT
CAAAGCCCCCACAAACTTCGGAATCGAGGTGAGCGGGAGTTCGGAGAGATCAACCCGAGG
GCCGCCGGCCGATGGCGATAGATCAGCCCATCAAAAAGAGAGGGAGACCACCAGGTTCCA
AGAACACGAAGAACAAGATGGAGCAGAAGATGGAACTAGTCCATCAAAGGCTCGCCTTAC
TTGACAGCAGCAGTGGCAGCGACAGGGATGACGATATTGGGCCGAGGGCTATAATAATTG
ATTGTGATGAAGATGATACGGATGACGTGATGGAGGTTGTTCCTTTGAAAATGCTGATGC
CAAAGGAGGTGGAAAATGAGCAAAGAACGGTTCCTGGCATTCCTCAAACATGCAATACCC
AGAACACTAGCAATGGACGCACTAACACCACTGAAGTGCCAGTTAAGGGCCAAAATAAAT
GTGCAAGTTATCTTCCAAAAAAATCTAGTGTTCAGGCGTTCTGTGGATCTGCTATGAAGA
GAGCTCAAGAGATTCAAACGAAGTTACCAGCAGAGCATCCTAGCTTTGTTAAACATATGT
TACATTCACATGTTGTCAGCGGATTTTGGCTGGGTCTACCAGCTGGCTTCTGCAACAAGT
ATCTCCCAAAGCATGACACTGACATTGTGCTCGAAGATGAGAATGGGAACAACCATAACA
CAAATTACCTGGGTGGTAAGCAGGGACTCAGTGCTGGATGGAGAGGTTTTGCGATTAACC
ATGATATCAAGGTTGGCGATGTTGTGGTCTTTGAGCTTGTGAGCACAACAAAATTCAAGG
TGCATATAATTAGAGATAAAAACATCAGCCCAACTGACAGAGCACCCGGTCTCAAGAGTT
TTTACGCCTGCAAGAAACGGAAGATATCTAAAGAAGCTACTGATAATGCCACCAAGCCTA
AGGAGGATCCAGAGACTACTAGAGTCAGTAGCAAAGTGGCTCATGATGATACCCAGAATC
TAGTTCATGAAGCAATAGACGGCATCAGGTTTTCAGACTCAGAGATGAGCTTTGACGACG
TGATGAGCTACAGTAACTTCAACATCGTCGTGGACGGCTTGGTCATTGACTGCAAGTTCC
CCGATCACCAGCGCAGGACGTACTATGAGCTGTGCTGCGCCCAGAAGTCGTTCCTCCACA
GGCATCTGCTGAGGCAGCTGAGCCTCACGCTCGTCGTGGGGGTGATCATGGAGACGATCA
ACATCGCTGAGGGCATCAGGGCCTGCGGGGCGGGTACCTCCTCGCAAGAGGACTTCCTGA
TCTGGAAGAAGACGCTGCAGTCATTCGACCTGCTGGGAATGAATGTTGCGTTCTTGCTCA
AGCGCGTTGACGATATTCTCGGCCTCCCCGAGCAACCGAGGGATCCATCGGAGTGTAGCA
AGTACAATGAGCTGAAGCTTGAGCGGTCTCGTGCTGGGGAGAAGGTGAAGGCTCTGGAGT
CCATGATGTTGACAGTGAAGGATGTGCTGAAGAAGATCGATGCCGAGATGGAGGAGATGG
AGTCGAGCGTGAGGAACCATGACATTGCGCTGCGGAAGATCGCCACTGCGCCATGGTGAT
CCTGCTTGACATCTGGGGTACTTGTCTGAAACATTTTGGGTTCGTCATTCAGGGTTTCAG
ATGATGATGATGATGATGATGCACTGGGAAACCTTCGTGGTGAGTGACTGAGTGGTGAAT
CCTGCTAAACTCAAGGACTGACCACATTTTTGTGTACATTTCTTCAGTTACTACCACGCA
GCTCAGTGCCTATCTAGAACTGTTCAGCAGCAAACCTGTCTAGGAATCAGGATGCTGTTT
TTACACGGTAAATCGTATAACAGAAGTTGTAAATTTTGGGGGGCGAATGCGCTGTAAGCA
GTGCAGGAAATGCGAGGAAGAAATGCAGAACACTACTTAATTATTTCAGACTCCGTCATT
CAGTGC