Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0233500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:7389373:7393708:-1 gene:Os01g0233500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-A1-1 description:Cyclin. (Os01t0233500-01)
Sequence	ATGTCGAGCAACCTAGCAGCCTCCCGCCGCTCGTCGTCGTCGTCCTCGGTGGCGGCGGCG GCGGCGGCGAAGCGACCCGCGGTGGGGGAGGGAGGAGGAGGAGGAGGAGGGAAGGCGGCA GCGGGCGCCGCCGCGGCAAAGAAGCGCGTGGCGCTTAGCAACATCAGCAACGTCGCCGCT GGTGGTGGCGCCCCAGGGAAGGCCGGCAATGCGAAGTTGAATTTAGCTGCCTCAGCTGCA CCAGTGAAGAAGGGATCTTTGGCCAGTGGCCGCAATGTGGGCACGAATCGGGCCTCGGCG GTGAAATCGGCTTCCGCCAAGCCGGCTCCGGCCATATCCCGCCATGAGAGCGCCACACAG AAGGAGTCTGTTCTTCCTCCTAAAGTGCCTAGCATTGTGCCGACTGCTGCACTGGCACCT GTCACTGTACCCTGCAGCAGCTTCGTCTCCCCTATGCATTCAGGAGATTCAGTTTCGGTT GACGAGACGATGTCGACGTGTGACTCAATGAAAAGCCCAGAATTTGAGTACATTGATAAT GGGGATTCCTCCTCAGTTCTAGGTTCCTTGCAGCGAAGAGCAAACGAAAACCTGCGTATC TCAGAGGATAGAGATGTCGAAGAAACTAAGTGGAAGAAGGATGCTCCTTCCCCAATGGAA ATCGACCAAATTTGTGATGTTGACAATAACTACGAGGATCCGCAGTTGTGTGCTACTCTT GCTTCTGATATCTACATGCACTTGCGCGAGGCTGAGACCAGGAAACGTCCATCAACTGAT TTTATGGAAACAATCCAAAAGGATGTAAACCCAAGCATGAGAGCGATCCTGATAGACTGG CTTGTGGAAGTCGCTGAAGAATATCGTCTTGTTCCTGATACATTATACCTGACAGTTAAC TACATTGATCGTTATCTTTCTGGCAATGAGATCAATCGTCAAAGACTGCAATTACTTGGA GTTGCTTGTATGCTTATTGCTGCAAAATACGAGGAGATATGTGCACCTCAAGTAGAAGAA TTCTGCTATATAACTGACAACACATACTTCAGAGATGAGGTTTTGGAAATGGAAGCTTCT GTCCTGAATTACCTGAAGTTTGAAGTGACTGCACCTACAGCAAAATGCTTTTTGAGGAGA TTTGTCCGTGTTGCACAAGTATCGGATGAGGATCCAGCATTGCATCTTGAGTTCCTAGCC AATTATGTTGCTGAGCTATCACTGCTGGAGTACAATCTACTTTCTTACCCTCCTTCACTA GTAGCGGCATCGGCTATTTTCTTGGCCAAATTCATACTGCAGCCAACAAAGCACCCTTGG AATTCCACCCTTGCTCACTACACACAATACAAGTCGTCAGAGTTAAGCGACTGTGTAAAG GCATTGCACCGCCTTTTTAGCGTTGGTCCCGGGAGTAACCTTCCTGCAATCAGGGAGAAG TATACCCAACATAAGTACAAATTTGTGGCGAAGAAGCCCTGCCCACCCTCAATACCGACC GAATTCTTTCGCGACGCAACATGCTGA

Peptide Sequence

PEP ID	Os01t0233500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:7389373:7393708:-1 gene:Os01g0233500 transcript:Os01t0233500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-A1-1 description:Cyclin. (Os01t0233500-01)
Sequence	MSSNLAASRRSSSSSSVAAAAAAKRPAVGEGGGGGGGKAAAGAAAAKKRVALSNISNVAA GGGAPGKAGNAKLNLAASAAPVKKGSLASGRNVGTNRASAVKSASAKPAPAISRHESATQ KESVLPPKVPSIVPTAALAPVTVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPEFEYIDN GDSSSVLGSLQRRANENLRISEDRDVEETKWKKDAPSPMEIDQICDVDNNYEDPQLCATL ASDIYMHLREAETRKRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVN YIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEAS VLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSL VAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREK YTQHKYKFVAKKPCPPSIPTEFFRDATC

Transcript Sequence

Transcript ID	Os01t0233500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7389373:7393708:-1 gene:Os01g0233500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-A1-1 description:Cyclin. (Os01t0233500-01)
Sequence	CCCAATCCCCCTGGCCTCTGTCGGGAAGAGCACCCAAACCCTCGCTTCCGCCCTCGCAAA CCCTAGCGCCCGGAGGAGGAGGAGGTGGGTTGCGGTGGTAGTTTGCCGTCCGCCGATGTC GAGCAACCTAGCAGCCTCCCGCCGCTCGTCGTCGTCGTCCTCGGTGGCGGCGGCGGCGGC GGCGAAGCGACCCGCGGTGGGGGAGGGAGGAGGAGGAGGAGGAGGGAAGGCGGCAGCGGG CGCCGCCGCGGCAAAGAAGCGCGTGGCGCTTAGCAACATCAGCAACGTCGCCGCTGGTGG TGGCGCCCCAGGGAAGGCCGGCAATGCGAAGTTGAATTTAGCTGCCTCAGCTGCACCAGT GAAGAAGGGATCTTTGGCCAGTGGCCGCAATGTGGGCACGAATCGGGCCTCGGCGGTGAA ATCGGCTTCCGCCAAGCCGGCTCCGGCCATATCCCGCCATGAGAGCGCCACACAGAAGGA GTCTGTTCTTCCTCCTAAAGTGCCTAGCATTGTGCCGACTGCTGCACTGGCACCTGTCAC TGTACCCTGCAGCAGCTTCGTCTCCCCTATGCATTCAGGAGATTCAGTTTCGGTTGACGA GACGATGTCGACGTGTGACTCAATGAAAAGCCCAGAATTTGAGTACATTGATAATGGGGA TTCCTCCTCAGTTCTAGGTTCCTTGCAGCGAAGAGCAAACGAAAACCTGCGTATCTCAGA GGATAGAGATGTCGAAGAAACTAAGTGGAAGAAGGATGCTCCTTCCCCAATGGAAATCGA CCAAATTTGTGATGTTGACAATAACTACGAGGATCCGCAGTTGTGTGCTACTCTTGCTTC TGATATCTACATGCACTTGCGCGAGGCTGAGACCAGGAAACGTCCATCAACTGATTTTAT GGAAACAATCCAAAAGGATGTAAACCCAAGCATGAGAGCGATCCTGATAGACTGGCTTGT GGAAGTCGCTGAAGAATATCGTCTTGTTCCTGATACATTATACCTGACAGTTAACTACAT TGATCGTTATCTTTCTGGCAATGAGATCAATCGTCAAAGACTGCAATTACTTGGAGTTGC TTGTATGCTTATTGCTGCAAAATACGAGGAGATATGTGCACCTCAAGTAGAAGAATTCTG CTATATAACTGACAACACATACTTCAGAGATGAGGTTTTGGAAATGGAAGCTTCTGTCCT GAATTACCTGAAGTTTGAAGTGACTGCACCTACAGCAAAATGCTTTTTGAGGAGATTTGT CCGTGTTGCACAAGTATCGGATGAGGATCCAGCATTGCATCTTGAGTTCCTAGCCAATTA TGTTGCTGAGCTATCACTGCTGGAGTACAATCTACTTTCTTACCCTCCTTCACTAGTAGC GGCATCGGCTATTTTCTTGGCCAAATTCATACTGCAGCCAACAAAGCACCCTTGGAATTC CACCCTTGCTCACTACACACAATACAAGTCGTCAGAGTTAAGCGACTGTGTAAAGGCATT GCACCGCCTTTTTAGCGTTGGTCCCGGGAGTAACCTTCCTGCAATCAGGGAGAAGTATAC CCAACATAAGTACAAATTTGTGGCGAAGAAGCCCTGCCCACCCTCAATACCGACCGAATT CTTTCGCGACGCAACATGCTGAACTAGAAAAATAAACCAAGGATTAGTTACAGTTGCTGA CTGAATTCTTCCTCCAGAGGCACCTATGCCAGGTTGTGCCGTAGACCGTTCAGATAACCT TGATGCAAGGCATGCTGCTTGCCCCCCCCCCCCCCCCCCTGGTTCTTTCAGGCGGTTTGG CTGAGTGTAGATAGATCGATGCTTCTGCTGTGTGTGGTAACTTTTATGGTACTGATGTGC TTTCTTCTATCTTCTTTTCCCTGTACCTAGATGATCCATGGTTTTCAGTACTTTGTACAT CGGAGTCCTGCAGCAAAGCTTTAAACATCTTGTTTGATATTAGCTGCCAACCTGGGCGTC TCCTAGGTTGATGTATGATAGAGTCTCTGTTCGTGTTGCTTTTGTGAAATTCTCAATAAG AGCACCACATTTTCAACAGTGCTCATTCTGAAT