Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0233000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7363663:7366111:-1 gene:Os01g0233000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:developmentally regulated plasma membrane polypeptide 1 description:DREPP plasma membrane polypeptide family protein. (Os01t0233000-01)
Sequence

ATGACAAGTGTCTGGAAGACCAAGGTTCTCACTGGACTCAACAAGCTCTTTGACAAGGAT
GGAAAGAAGGCTGCTGCTGCTGAGTTCTTGAAATCATTCAACAAGGAGGAGATTGGCAAG
GAGATTGATGACAAGAAGACAGAGCTAGAGCCCAAGGTTGTGGAGGTTGTTGAGTCATCT
CCTCCTGAGATTAAGGCTTTGTTGAAGGACAAAAAAACAGCCAGCAAAATCAAGAAGAAC
GGTCCTGCAGTCACTAAGTTCCTTGAGGAATTGGCTAAGATTGATTTCCCCGGAGCCAAG
CCGGTGAGCGACGCGGTGGCCAAGTCCGGCACGACGCCGCTCTCCCCGGCGATCGCCTTC
ATCCTGGAGAAGGTCGCGCCTTTCGTTCCCAAGGAGGAGCCCAAGCCCGAGCCGGAGGCG
GAGGCGGCGGCGGAGACCACCTCCCGGGAAGTCGCCGTGGAGGAGGAGAAGAAGGAGGAG
GAGGCGGCCCCCGCCGAGCCCGCCGCCGCCGCCGCGGAGGCGGCGGCGCCGTCGACGGAG
GTGGTGGAGGAGAAGAAGGAGGAGGAGAAGCCAGCGGAGGCGGCGGCGCCGGCGGCTGAG
CCGGAGAAGCAGTAG

Peptide Sequence

PEP ID

Os01t0233000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7363663:7366111:-1 gene:Os01g0233000 transcript:Os01t0233000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:developmentally regulated plasma membrane polypeptide 1 description:DREPP plasma membrane polypeptide family protein. (Os01t0233000-01)
Sequence

MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS
PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF
ILEKVAPFVPKEEPKPEPEAEAAAETTSREVAVEEEKKEEEAAPAEPAAAAAEAAAPSTE
VVEEKKEEEKPAEAAAPAAEPEKQ

Transcript Sequence

Transcript ID

Os01t0233000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7363663:7366111:-1 gene:Os01g0233000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:developmentally regulated plasma membrane polypeptide 1 description:DREPP plasma membrane polypeptide family protein. (Os01t0233000-01)
Sequence

GTACTACTCTGCCCATTGATAGGCTGCTGGTGATCACAAGCTACACAACACATCACACAA
GCAATAGGCATCTCTCTCTTCTTTCTCTTTCTCCTCCTTGCTTCATTTGGAGTACTAGAG
ATTAATTTCTTGAAGGAGAGAAATGACAAGTGTCTGGAAGACCAAGGTTCTCACTGGACT
CAACAAGCTCTTTGACAAGGATGGAAAGAAGGCTGCTGCTGCTGAGTTCTTGAAATCATT
CAACAAGGAGGAGATTGGCAAGGAGATTGATGACAAGAAGACAGAGCTAGAGCCCAAGGT
TGTGGAGGTTGTTGAGTCATCTCCTCCTGAGATTAAGGCTTTGTTGAAGGACAAAAAAAC
AGCCAGCAAAATCAAGAAGAACGGTCCTGCAGTCACTAAGTTCCTTGAGGAATTGGCTAA
GATTGATTTCCCCGGAGCCAAGCCGGTGAGCGACGCGGTGGCCAAGTCCGGCACGACGCC
GCTCTCCCCGGCGATCGCCTTCATCCTGGAGAAGGTCGCGCCTTTCGTTCCCAAGGAGGA
GCCCAAGCCCGAGCCGGAGGCGGAGGCGGCGGCGGAGACCACCTCCCGGGAAGTCGCCGT
GGAGGAGGAGAAGAAGGAGGAGGAGGCGGCCCCCGCCGAGCCCGCCGCCGCCGCCGCGGA
GGCGGCGGCGCCGTCGACGGAGGTGGTGGAGGAGAAGAAGGAGGAGGAGAAGCCAGCGGA
GGCGGCGGCGCCGGCGGCTGAGCCGGAGAAGCAGTAGTGATCACTCCAGAAGCAAGCAAA
GCTAAGCTAGCTTAGCTAAGCTTAGCTGATGGTAATTAAAATCAAGATTAAGGTTAATGT
GATCACACTACTCTCTCTCAGTCTCTGCACAAAAAGTAAGTAAAAATCAAGATACACACA
CTTGGCATGCAAGAACATTTGTTATTGAATTCTTTCACCCTTTGATCCTTTCATCTCTCT
CCTATATATATATATGGTCGCCTCATCGGTTGTAAATTAATTTATGTGGGGTTTCTTGTT
TTTTGGGGGTGATTAAACATGTGTAATTATATTCATATGTTTGTTGGTCATGATCATAAG
GAGCTTGTGTATATTATCCATATCTTTTTTTTTCTTTTGTTTACAAATTTTCGGCTTGAG
GTGTGATGAAGATAGACATATATATGCACCCTCTCCAATTGTAATACAAATTAATGGCTG
TGGATATATGTTCATATGGTACAGTTTGTTGTTGTTGATCC