Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0232700-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:7350206:7352096:1 gene:Os01g0232700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HDH description:Similar to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH). Splice isoform 2. (Os01t0232700-01);Similar to Histidinol dehydrogenase. (Os01t0232700-02)
Sequence	CAGGCCATTTCAGCCATGGCATGGGGAACAGTCTCATGCCCAAAGGTTGAAAAAATATTT GGACCTGGAAATCAGTATGTCACGGCTGCAAAAATGATTCTTCAGAACAGTGAAGCCATG GTTTCTATAGACATGCCTGCTGGCCCTTCAGAAGTATTAGTGATAGCGGATAAATATGCA AACCCAGTTCATGTTGCTGCTGATTTGTTATCTCAGGCGGAACATGGCCCAGACAGTCAG GTTGTTCTAGTTGTTGCGGGAGACGGTGTTGATTTGGGTGCTATTGAGGCAGAAGTTAGC AAGCAGTGCTCTGCTCTTCCTAGGGGAGAATTTGCTTCGAAAGCTCTTGGCCACAGTTTC ACTGTTTTTGCGAAAGACATGGTTGAGGCAATTTCATTCTCCAATATGTATGCCCCTGAG CATTTGATCATCAATGTAAAGGATGCTGAACAGTGGGAGGATCTTGTCGAGAATGCAGGG TCGGTCTTCTTGGGACAATGGACCCCGGAGAGCGTGGGCGACTATGCAAGCGGCACAAAC CATGTCCTTCCAACCTATGGTTACGCAAGGATGTATAGCGGCGTGTCACTGAACTCATTC CTCAAGTACATCACTGTCCAGTCCTTGTCAGAGGAAGGGTTGAGAAGTCTGGGTCCGCAT GTGGCAAAGATGGCTGAAGTCGAAGGACTAGAGGCTCACAGAAGAGCTGTTACCCTCAGA CTTCAGGACATCGAAGCCACTGTAACCGTGTAG

Peptide Sequence

PEP ID	Os01t0232700-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:7350206:7352096:1 gene:Os01g0232700 transcript:Os01t0232700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HDH description:Similar to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH). Splice isoform 2. (Os01t0232700-01);Similar to Histidinol dehydrogenase. (Os01t0232700-02)
Sequence	QAISAMAWGTVSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADKYA NPVHVAADLLSQAEHGPDSQVVLVVAGDGVDLGAIEAEVSKQCSALPRGEFASKALGHSF TVFAKDMVEAISFSNMYAPEHLIINVKDAEQWEDLVENAGSVFLGQWTPESVGDYASGTN HVLPTYGYARMYSGVSLNSFLKYITVQSLSEEGLRSLGPHVAKMAEVEGLEAHRRAVTLR LQDIEATVTV

Transcript Sequence

Transcript ID	Os01t0232700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7350206:7352096:1 gene:Os01g0232700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HDH description:Similar to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH). Splice isoform 2. (Os01t0232700-01);Similar to Histidinol dehydrogenase. (Os01t0232700-02)
Sequence	TCAGGCCATTTCAGCCATGGCATGGGGAACAGTCTCATGCCCAAAGGTTGAAAAAATATT TGGACCTGGAAATCAGTATGTCACGGCTGCAAAAATGATTCTTCAGAACAGTGAAGCCAT GGTTTCTATAGACATGCCTGCTGGCCCTTCAGAAGTATTAGTGATAGCGGATAAATATGC AAACCCAGTTCATGTTGCTGCTGATTTGTTATCTCAGGCGGAACATGGCCCAGACAGTCA GGTTGTTCTAGTTGTTGCGGGAGACGGTGTTGATTTGGGTGCTATTGAGGCAGAAGTTAG CAAGCAGTGCTCTGCTCTTCCTAGGGGAGAATTTGCTTCGAAAGCTCTTGGCCACAGTTT CACTGTTTTTGCGAAAGACATGGTTGAGGCAATTTCATTCTCCAATATGTATGCCCCTGA GCATTTGATCATCAATGTAAAGGATGCTGAACAGTGGGAGGATCTTGTCGAGAATGCAGG GTCGGTCTTCTTGGGACAATGGACCCCGGAGAGCGTGGGCGACTATGCAAGCGGCACAAA CCATGTCCTTCCAACCTATGGTTACGCAAGGATGTATAGCGGCGTGTCACTGAACTCATT CCTCAAGTACATCACTGTCCAGTCCTTGTCAGAGGAAGGGTTGAGAAGTCTGGGTCCGCA TGTGGCAAAGATGGCTGAAGTCGAAGGACTAGAGGCTCACAGAAGAGCTGTTACCCTCAG ACTTCAGGACATCGAAGCCACTGTAACCGTGTAGATTTGTTACCATGATTGTTCTAGGGG CCAACTTGGATGCAGAGAACAAGAATCTGTGAACACCCTAATGAGAAGGGATGGTCCAGC TGTTTCTCGAAATAAGGCTCATCCATTTTGATACATCTTTGAATATAAAGTTTGTTTGAT TGTGTTACACTTTCAAGTATTCAAGAGGACGAAATCTGTGAAGACTGTAAGGAAAAGGGA TATGATCCAGCTATTACTCGAAATAAGGCCCATCCATTTTGAATC