Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0229500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7173618:7175779:1 gene:Os01g0229500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioesterase superfamily domain containing protein. (Os01t0229500-01)
Sequence

ATGGGCGGCAGCGCTGCGGCGGCGCCGCCGGCCCCGGCGTGGATGGCCGCCGGTGCCCGG
AGGTGGCTGGAGGAAGCCGGCGTCGCCTTCGACGGCTCCGACCGCCGCGCCTTCAACGCG
CTGCCCCTCGCCGGCGCGCGCGTCTCCCTCGCCGAGGCCGGCCGCGCCGTCTGCTCGCTC
CGCGTGACCGCCGAGCTCACGGACGCGGAGGGGAACTGGCACCCGGGGGCGATCGCGGCG
GCGGCGGACGACGTGTGCGCAGCGGCGATCATGTCGGTGGAGGGCATCATCAAGGTCTCC
GTCCACTACGACATCTCCTACTTCTCGCCGGCCAAGCTCCATGAGGAAGTTGAGCTGGAC
GGCAGGGTGGTGGAGCAGAAAGGGAAGATGACGGCGGTGACGGTGGAGATCCGGAAGAAG
GATTCCGGCGAGCTGGTGGCGATCGGCCGGCAGTGGATGTCGACCACCAGGCCAAAGAAG
GATCAAGCTAGCAGCAAGCTGTGA

Peptide Sequence

PEP ID

Os01t0229500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7173618:7175779:1 gene:Os01g0229500 transcript:Os01t0229500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioesterase superfamily domain containing protein. (Os01t0229500-01)
Sequence

MGGSAAAAPPAPAWMAAGARRWLEEAGVAFDGSDRRAFNALPLAGARVSLAEAGRAVCSL
RVTAELTDAEGNWHPGAIAAAADDVCAAAIMSVEGIIKVSVHYDISYFSPAKLHEEVELD
GRVVEQKGKMTAVTVEIRKKDSGELVAIGRQWMSTTRPKKDQASSKL

Transcript Sequence

Transcript ID

Os01t0229500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7173618:7175779:1 gene:Os01g0229500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioesterase superfamily domain containing protein. (Os01t0229500-01)
Sequence

GAGCTAGTCAAACCCGTCCACCCGCCGCCCGCCGCACGCCGGCGAAAACCAGTCGCGCGC
CCGCATGGGCGGCAGCGCTGCGGCGGCGCCGCCGGCCCCGGCGTGGATGGCCGCCGGTGC
CCGGAGGTGGCTGGAGGAAGCCGGCGTCGCCTTCGACGGCTCCGACCGCCGCGCCTTCAA
CGCGCTGCCCCTCGCCGGCGCGCGCGTCTCCCTCGCCGAGGCCGGCCGCGCCGTCTGCTC
GCTCCGCGTGACCGCCGAGCTCACGGACGCGGAGGGGAACTGGCACCCGGGGGCGATCGC
GGCGGCGGCGGACGACGTGTGCGCAGCGGCGATCATGTCGGTGGAGGGCATCATCAAGGT
CTCCGTCCACTACGACATCTCCTACTTCTCGCCGGCCAAGCTCCATGAGGAAGTTGAGCT
GGACGGCAGGGTGGTGGAGCAGAAAGGGAAGATGACGGCGGTGACGGTGGAGATCCGGAA
GAAGGATTCCGGCGAGCTGGTGGCGATCGGCCGGCAGTGGATGTCGACCACCAGGCCAAA
GAAGGATCAAGCTAGCAGCAAGCTGTGACTCTGAACCAGGTATGCCTACCTAGCTCCCAA
TGGAGTTCTTCAGTTCATCTATTGCTCACCTTAGCAACCATCGAGGTGATTGTAACTTTT
GTGTGTTGCAAGAAAAATCTCTCTCATTTTTTGTATCCTGAAACATACTGAATTTTAACT
TAATTGAAAGGGTATAGAGAACTAGAGAGATCCATGTTGCC