Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0229300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:7157780:7164385:1 gene:Os01g0229300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CURVED CHIMERIC PALEA 1, DEFORMED FLORAL ORGAN1, DEFORMED FLORAL ORGAN 1, EMBRYONIC FLOWER1, EMBRYONIC FLOWER 1 description:EMBRYONIC FLOWER1 (EMF1)-like protein, Transcriptional regulator, Palea development, Regulation of floral organ identity (Os01t0229300-01)
Sequence	ATGGAGATTGTTGCAGTAGATCAGGAGGGAGCTCGTGTTGTTGGGACGAACTGTATGCTT GCTCGTGGTGGAACTGGTGCTGTAGCGCCAGTGTTGGAGCTGACAGCGACGCCTCGTCAG GATGCAGCCGCTGAAGCTGGTGTAGACGAACCGGCACAACACCAATGCGAGCATTTCTCC ATAAGAGGGTATGTTGCTCTTCTTCAGAAGAAGGATCCAAAATTCTGCTCTCTATCTCGG ATTTTCCATGACCAGAAAAAATGTGATGAACACAAAGCTAGTTCAAGCCCATTTTCTGTA GCAAAGTTTCGACGATGGGATTGCTCGAAGTGCTTGGATAAGTTGAAAACTTCAGATAAT GGAACAGCACCAAGAACTCTTCCCGCAAAGCAGAATGGCACAAGTGATGGTTGCTCCATC ACATTTGTTCGGAGCACTTTTGTGCCTGCTAGTGTTGGTTCCCAAAAAGTGTCTCCTAGC ACACAATCATCTCAAGGGAAGAATGCTGATAGATCAACTCTTCCAAAGAGTGTGCAAGAA GGCAATGACTCCAAATGCAATGCGCCTTCTGGCAAGAATGGAGCTGCTGAGGCCAATACT GATTCACCAATGAAAGATTTGCAAGGGCCAGCCCAAAATTATGATGTGGCAGCAAATGTC TCTGAGGACAACACTTCTGTTGATGTTGGGGCTTTACCTGAAGTTCCCCAGATTACATGG CACATAGAAGTAAATGGTGCAGATCAACCTCCATCCACTCCAAAACTTTCTGAAGTGGTC CTCAAAAGAAATGAAGATGAAAATGGAAAAACTGAAGAGACTCTTGTTGCTGAGCAGTGC AATTTGACCAAAGATCCTAACCCAATGTCTGGAAAGGAACGTGATCAGGTTGCTGAGCAG TGCAATTTGACCAAAGATCCGAAACCAGTGTCTGGGCAGAAATGTGAGCAGATCTGCAAT GAGCCATGTGAAGAAGTTGTTCTCAAAAGAAGCTCCAAATCTAAGAGGAAGACGGATAAG AAGTTGATGAAGAAGCAGCAGCACAGCAAGAAACGCACTGCCCAGGCTGATGTTTCAGAT GCAAAGCTTTGTCGGAGAAAGCCAAAAAAGGTGCGGCTTCTATCAGAAATTATAAATGCT AACCAGGTTGAGGATTCTAGAAGTGACGAAGTTCATCGTGAAAATGCCGCTGATCCCTGT GAGGATGATAGAAGTACCATCCCGGTCCCGATGGAAGTAAGCATGGATATTCCTGTTAGC AACCATACAGTGGGAGAAGATGGGTTAAAATCAAGTAAGAACAAGACAAAACGCAAATAC TCTGATGTTGTAGATGATGGATCATCACTTATGAACTGGCTGAATGGAAAAAAGAAAAGA ACTGGAAGTGTGCATCACACAGTTGCTCATCCAGCTGGGAATTTGAGCAACAAAAAAGTG ACACCCACTGCGAGTACTCAGCATGATGATGAGAATGATACTGAAAATGGTCTTGACACA AATATGCATAAGACAGATGTCTGTCAGCATGTATCAGAAATCTCCACACAGAGGTGCTCA TCAAAGGGGAAAACAGCGGGTTTGAGTAAGGGGAAAACACATTCAGCTGCTAGTACCAAA TATGGTGGTGAAAGCACCAGAAATGGTCAGAACATACATGTACTCAGCGCAGAAGATCAA TGCCAGATGGAAACCGAAAACTCTGTTCTGAGTCACTCGGCAAAGGTTTCTCCAGCTGAG CATGATATCCAAATTATGTCTGACCTTCATGAGCAGAGTCTACCCAAGAAGAAAAAGAAG CAAAAACTTGAAGTGACTCGTGAAAAACAGACCATGATAGATGACATCCCCATGGATATT GTTGAACTGCTAGCTAAAAACCAGCATGAGAGGCAGCTTATGACTGAGACTGATTGTTCT GACATCAACCGTATTCAATCCAAGACAACTGCTGATGATGATTGTGTAATAGTAGCTGCC AAGGATGGTTCAGATTATGCATCAAGTGTGTTTGACACTAATTCCCAACAGAAGTCCTTG GCATCCCAAAGTACACAGAAGGAGTTACAGGGTCATTTGGCATTGACCACACAAGAGTCT CCACATCCTCAGAACTTTCAGTCTACTCAGGAACAGCAGACACATTTGCGGATGGAAGAA ATGGTCACTATTGCTGCAAGCTCACCACTATTTTCACATCATGATGATCAGTATATTGCT GAAGCACCAACTGAACATTGGGGCCGTAAGGACGCAAAGAAGCTAACGTGGGAGCAATTT AAGGCCACTACAAGAAATTCTCCAGCAGCAACATGTGGTGCTCAATTTAGACCTGGTATC CAAGCAGTTGACTTGACTTCTACTCATGTCATGGGATCTTCCAGCAATTATGCATCTCGC CAACCAGTAATTGCGCCACTGGACCGCTATGCTGAAAGAGCGGTTAACCAGGTCCATGCA AGAAATTTTCCAAGCACAATAGCAACCATGGAAGCGAGTAAGTTATGTGATCGGAGAAAT GCTGGACAAGTAGTCTTGTATCCTAAAGAATCCATGCCTGCGACGCATCTTCTGAGAATG ATGGATCCATCAACATTAGCAAGCTTCCCCAACTATGGAACTTCTAGCAGGAACCAGATG GAGTCTCAACTTCATAATTCTCAGTATGCACATAATCAGTACAAAGGATCAACCAGCACA TCATATGGCAGTAACCTGAATGGAAAGATTCCATTGACATTCGAAGACTTATCACGGCAT CAGCTGCATGATCTGCACAGACCTTTACGCCCACATCCTAGAGTTGGTGTGCTTGGCTCC TTGCTGCAGAAGGAAATTGCAAACTGGTCGGAGAACTGTGGCACACAATCTGGTTATAAG TTAGGAGTGTCAACAGGAATAACATCGCATCAGATGAACAGAAAGGAACATTTTGAAGCC CTGAATTCTGGAATGTTTTCAGCAAAATGGAATGCATTGCAGTTGGGTTCTGTTAGCTCC AGTGCAGATTTTTTATCAGCGAGGAACAGCATAGCTCAATCTTGGACCAGAGGCAAGGGT AAAATGGTTCATCCCTTGGATCGGTTTGTGAGACAGGATATCTGTATAACTAACAAGAAC CCAGCTGATTTTACTACAATCAGTAACGATAACGAGTATATGGATTACCGCTGA

Peptide Sequence

PEP ID	Os01t0229300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:7157780:7164385:1 gene:Os01g0229300 transcript:Os01t0229300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CURVED CHIMERIC PALEA 1, DEFORMED FLORAL ORGAN1, DEFORMED FLORAL ORGAN 1, EMBRYONIC FLOWER1, EMBRYONIC FLOWER 1 description:EMBRYONIC FLOWER1 (EMF1)-like protein, Transcriptional regulator, Palea development, Regulation of floral organ identity (Os01t0229300-01)
Sequence	MEIVAVDQEGARVVGTNCMLARGGTGAVAPVLELTATPRQDAAAEAGVDEPAQHQCEHFS IRGYVALLQKKDPKFCSLSRIFHDQKKCDEHKASSSPFSVAKFRRWDCSKCLDKLKTSDN GTAPRTLPAKQNGTSDGCSITFVRSTFVPASVGSQKVSPSTQSSQGKNADRSTLPKSVQE GNDSKCNAPSGKNGAAEANTDSPMKDLQGPAQNYDVAANVSEDNTSVDVGALPEVPQITW HIEVNGADQPPSTPKLSEVVLKRNEDENGKTEETLVAEQCNLTKDPNPMSGKERDQVAEQ CNLTKDPKPVSGQKCEQICNEPCEEVVLKRSSKSKRKTDKKLMKKQQHSKKRTAQADVSD AKLCRRKPKKVRLLSEIINANQVEDSRSDEVHRENAADPCEDDRSTIPVPMEVSMDIPVS NHTVGEDGLKSSKNKTKRKYSDVVDDGSSLMNWLNGKKKRTGSVHHTVAHPAGNLSNKKV TPTASTQHDDENDTENGLDTNMHKTDVCQHVSEISTQRCSSKGKTAGLSKGKTHSAASTK YGGESTRNGQNIHVLSAEDQCQMETENSVLSHSAKVSPAEHDIQIMSDLHEQSLPKKKKK QKLEVTREKQTMIDDIPMDIVELLAKNQHERQLMTETDCSDINRIQSKTTADDDCVIVAA KDGSDYASSVFDTNSQQKSLASQSTQKELQGHLALTTQESPHPQNFQSTQEQQTHLRMEE MVTIAASSPLFSHHDDQYIAEAPTEHWGRKDAKKLTWEQFKATTRNSPAATCGAQFRPGI QAVDLTSTHVMGSSSNYASRQPVIAPLDRYAERAVNQVHARNFPSTIATMEASKLCDRRN AGQVVLYPKESMPATHLLRMMDPSTLASFPNYGTSSRNQMESQLHNSQYAHNQYKGSTST SYGSNLNGKIPLTFEDLSRHQLHDLHRPLRPHPRVGVLGSLLQKEIANWSENCGTQSGYK LGVSTGITSHQMNRKEHFEALNSGMFSAKWNALQLGSVSSSADFLSARNSIAQSWTRGKG KMVHPLDRFVRQDICITNKNPADFTTISNDNEYMDYR

Transcript Sequence

Transcript ID	Os01t0229300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7157780:7164385:1 gene:Os01g0229300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CURVED CHIMERIC PALEA 1, DEFORMED FLORAL ORGAN1, DEFORMED FLORAL ORGAN 1, EMBRYONIC FLOWER1, EMBRYONIC FLOWER 1 description:EMBRYONIC FLOWER1 (EMF1)-like protein, Transcriptional regulator, Palea development, Regulation of floral organ identity (Os01t0229300-01)
Sequence	ACTCCAAATCCCTTCTTACCCTATTCCCCTCCCCCCGCAGCTTCTCTTCCTCCTGCAGTA CTCGCCGCCACCACCACCGCGCCGCCGCCGCCGGCCGCGTTCCGAGACCCACTCGATCGG AATCCACCGCGGCGCGCCCGCGCGCCTGCGTCCTCTTCCTTCCCCGGGAGCCGACCGACC ACGGCGACCAGTCGATCTCCCTCTCCGGGCGCCAACCGCGTCTTAGCTTCATCGAATCCA CCGCCCCACCCCGCATCTCCTCCTCCTCCTCCGACGACGACGACTACTACTAGTCTTCTC CAATAAGCCCCCCTCCCGCTCCCCCCGCCTGAAGAAGAAGCAGCAGCTAGCTCCGGGGAG AGGTCGACGGCGCGCCGGGTAGATCGCGCCCCGCCCCGCCTGCGTCGCGGCTGTCGGAGC AAACGCAAACCCCCCAGGTTGTTCTAGCGTGTGCAGCGGCTAGCTGATTGATTGTCTTCT GTGATATATCCAGAGCTCGTGTTTTGTGGTTTGTGGTTTGTGGTTTGTGCTTGGATTGTT GATGTGCTAATTCGCGGCGTTACAAGATCACTGCTGGATTGATATTGAGTTGTGCCTCGG CTGTGCTAGCTGTGTGTTGATTCTCTCCTCGTCGTGGTGATCGATATGGAGATTGTTGCA GTAGATCAGGAGGGAGCTCGTGTTGTTGGGACGAACTGTATGCTTGCTCGTGGTGGAACT GGTGCTGTAGCGCCAGTGTTGGAGCTGACAGCGACGCCTCGTCAGGATGCAGCCGCTGAA GCTGGTGTAGACGAACCGGCACAACACCAATGCGAGCATTTCTCCATAAGAGGGTATGTT GCTCTTCTTCAGAAGAAGGATCCAAAATTCTGCTCTCTATCTCGGATTTTCCATGACCAG AAAAAATGTGATGAACACAAAGCTAGTTCAAGCCCATTTTCTGTAGCAAAGTTTCGACGA TGGGATTGCTCGAAGTGCTTGGATAAGTTGAAAACTTCAGATAATGGAACAGCACCAAGA ACTCTTCCCGCAAAGCAGAATGGCACAAGTGATGGTTGCTCCATCACATTTGTTCGGAGC ACTTTTGTGCCTGCTAGTGTTGGTTCCCAAAAAGTGTCTCCTAGCACACAATCATCTCAA GGGAAGAATGCTGATAGATCAACTCTTCCAAAGAGTGTGCAAGAAGGCAATGACTCCAAA TGCAATGCGCCTTCTGGCAAGAATGGAGCTGCTGAGGCCAATACTGATTCACCAATGAAA GATTTGCAAGGGCCAGCCCAAAATTATGATGTGGCAGCAAATGTCTCTGAGGACAACACT TCTGTTGATGTTGGGGCTTTACCTGAAGTTCCCCAGATTACATGGCACATAGAAGTAAAT GGTGCAGATCAACCTCCATCCACTCCAAAACTTTCTGAAGTGGTCCTCAAAAGAAATGAA GATGAAAATGGAAAAACTGAAGAGACTCTTGTTGCTGAGCAGTGCAATTTGACCAAAGAT CCTAACCCAATGTCTGGAAAGGAACGTGATCAGGTTGCTGAGCAGTGCAATTTGACCAAA GATCCGAAACCAGTGTCTGGGCAGAAATGTGAGCAGATCTGCAATGAGCCATGTGAAGAA GTTGTTCTCAAAAGAAGCTCCAAATCTAAGAGGAAGACGGATAAGAAGTTGATGAAGAAG CAGCAGCACAGCAAGAAACGCACTGCCCAGGCTGATGTTTCAGATGCAAAGCTTTGTCGG AGAAAGCCAAAAAAGGTGCGGCTTCTATCAGAAATTATAAATGCTAACCAGGTTGAGGAT TCTAGAAGTGACGAAGTTCATCGTGAAAATGCCGCTGATCCCTGTGAGGATGATAGAAGT ACCATCCCGGTCCCGATGGAAGTAAGCATGGATATTCCTGTTAGCAACCATACAGTGGGA GAAGATGGGTTAAAATCAAGTAAGAACAAGACAAAACGCAAATACTCTGATGTTGTAGAT GATGGATCATCACTTATGAACTGGCTGAATGGAAAAAAGAAAAGAACTGGAAGTGTGCAT CACACAGTTGCTCATCCAGCTGGGAATTTGAGCAACAAAAAAGTGACACCCACTGCGAGT ACTCAGCATGATGATGAGAATGATACTGAAAATGGTCTTGACACAAATATGCATAAGACA GATGTCTGTCAGCATGTATCAGAAATCTCCACACAGAGGTGCTCATCAAAGGGGAAAACA GCGGGTTTGAGTAAGGGGAAAACACATTCAGCTGCTAGTACCAAATATGGTGGTGAAAGC ACCAGAAATGGTCAGAACATACATGTACTCAGCGCAGAAGATCAATGCCAGATGGAAACC GAAAACTCTGTTCTGAGTCACTCGGCAAAGGTTTCTCCAGCTGAGCATGATATCCAAATT ATGTCTGACCTTCATGAGCAGAGTCTACCCAAGAAGAAAAAGAAGCAAAAACTTGAAGTG ACTCGTGAAAAACAGACCATGATAGATGACATCCCCATGGATATTGTTGAACTGCTAGCT AAAAACCAGCATGAGAGGCAGCTTATGACTGAGACTGATTGTTCTGACATCAACCGTATT CAATCCAAGACAACTGCTGATGATGATTGTGTAATAGTAGCTGCCAAGGATGGTTCAGAT TATGCATCAAGTGTGTTTGACACTAATTCCCAACAGAAGTCCTTGGCATCCCAAAGTACA CAGAAGGAGTTACAGGGTCATTTGGCATTGACCACACAAGAGTCTCCACATCCTCAGAAC TTTCAGTCTACTCAGGAACAGCAGACACATTTGCGGATGGAAGAAATGGTCACTATTGCT GCAAGCTCACCACTATTTTCACATCATGATGATCAGTATATTGCTGAAGCACCAACTGAA CATTGGGGCCGTAAGGACGCAAAGAAGCTAACGTGGGAGCAATTTAAGGCCACTACAAGA AATTCTCCAGCAGCAACATGTGGTGCTCAATTTAGACCTGGTATCCAAGCAGTTGACTTG ACTTCTACTCATGTCATGGGATCTTCCAGCAATTATGCATCTCGCCAACCAGTAATTGCG CCACTGGACCGCTATGCTGAAAGAGCGGTTAACCAGGTCCATGCAAGAAATTTTCCAAGC ACAATAGCAACCATGGAAGCGAGTAAGTTATGTGATCGGAGAAATGCTGGACAAGTAGTC TTGTATCCTAAAGAATCCATGCCTGCGACGCATCTTCTGAGAATGATGGATCCATCAACA TTAGCAAGCTTCCCCAACTATGGAACTTCTAGCAGGAACCAGATGGAGTCTCAACTTCAT AATTCTCAGTATGCACATAATCAGTACAAAGGATCAACCAGCACATCATATGGCAGTAAC CTGAATGGAAAGATTCCATTGACATTCGAAGACTTATCACGGCATCAGCTGCATGATCTG CACAGACCTTTACGCCCACATCCTAGAGTTGGTGTGCTTGGCTCCTTGCTGCAGAAGGAA ATTGCAAACTGGTCGGAGAACTGTGGCACACAATCTGGTTATAAGTTAGGAGTGTCAACA GGAATAACATCGCATCAGATGAACAGAAAGGAACATTTTGAAGCCCTGAATTCTGGAATG TTTTCAGCAAAATGGAATGCATTGCAGTTGGGTTCTGTTAGCTCCAGTGCAGATTTTTTA TCAGCGAGGAACAGCATAGCTCAATCTTGGACCAGAGGCAAGGGTAAAATGGTTCATCCC TTGGATCGGTTTGTGAGACAGGATATCTGTATAACTAACAAGAACCCAGCTGATTTTACT ACAATCAGTAACGATAACGAGTATATGGATTACCGCTGAAGCAGAAAGTGGTGTGCATAA TTCCTGAACATTTACAATCATACATTTCATCTTTATGGCGCCAAATAGTCATACTGTAAG AGGAGGGCTTTGCTGGATCTGCTGTAAGGCTTCTTGTAAGTTGTGGATGCCCCATTTTCT GGATGGGAACCTGCCAGACAGTGAACAAGGGCTTTGCAAGGTGCAGCATCCGGTTTTTGT TTTGCCAGTCCAAGAAACGTCCTCCTGTTACTTTGTAGTTGTACTCATACTAGTGCGCTT GTTTGTACAAGGAGAAATGTGTAACCTTGTTGAAAAAATGTCTCCCCCATTTTGTAATTA CCATAAGGAGGTTTATAGTGTTGTGAGCTGTGTGTGACTGACGGCGAGAAATGGTTTTGT CGGTGTTAAGGTTGAAACGACTAGCTCTCGTTATCAATGTGTTGTAAACTTCTAGATTGA TGTGTTACCTTACTCTTGAAGTCAACACCGGAGAATTTAC