Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0229100-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:7125406:7128890:-1 gene:Os01g0229100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Eukaryotic translation initiation factor 3 subunit 6-interacting protein. (Os01t0229100-01);Protein-tyrosine phosphatase, active site domain containing protein. (Os01t0229100-02)
Sequence	ATGGCGGCGGCGGCGGCGGAGGGTGGCGGCGGCGGAGGTGGGGCGGTGTACGACCCGAGC TACGTGCCGGACTCGGTGAAGACGTTCGTGGCGCACATGTACAGGCACGTCAGGGACAAG AACGTGTACGAGATCCACCAGATGTACGAGGGCGGGTTCCAGCGGCTCTCCGACCGCCTC TTCCGCGACGCGCCGTGGCCGGCGGCGGAGGCCGTCTCGCCCTACTGCGACGGCGACCAC GTCTTCCTCCTCCTCTACCGGGAGCTCTGGTACCGCCACGCCTACGCGCGGGCCTCCTCG TCGTCGTCGTCGTCCGCGCCGCTCACCGCCGGCCAGCGCGCCGAGTCGTGGGCGAACTAC TGCGACCTCTTCAGCGTCGTCCTCCACGGCGTCGTCAACATGCAGCTCCCCAACCAGTGG CTCTGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGAGCTTCTGCCAGTACCGCGCC AAGCTCAAGAACAAGTCCGACGACGAGCTCCACCAGCTCAAGCAGTTCGACAAGGCGTGG AATGTGTACGGGGTTCTCAATTACCTGCAAGCGCTGGTGGAGAAGTCCATGATCGCGCAG ATTCTGGAGAGGGAGAAGGAAGGGCTCGAGCAGTTCACTGCCACCGACGGCTACGACTAC CAGGGTGGCAGCAATGTGCTCAAGATGCTCGGTTATTACAGCATGATTGGGCTGCTCAGG ATACACTGCCTCCTTGGGGATTACCGCACTGGCCTCAAGTGCTTGGCACCAATCGACCTT AACCAGCAGGGGGTCTACACCATTGTGATTGGGAGTCACATCTCTGCTATCTACCACTAT GGCTTTGCAAATCTTATGATGCGCAGATATGCTGAAGCCATACGTGAATTCAACAAAATC TTGCTGTACATTCTGAAATATAAGCAGTACCATCAGAAGTCCCCGCAGTATGACCAGATC TTGAAGAAAAATGAACAGATGTATGCCTTCTTGGCAGTTTGCCTTTCCTTATGCCCGCAG CACAACCTCATTGATGAGAATGTTAGCACCCAGCTGAAAGAAAAGTATAATGACAAAATG ACAAAGATGCAGAGGTTTGATGAGGAAACCTATGCTGCGTATGATGAACTGTTTTCATAC GCATGCCCCAAGTTTATTACTCCATCACCTCCAGCCCTGGATCAGCCACTTACAAATTAT AACCAGGATGCATACCGCCTTCAATTGAAGTTGTTCCTTTATGAAGTGAAGCAACAACAG TTGCTTTCAGGGATCAGAAGCTATCTAAAATTGTATTCAACAATAACTATTGCCAAACTT GCGCAATATATGGAAGTGGATGAGGCAACGCTTAGGTCTATCCTGATGACGTACAAGCAC AAAATGCATGCAGTTGACAATAATGGAAAGATTGTTTCCAGCGCAGACTTTGATTTCTAC ATTAAGGAGGATGTTATTCATGTCATGGAGTCCAAACCAATCAAGCGCCATGGTGATTAC TTTTTGAGACAGATTTTAAAGTTTGAGGAAATGATTGGTGAACTGGAGAAAGTACAGTTT GACTGA

Peptide Sequence

PEP ID	Os01t0229100-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:7125406:7128890:-1 gene:Os01g0229100 transcript:Os01t0229100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Eukaryotic translation initiation factor 3 subunit 6-interacting protein. (Os01t0229100-01);Protein-tyrosine phosphatase, active site domain containing protein. (Os01t0229100-02)
Sequence	MAAAAAEGGGGGGGAVYDPSYVPDSVKTFVAHMYRHVRDKNVYEIHQMYEGGFQRLSDRL FRDAPWPAAEAVSPYCDGDHVFLLLYRELWYRHAYARASSSSSSSAPLTAGQRAESWANY CDLFSVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKLKNKSDDELHQLKQFDKAW NVYGVLNYLQALVEKSMIAQILEREKEGLEQFTATDGYDYQGGSNVLKMLGYYSMIGLLR IHCLLGDYRTGLKCLAPIDLNQQGVYTIVIGSHISAIYHYGFANLMMRRYAEAIREFNKI LLYILKYKQYHQKSPQYDQILKKNEQMYAFLAVCLSLCPQHNLIDENVSTQLKEKYNDKM TKMQRFDEETYAAYDELFSYACPKFITPSPPALDQPLTNYNQDAYRLQLKLFLYEVKQQQ LLSGIRSYLKLYSTITIAKLAQYMEVDEATLRSILMTYKHKMHAVDNNGKIVSSADFDFY IKEDVIHVMESKPIKRHGDYFLRQILKFEEMIGELEKVQFD

Transcript Sequence

Transcript ID	Os01t0229100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7125406:7128890:-1 gene:Os01g0229100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Eukaryotic translation initiation factor 3 subunit 6-interacting protein. (Os01t0229100-01);Protein-tyrosine phosphatase, active site domain containing protein. (Os01t0229100-02)
Sequence	ACGCGCCGCCGGAAGCGCGAAACCCTAGCAATGGCGGCGGCGGCGGCGGAGGGTGGCGGC GGCGGAGGTGGGGCGGTGTACGACCCGAGCTACGTGCCGGACTCGGTGAAGACGTTCGTG GCGCACATGTACAGGCACGTCAGGGACAAGAACGTGTACGAGATCCACCAGATGTACGAG GGCGGGTTCCAGCGGCTCTCCGACCGCCTCTTCCGCGACGCGCCGTGGCCGGCGGCGGAG GCCGTCTCGCCCTACTGCGACGGCGACCACGTCTTCCTCCTCCTCTACCGGGAGCTCTGG TACCGCCACGCCTACGCGCGGGCCTCCTCGTCGTCGTCGTCGTCCGCGCCGCTCACCGCC GGCCAGCGCGCCGAGTCGTGGGCGAACTACTGCGACCTCTTCAGCGTCGTCCTCCACGGC GTCGTCAACATGCAGCTCCCCAACCAGTGGCTCTGGGACATGGTCGACGAGTTCGTCTAC CAGTTCCAGAGCTTCTGCCAGTACCGCGCCAAGCTCAAGAACAAGTCCGACGACGAGCTC CACCAGCTCAAGCAGTTCGACAAGGCGTGGAATGTGTACGGGGTTCTCAATTACCTGCAA GCGCTGGTGGAGAAGTCCATGATCGCGCAGATTCTGGAGAGGGAGAAGGAAGGGCTCGAG CAGTTCACTGCCACCGACGGCTACGACTACCAGGGTGGCAGCAATGTGCTCAAGATGCTC GGTTATTACAGCATGATTGGGCTGCTCAGGATACACTGCCTCCTTGGGGATTACCGCACT GGCCTCAAGTGCTTGGCACCAATCGACCTTAACCAGCAGGGGGTCTACACCATTGTGATT GGGAGTCACATCTCTGCTATCTACCACTATGGCTTTGCAAATCTTATGATGCGCAGATAT GCTGAAGCCATACGTGAATTCAACAAAATCTTGCTGTACATTCTGAAATATAAGCAGTAC CATCAGAAGTCCCCGCAGTATGACCAGATCTTGAAGAAAAATGAACAGATGTATGCCTTC TTGGCAGTTTGCCTTTCCTTATGCCCGCAGCACAACCTCATTGATGAGAATGTTAGCACC CAGCTGAAAGAAAAGTATAATGACAAAATGACAAAGATGCAGAGGTTTGATGAGGAAACC TATGCTGCGTATGATGAACTGTTTTCATACGCATGCCCCAAGTTTATTACTCCATCACCT CCAGCCCTGGATCAGCCACTTACAAATTATAACCAGGATGCATACCGCCTTCAATTGAAG TTGTTCCTTTATGAAGTGAAGCAACAACAGTTGCTTTCAGGGATCAGAAGCTATCTAAAA TTGTATTCAACAATAACTATTGCCAAACTTGCGCAATATATGGAAGTGGATGAGGCAACG CTTAGGTCTATCCTGATGACGTACAAGCACAAAATGCATGCAGTTGACAATAATGGAAAG ATTGTTTCCAGCGCAGACTTTGATTTCTACATTAAGGAGGATGTTATTCATGTCATGGAG TCCAAACCAATCAAGCGCCATGGTGATTACTTTTTGAGACAGATTTTAAAGTTTGAGGAA ATGATTGGTGAACTGGAGAAAGTACAGTTTGACTGAGCCTGGTAGGAATCATGGAGGAGC GGGGTACATCCCCACTTAGTTTAGCTGTTGCAAGAGGCACTCATGATAGTTATTGTGTAC TTATTAATATATGTGCCTTTTGTACTCCTTTTTGACTTCAGAGATGAACCGGTAAATTCT TTTTGAAAATTGTAGGAACTTCAGAGTCTGAAGTTTGAATTCTCACTACTGTGCCATCAT GGCGTTTTCTGTGATGATTCTATACAGTAGTTGAGCTATTATCTCTTCTAGCTGTTCGAT ATAGTCCTTGTGATCC