Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0228400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:7092034:7095315:1 gene:Os01g0228400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0228400-01)
Sequence	ATGGTAGAGAACGGTGTGCAGCTCACATTGACCTCCACTGTCAAGACCAATGGCAAGATA AGAATCAATGGAGAAGTGCTAAACGGATCACACCTCAAAGAGAAGCACGAAGCTGGCAGC AATGGCGCCCTGCACCCATCAAACGGGCAAGCAAAGCAGCCGCCGTCGCCGCCGCAGAAG CAGAAGCAGAAGCTGCTCTGCACGACGTGCGGCAAGGGGCACACGTGCCAGGCGGTGATC GCCCGGACGCGGCAGATGCGCGCCATGATCGACGCGAGGAGGCCGCACCAGGCGCACTCG GCGTTCCGCCACCTCGTCGACGACGGCCACCGCCCGTCGCTGGTGACGTACACCACGCTG CTCGCGGCGCTGACGAGCCAGCGGGCGTTCGACACCATCCCGTGGCTGCTCGCCGAGGTG GAGGACGCCGGCCTCCGCCCGGACTCCATCTTCTTCAACGCGCTCATCAACGCCCTCGTC GAGGCCCGGCGGATGGGCGAGGCGACGAACACCTTCCTCAGGATGGGCCACTCCGGCTGC CGCCCCACGGCGAGCACGTTCAACACGCTGATCAAGGGCTACGGCATAGCCGGCCGCCCC GAGGAGTCGCAGCGGGTGTTCGACATGATGGCCTCCGGCGGCGCCGGCGGCGAGGCGGCG GTCAGGCCGAACCTGACGACGTACAACATCCTCGTCAAGGCGTGGTGCGACGCCGGGAGG CTGGAGGAGGCGTGGCGGGTGGTGGCGAGGATGCGCGCGTCGGGCGCCGACCCGGACGTC GTCACGTACAACACCCTCGCCAGCGCGTACGCCAAGAACGACGAGACGTGGCGCGCCGAG GAGCTCGTCGTGGAGATGGCGCAGCAGGCAGGGCTCCGCACCAGCGAGCGCACCTGGGGC ATCATCGTCGGCGGCTACTGCCGCGAGGGCCGCCTCGGCGAGGCGCTCCGCTGCGTCCGC CAGATGAAGGACTCCGGCGTGCTCCCCAACGTCATCGTCTTCAACACCCTGCTCAAGGGC TTCCTCGACGCCAACGACATGGCCGCCGTCGACGACGTTCTTGGGCTGATGGAGCAGTTC GGGATCAAGCCGGACATCGTGACCTACAGCCACCAGCTGAACGCGCTGAGCTCCATGGGG CACATGGCCAAGTGCATGAAGGTGTTCGACAAAATGATCGAGGCCGGGATCGAGCCGGAC CCGCAGGTGTACAGCATCCTCGCCAAGGGCTACGTGCGCGCGCAGCAGCCGGAGAAGGCG GAGGAGCTCCTGCGCCAGATGGGCCGCCTCGGCGTCCGCCCCAACGTCGTCACCTTCACC ACCGTCATCAGCGGGTGGTGCAGCGTCGCCGACATGGGCAACGCCGTGAGGGTCTACGCC GCCATGCGCGACGCCGGCGTGCGCCCGAACCTCAGGACGTTCGAGACCCTCATCTGGGGC TACAGCGAGCTGAAGCAGCCATGGAAGGCCGAGGAGGTGCTCCAGATGATGCAGGACGCC GGCGTCCGCCCCAAGCAGACCACCTACTGCCTCGTCGCCGACGCGTGGAAGGCCGTCGGC CTCGTCGAGAACGCCAACCGCGCGCTCGGCTCCTCCTCCTCCTCCGGCGACCTCCTCGAC GCCGACGACGACGAGGAGCCCTACTTCCCGGACAACCATGGCGACGACAAGCTGCAGAGC TTCGAGAGAACCAATGGCCATGCCAAGAGTGACGCGTCACGATCCATGCAGGTGACAAGA GCTTCCATGAGCTTGAAGACGGCGAGGTCGTCGTCGCCGTCGCTGTCGCTGCTCCGGCGA TCGTGCCGGCTTCCGGTGAGATCCACGTGGCTTTGCAGGAAGCAGCTTCAGATGCAGTGT GGAGTGTATGGCCAGAGCATCAGCTCACTGAAGATGGTGTTCCTCAGTTAG

Peptide Sequence

PEP ID	Os01t0228400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:7092034:7095315:1 gene:Os01g0228400 transcript:Os01t0228400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0228400-01)
Sequence	MVENGVQLTLTSTVKTNGKIRINGEVLNGSHLKEKHEAGSNGALHPSNGQAKQPPSPPQK QKQKLLCTTCGKGHTCQAVIARTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTL LAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGC RPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGR LEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWG IIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQF GIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKA EELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWG YSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAWKAVGLVENANRALGSSSSSGDLLD ADDDEEPYFPDNHGDDKLQSFERTNGHAKSDASRSMQVTRASMSLKTARSSSPSLSLLRR SCRLPVRSTWLCRKQLQMQCGVYGQSISSLKMVFLS

Transcript Sequence

Transcript ID	Os01t0228400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:7092034:7095315:1 gene:Os01g0228400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0228400-01)
Sequence	AAAAAGCTCCACCGGGGGCAAAAAAAAAAAAAAAAAAAAGCGGACGCCGCCTGCGCCTCG TGTTCCTCCACGTCGCTCCGCCGCTCCGCCCGCCTTGCTTGCGAGCCACAGCGACGGCTG GCCACGCGCGGCGTGTGCGTGCGTAGAGCGCGGGGGGGACGGAGGCACACGCTGGCCACC AGCTGCAGCTGCAGCGCAGCTCGCTCTCCTTGGCCAATGAACGCTCGTTGCTGCCAGTAG CTCGTTGATTCTCAGGTTAAGGAGCTGGCTGACAGAAGCATAGTACCATGGTAGAGAACG GTGTGCAGCTCACATTGACCTCCACTGTCAAGACCAATGGCAAGATAAGAATCAATGGAG AAGTGCTAAACGGATCACACCTCAAAGAGAAGCACGAAGCTGGCAGCAATGGCGCCCTGC ACCCATCAAACGGGCAAGCAAAGCAGCCGCCGTCGCCGCCGCAGAAGCAGAAGCAGAAGC TGCTCTGCACGACGTGCGGCAAGGGGCACACGTGCCAGGCGGTGATCGCCCGGACGCGGC AGATGCGCGCCATGATCGACGCGAGGAGGCCGCACCAGGCGCACTCGGCGTTCCGCCACC TCGTCGACGACGGCCACCGCCCGTCGCTGGTGACGTACACCACGCTGCTCGCGGCGCTGA CGAGCCAGCGGGCGTTCGACACCATCCCGTGGCTGCTCGCCGAGGTGGAGGACGCCGGCC TCCGCCCGGACTCCATCTTCTTCAACGCGCTCATCAACGCCCTCGTCGAGGCCCGGCGGA TGGGCGAGGCGACGAACACCTTCCTCAGGATGGGCCACTCCGGCTGCCGCCCCACGGCGA GCACGTTCAACACGCTGATCAAGGGCTACGGCATAGCCGGCCGCCCCGAGGAGTCGCAGC GGGTGTTCGACATGATGGCCTCCGGCGGCGCCGGCGGCGAGGCGGCGGTCAGGCCGAACC TGACGACGTACAACATCCTCGTCAAGGCGTGGTGCGACGCCGGGAGGCTGGAGGAGGCGT GGCGGGTGGTGGCGAGGATGCGCGCGTCGGGCGCCGACCCGGACGTCGTCACGTACAACA CCCTCGCCAGCGCGTACGCCAAGAACGACGAGACGTGGCGCGCCGAGGAGCTCGTCGTGG AGATGGCGCAGCAGGCAGGGCTCCGCACCAGCGAGCGCACCTGGGGCATCATCGTCGGCG GCTACTGCCGCGAGGGCCGCCTCGGCGAGGCGCTCCGCTGCGTCCGCCAGATGAAGGACT CCGGCGTGCTCCCCAACGTCATCGTCTTCAACACCCTGCTCAAGGGCTTCCTCGACGCCA ACGACATGGCCGCCGTCGACGACGTTCTTGGGCTGATGGAGCAGTTCGGGATCAAGCCGG ACATCGTGACCTACAGCCACCAGCTGAACGCGCTGAGCTCCATGGGGCACATGGCCAAGT GCATGAAGGTGTTCGACAAAATGATCGAGGCCGGGATCGAGCCGGACCCGCAGGTGTACA GCATCCTCGCCAAGGGCTACGTGCGCGCGCAGCAGCCGGAGAAGGCGGAGGAGCTCCTGC GCCAGATGGGCCGCCTCGGCGTCCGCCCCAACGTCGTCACCTTCACCACCGTCATCAGCG GGTGGTGCAGCGTCGCCGACATGGGCAACGCCGTGAGGGTCTACGCCGCCATGCGCGACG CCGGCGTGCGCCCGAACCTCAGGACGTTCGAGACCCTCATCTGGGGCTACAGCGAGCTGA AGCAGCCATGGAAGGCCGAGGAGGTGCTCCAGATGATGCAGGACGCCGGCGTCCGCCCCA AGCAGACCACCTACTGCCTCGTCGCCGACGCGTGGAAGGCCGTCGGCCTCGTCGAGAACG CCAACCGCGCGCTCGGCTCCTCCTCCTCCTCCGGCGACCTCCTCGACGCCGACGACGACG AGGAGCCCTACTTCCCGGACAACCATGGCGACGACAAGCTGCAGAGCTTCGAGAGAACCA ATGGCCATGCCAAGAGTGACGCGTCACGATCCATGCAGGTGACAAGAGCTTCCATGAGCT TGAAGACGGCGAGGTCGTCGTCGCCGTCGCTGTCGCTGCTCCGGCGATCGTGCCGGCTTC CGGTGAGATCCACGTGGCTTTGCAGGAAGCAGCTTCAGATGCAGTGTGGAGTGTATGGCC AGAGCATCAGCTCACTGAAGATGGTGTTCCTCAGTTAGAGGAGGCCATCTTGTGTTGTTG CTCAGTAAAAAAGAAAAATGTACACTGGCAAGAACCTGTCAATTACAATTCTTACTATTT CTCAACACACATTGGATGATTTCTGCTGTGCCAAGAACTCGCTTCAGATGTCTCAAAAAT TTTGGAAGGAAGACTGGGAAATATGTTTATGTAAGATAGCAAATGTATGTTGATCATGGA CAGCTTGTTTTCCAAAACACTGATGATATATGGTATGTCTAGTTCAATG