Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0228300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:7085873:7089172:-1 gene:Os01g0228300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mpv17/PMP22 family protein. (Os01t0228300-01)
Sequence

ATGCGGCGGCTATGGCGGTGGTACCAGCAGTGCCTGGCCACCCACCCCGTGCGCACGCAG
GTGGTCAGCTCCGGCATCCTCTGGGGCCTCGGCGACATCGGCGCCCAGGCCGTCACCCAC
TACTCCGCCCCCGGACGCCCCCGCCACCACCAGCACCACGCCAAGAATCCTCCCGAGGAT
AAAGATAAAGAGTTCAAAATTGATTGGAAGAGGGTGGGCATCACAAGCTCATTTGGATTT
GCTTTTGTTGGACCAGTTGGACATTACTGGTATGAATACTTGGATCGCTTCATCCTGAGG
AGATACCAGCCTAAGACCTTCAAATTTGTTGCGTCAAAAGTTGCTGCGGATGGTCTCCTA
TTTGGACCAGTAGATCTTCTCTTGTTCTTCTCATATGTTGGTCTTGCATCAGGAAGGAGT
GTAGAGCAGGTGAAGGATGATGTGAAGAGGGACTTCATTCCTGCTCTAGTTCTAGGGGGA
ACCATCTGGCCAGCCGTGCAAATCGCAAATTTCCGCTTCATTCCTGTGCGATATCAGCTC
CTTTACGTGAACCTGTTCTGCCTCTTAGACAGTTGCTTCTTGTCGTGGATCGATCAACAA
GGAGATGCACCTTGGAAGCAATGGTTCACATCATTCCAGAAAATCGAAGGCCAGAAGGGC
AAGGTTTGA

Peptide Sequence

PEP ID

Os01t0228300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:7085873:7089172:-1 gene:Os01g0228300 transcript:Os01t0228300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mpv17/PMP22 family protein. (Os01t0228300-01)
Sequence

MRRLWRWYQQCLATHPVRTQVVSSGILWGLGDIGAQAVTHYSAPGRPRHHQHHAKNPPED
KDKEFKIDWKRVGITSSFGFAFVGPVGHYWYEYLDRFILRRYQPKTFKFVASKVAADGLL
FGPVDLLLFFSYVGLASGRSVEQVKDDVKRDFIPALVLGGTIWPAVQIANFRFIPVRYQL
LYVNLFCLLDSCFLSWIDQQGDAPWKQWFTSFQKIEGQKGKV

Transcript Sequence

Transcript ID

Os01t0228300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:7085873:7089172:-1 gene:Os01g0228300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mpv17/PMP22 family protein. (Os01t0228300-01)
Sequence

CTCTCTCCTCTCCTCTCGCCGTCGCCAATTCTCTCCTCCTCCTTCCCCCGTGGGGATGCG
GCGGCTATGGCGGTGGTACCAGCAGTGCCTGGCCACCCACCCCGTGCGCACGCAGGTGGT
CAGCTCCGGCATCCTCTGGGGCCTCGGCGACATCGGCGCCCAGGCCGTCACCCACTACTC
CGCCCCCGGACGCCCCCGCCACCACCAGCACCACGCCAAGAATCCTCCCGAGGATAAAGA
TAAAGAGTTCAAAATTGATTGGAAGAGGGTGGGCATCACAAGCTCATTTGGATTTGCTTT
TGTTGGACCAGTTGGACATTACTGGTATGAATACTTGGATCGCTTCATCCTGAGGAGATA
CCAGCCTAAGACCTTCAAATTTGTTGCGTCAAAAGTTGCTGCGGATGGTCTCCTATTTGG
ACCAGTAGATCTTCTCTTGTTCTTCTCATATGTTGGTCTTGCATCAGGAAGGAGTGTAGA
GCAGGTGAAGGATGATGTGAAGAGGGACTTCATTCCTGCTCTAGTTCTAGGGGGAACCAT
CTGGCCAGCCGTGCAAATCGCAAATTTCCGCTTCATTCCTGTGCGATATCAGCTCCTTTA
CGTGAACCTGTTCTGCCTCTTAGACAGTTGCTTCTTGTCGTGGATCGATCAACAAGGAGA
TGCACCTTGGAAGCAATGGTTCACATCATTCCAGAAAATCGAAGGCCAGAAGGGCAAGGT
TTGATGTGGATCAGGCACGGTCCTTTTGACATGGTCCTGGATCCAGTAACATCACCCGGC
AAAACACCGGGCATCCCAGAAAATTTGTCTTCTGTCATTTGGATCAACCTTTGTATGCTT
TGGCTGATCCATGAAAAAAACACTGGAAAAGAGAAACACTTGCTGCTATGGTAGCAATTG
TTTTAAGCGCAATTGCAGTACCAAGCAGAGCTGAGCATCAATATCTGTGTAGAGATTTGT
TTCATGTTTAATGCCAAGGAAAATATTGCTC