Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0226400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6970912:6976706:-1 gene:Os01g0226400 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0226400-01)
Sequence	ATGGAGGGGAAGCACGTGGTGATGTCGGCGGTGGGGATCGGGATAGGCGTCGGGGTGGGG CTGGGGCTGGCGTCCGCGCCGTGGGCAGGCGGCGGCGGGCAGGGGGCGAGGGTCGGGGTT ACGGTGGAGAGGGTGGAGCAGGAGCTCCGCCGCCTCGTCGTCGACGGCGCCGACAGCAGG GTCACCTTCGACGGGTTCCCCTACTACCTCAGCGAGCAAACGCGTGTATTGCTGACAAGC GCGGCGTATGTTCACTTGAAGCAAGCAGACATCTCACAATACACCAGGAATCTTGCACCA GCTAGCCGTGCGATTCTATTGTCAGGCCCTGCAGAACTTTACCAGCAAATGCTTGCCAAA GCGCTTGCCCACTATTTTGAAGCAAAATTGCTGTTGCTAGATCCTACAGATTTTCTCATA AAGATCCATAGCAAATATGGTGGTGGTAGCAGCACAGACTCGTCTTTCAAAAGATCCATA TCTGAGACGACCCTTGAAAAGGTGTCTGGATTACTTGGATCTCTTTCGATTCTACCACAA AAGGAGAAACCCAAAGGAACTATTCGTAGACAAAGCAGCATGACGGACATGAAATTAAGG AGCTCTGAAAGTACGAGCAGCTTCCCGAAGCTTAAAAGGAATGCCTCAACTTCATCTGAT ATGAGTAGTCTGGCATCACAAGGCCCTCCAAATAATCCAGCTTCTCTCAGACGTGCTAGC AGCTGGACTTTTGATGAGAAGATTTTGGTGCAAGCAGTATACAAGGTACTGCATTCAGTA TCTAAGAAGAACCCAATTGTTCTCTACATAAGAGATGTTGAGAAGTTTCTTCACAAGTCC AAAAAAATGTATGTCATGTTTGAAAAACTACTGAATAAACTTGAAGGGCCAGTGCTAGTC CTTGGCTCAAGAATTGTGGATATGGACTTTGATGAAGAGTTGGATGAAAGACTAACTGCT TTATTTCCATACAACATCGAAATCAAGCCACCAGAAAATGAGAACCACCTTGTGAGCTGG AACTCCCAATTAGAAGAAGATATGAAGATGATTCAGTTCCAGGATAACCGGAACCATATT ACGGAAGTCCTTGCCGAAAACGACCTTGAGTGTGATGATTTAGGCTCGATATGCCTATCT GATACTATGGTTCTAGGTAGGTACATTGAGGAGATTGTGGTTTCAGCAGTTTCTTATCAC CTGATGAATAAGAAAGATCCGGAGTACCGAAACGGAAAATTACTTCTATCTGCAAAGAGC TTGTCCCATGCACTGGAAATTTTTCAAGAGAACAAGATGTATGATAAGGATAGCATGAAG TTGGAAGCAAAGCGTGATGCTTCAAAGGTGGCTGACAGGGGAATTGCTCCATTTGCTGCA AAATCAGAAACAAAACCTGCAACTTTGCTACCACCAGTACCTCCTACAGCTGCTGCTGCC CCTCCTGTTGAGAGCAAAGCAGAACCAGAGAAATTCGAGAAGAAGGATAATCCATCTCCA GCTGCAAAAGCACCTGAAATGCCGCCAGACAATGAGTTTGAAAAGCGCATCAGACCTGAA GTGATACCTGCTAATGAAATCGGTGTCACATTTGATGATATCGGTGCATTAAGTGATATC AAAGAATCCCTTCAAGAACTTGTCATGCTCCCTCTCAGAAGACCAGATCTCTTCAAAGGG GGTCTTCTTAAACCTTGCAGAGGTATATTACTTTTTGGTCCTCCTGGAACTGGCAAGACG ATGCTAGCCAAGGCTATTGCAAATGAAGCTCAAGCGAGTTTCATAAATGTTTCAATGTCG ACTATCACATCGAAATGGTTTGGTGAAGATGAAAAGAATGTTAGAGCATTGTTCACATTA GCTGCCAAAGTATCACCGACGATCATTTTTGTCGATGAGGTCGACAGCATGCTTGGTCAG CGGAACAGAGCTGGAGAGCACGAGGCAATGAGGAAGATAAAAAATGAGTTCATGACACAC TGGGATGGCCTCTTGTCAAGACCAGATCAAAAAATTCTTGTCCTTGCTGCGACCAACCGA CCCTTTGATCTTGATGAAGCTATCATTCGAAGGTTTGAGCGCAGGATCATGGTCGGCCTG CCATCATTGGAAAGTCGGGAATTGATTTTGAGGAGCCTTCTGTCGAAGGAGAAAGTTGAT GGCGGTCTAGACTATAAGGAACTAGCCACCATGACTGAAGGATATAGTGGCAGTGATCTA AAGAACCTGTGCACAACAGCAGCGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGA AAGAAGGAACTGGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATG AAAGAGAAGGACGAGACGATCATACTAAGGCCACTAAACATGAAAGATTTGAAAGAAGCA AAAAACCAGGTGGCGGCAAGCTTTGCTGCTGAAGGAACAATAATGGGTGAGCTGAAGCAA TGGAATGAGTTGTACGGTGAAGGAGGCTCCAGAAAGAAACAACAGTTGACATACTTTCTC TGA

Peptide Sequence

PEP ID	Os01t0226400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6970912:6976706:-1 gene:Os01g0226400 transcript:Os01t0226400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0226400-01)
Sequence	MEGKHVVMSAVGIGIGVGVGLGLASAPWAGGGGQGARVGVTVERVEQELRRLVVDGADSR VTFDGFPYYLSEQTRVLLTSAAYVHLKQADISQYTRNLAPASRAILLSGPAELYQQMLAK ALAHYFEAKLLLLDPTDFLIKIHSKYGGGSSTDSSFKRSISETTLEKVSGLLGSLSILPQ KEKPKGTIRRQSSMTDMKLRSSESTSSFPKLKRNASTSSDMSSLASQGPPNNPASLRRAS SWTFDEKILVQAVYKVLHSVSKKNPIVLYIRDVEKFLHKSKKMYVMFEKLLNKLEGPVLV LGSRIVDMDFDEELDERLTALFPYNIEIKPPENENHLVSWNSQLEEDMKMIQFQDNRNHI TEVLAENDLECDDLGSICLSDTMVLGRYIEEIVVSAVSYHLMNKKDPEYRNGKLLLSAKS LSHALEIFQENKMYDKDSMKLEAKRDASKVADRGIAPFAAKSETKPATLLPPVPPTAAAA PPVESKAEPEKFEKKDNPSPAAKAPEMPPDNEFEKRIRPEVIPANEIGVTFDDIGALSDI KESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAQASFINVSMS TITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRNRAGEHEAMRKIKNEFMTH WDGLLSRPDQKILVLAATNRPFDLDEAIIRRFERRIMVGLPSLESRELILRSLLSKEKVD GGLDYKELATMTEGYSGSDLKNLCTTAAYRPVRELIQKERKKELEKKREQGGNASDASKM KEKDETIILRPLNMKDLKEAKNQVAASFAAEGTIMGELKQWNELYGEGGSRKKQQLTYFL

Transcript Sequence

Transcript ID	Os01t0226400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6970912:6976706:-1 gene:Os01g0226400 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0226400-01)
Sequence	AGTAGCTGTTGTTGGTTGTTCCCTCCCTCCTTCCCATCCATTCTCGCCGAGCCACCCATT CCGCCACCTCCACCCCTCCCCCGCATTAACCCTCCTCCTCCGCTCGCCGCGCCGCGCCAC CGATCGATCGCTGCGCTCCGTGCGTCTCACCACCTTGCTAGGAGGACGAACGCCGGCGGC GGGGAGGGGATGGAGGGGAAGCACGTGGTGATGTCGGCGGTGGGGATCGGGATAGGCGTC GGGGTGGGGCTGGGGCTGGCGTCCGCGCCGTGGGCAGGCGGCGGCGGGCAGGGGGCGAGG GTCGGGGTTACGGTGGAGAGGGTGGAGCAGGAGCTCCGCCGCCTCGTCGTCGACGGCGCC GACAGCAGGGTCACCTTCGACGGGTTCCCCTACTACCTCAGCGAGCAAACGCGTGTATTG CTGACAAGCGCGGCGTATGTTCACTTGAAGCAAGCAGACATCTCACAATACACCAGGAAT CTTGCACCAGCTAGCCGTGCGATTCTATTGTCAGGCCCTGCAGAACTTTACCAGCAAATG CTTGCCAAAGCGCTTGCCCACTATTTTGAAGCAAAATTGCTGTTGCTAGATCCTACAGAT TTTCTCATAAAGATCCATAGCAAATATGGTGGTGGTAGCAGCACAGACTCGTCTTTCAAA AGATCCATATCTGAGACGACCCTTGAAAAGGTGTCTGGATTACTTGGATCTCTTTCGATT CTACCACAAAAGGAGAAACCCAAAGGAACTATTCGTAGACAAAGCAGCATGACGGACATG AAATTAAGGAGCTCTGAAAGTACGAGCAGCTTCCCGAAGCTTAAAAGGAATGCCTCAACT TCATCTGATATGAGTAGTCTGGCATCACAAGGCCCTCCAAATAATCCAGCTTCTCTCAGA CGTGCTAGCAGCTGGACTTTTGATGAGAAGATTTTGGTGCAAGCAGTATACAAGGTACTG CATTCAGTATCTAAGAAGAACCCAATTGTTCTCTACATAAGAGATGTTGAGAAGTTTCTT CACAAGTCCAAAAAAATGTATGTCATGTTTGAAAAACTACTGAATAAACTTGAAGGGCCA GTGCTAGTCCTTGGCTCAAGAATTGTGGATATGGACTTTGATGAAGAGTTGGATGAAAGA CTAACTGCTTTATTTCCATACAACATCGAAATCAAGCCACCAGAAAATGAGAACCACCTT GTGAGCTGGAACTCCCAATTAGAAGAAGATATGAAGATGATTCAGTTCCAGGATAACCGG AACCATATTACGGAAGTCCTTGCCGAAAACGACCTTGAGTGTGATGATTTAGGCTCGATA TGCCTATCTGATACTATGGTTCTAGGTAGGTACATTGAGGAGATTGTGGTTTCAGCAGTT TCTTATCACCTGATGAATAAGAAAGATCCGGAGTACCGAAACGGAAAATTACTTCTATCT GCAAAGAGCTTGTCCCATGCACTGGAAATTTTTCAAGAGAACAAGATGTATGATAAGGAT AGCATGAAGTTGGAAGCAAAGCGTGATGCTTCAAAGGTGGCTGACAGGGGAATTGCTCCA TTTGCTGCAAAATCAGAAACAAAACCTGCAACTTTGCTACCACCAGTACCTCCTACAGCT GCTGCTGCCCCTCCTGTTGAGAGCAAAGCAGAACCAGAGAAATTCGAGAAGAAGGATAAT CCATCTCCAGCTGCAAAAGCACCTGAAATGCCGCCAGACAATGAGTTTGAAAAGCGCATC AGACCTGAAGTGATACCTGCTAATGAAATCGGTGTCACATTTGATGATATCGGTGCATTA AGTGATATCAAAGAATCCCTTCAAGAACTTGTCATGCTCCCTCTCAGAAGACCAGATCTC TTCAAAGGGGGTCTTCTTAAACCTTGCAGAGGTATATTACTTTTTGGTCCTCCTGGAACT GGCAAGACGATGCTAGCCAAGGCTATTGCAAATGAAGCTCAAGCGAGTTTCATAAATGTT TCAATGTCGACTATCACATCGAAATGGTTTGGTGAAGATGAAAAGAATGTTAGAGCATTG TTCACATTAGCTGCCAAAGTATCACCGACGATCATTTTTGTCGATGAGGTCGACAGCATG CTTGGTCAGCGGAACAGAGCTGGAGAGCACGAGGCAATGAGGAAGATAAAAAATGAGTTC ATGACACACTGGGATGGCCTCTTGTCAAGACCAGATCAAAAAATTCTTGTCCTTGCTGCG ACCAACCGACCCTTTGATCTTGATGAAGCTATCATTCGAAGGTTTGAGCGCAGGATCATG GTCGGCCTGCCATCATTGGAAAGTCGGGAATTGATTTTGAGGAGCCTTCTGTCGAAGGAG AAAGTTGATGGCGGTCTAGACTATAAGGAACTAGCCACCATGACTGAAGGATATAGTGGC AGTGATCTAAAGAACCTGTGCACAACAGCAGCGTATCGTCCAGTGAGGGAACTGATCCAA AAGGAAAGAAAGAAGGAACTGGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCT TCGAAGATGAAAGAGAAGGACGAGACGATCATACTAAGGCCACTAAACATGAAAGATTTG AAAGAAGCAAAAAACCAGGTGGCGGCAAGCTTTGCTGCTGAAGGAACAATAATGGGTGAG CTGAAGCAATGGAATGAGTTGTACGGTGAAGGAGGCTCCAGAAAGAAACAACAGTTGACA TACTTTCTCTGAACTATCTAAATATCCAGAGTGTATGAACATAATTTGAAAACTAGAATA GACGGAAAACAACCATGTGAAAATAGTCCAGTGTTTTAAGTTCCACCAGTTAAGAATGTT TGGGACCAAAGGAGCCTGGTTATGAAACCGGTTTTTTTTTGTTGTAAAACTTGATAGAGA ACTTCCATACACAGGGACTATGTTTTGCCTGC