Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0225600-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:6922127:6922762:-1 gene:Os01g0225600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN description:Similar to Dehydrin. (Os01t0225600-00)
Sequence

ATGGCGCAGCTGGTGGACAAGGCGAAGGGGTTCGTGGCGGACAAGGTGGCGCGGGTGGAG
AAGCCGGAGGCGGAGCTGGCCGAGCTGTCGTTCCAGAGCGTGGGCCGCGGCGGCGCCACC
CTCGCGGGGCGCGTGGACGTGCGCAACCCCTACTCCCACTCCATCCCGATCTGCGAGGTG
AGCTACTCGCTGAAGAGCGCCGGGAGGGAGGTGGCGTCGGGGACGATGCCCGACCCGGGG
TCGCTCACCGCCGGCGACACCACGCGGCTGGACATCCCGGTGAAGGTGCCGTACGACTTC
CTGGTGAGCCTCGCCAGGGACGCCGGCAGGGACTGGGACATCGACTACGAGATGAGGGTC
GGCCTCACCGTCGACCTCCCCATCCTCGGCAACTTCACCCTGCCGCTCACCAAGTCCGGC
GAGCTCAAGCTCCCCACCCTCTCCGACGTCTTCTAA

Peptide Sequence

PEP ID

Os01t0225600-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:6922127:6922762:-1 gene:Os01g0225600 transcript:Os01t0225600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN description:Similar to Dehydrin. (Os01t0225600-00)
Sequence

MAQLVDKAKGFVADKVARVEKPEAELAELSFQSVGRGGATLAGRVDVRNPYSHSIPICEV
SYSLKSAGREVASGTMPDPGSLTAGDTTRLDIPVKVPYDFLVSLARDAGRDWDIDYEMRV
GLTVDLPILGNFTLPLTKSGELKLPTLSDVF

Transcript Sequence

Transcript ID

Os01t0225600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:6922127:6922762:-1 gene:Os01g0225600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN description:Similar to Dehydrin. (Os01t0225600-00)
Sequence

CTAACACAGTACAGCGACGACGACAGATTAACCGAGAGCGATCGATCAACCAAATCAGAA
TCAGGGCAAGAAACAATGGCGCAGCTGGTGGACAAGGCGAAGGGGTTCGTGGCGGACAAG
GTGGCGCGGGTGGAGAAGCCGGAGGCGGAGCTGGCCGAGCTGTCGTTCCAGAGCGTGGGC
CGCGGCGGCGCCACCCTCGCGGGGCGCGTGGACGTGCGCAACCCCTACTCCCACTCCATC
CCGATCTGCGAGGTGAGCTACTCGCTGAAGAGCGCCGGGAGGGAGGTGGCGTCGGGGACG
ATGCCCGACCCGGGGTCGCTCACCGCCGGCGACACCACGCGGCTGGACATCCCGGTGAAG
GTGCCGTACGACTTCCTGGTGAGCCTCGCCAGGGACGCCGGCAGGGACTGGGACATCGAC
TACGAGATGAGGGTCGGCCTCACCGTCGACCTCCCCATCCTCGGCAACTTCACCCTGCCG
CTCACCAAGTCCGGCGAGCTCAAGCTCCCCACCCTCTCCGACGTCTTCTAAATCGGCATC
GTGCACACGTACGGGCCGAGTGTACGAGAACTTGTGTATTTCCAGACTTCTGGAGTAATA
ATAAAGAACACGAGTGGTTGGTTAATCGCGAATCGT