Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0225500-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:6912812:6915127:-1 gene:Os01g0225500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KPHMT2 description:Similar to 3-methyl-2-oxobutanoate hydroxymethyltransferase. (Os01t0225500-00)
Sequence	ATGTCTTTCTCCCGCCTCCTAACCCCAAGAATTCTCCTGGACACCACCGCCGTGTTCCCG CCAAGCAGCAGCGTCGTCGCCCCGTCGCTCTCCCGCCAACTGCGGTGCACGCGCACGGGT GGGTCGCCGCCGGCGCCGCCGCATAGGCTCGTGGCGCGGCGGGCGATGAGCAACGGGGCG GCGGAGCCGGCCATCTACGGCGGCGGCGGCGGCGCACAACAGGCGGCGTCGTCTGCTGCG GCGCGGCGCGTGACGCTGGCGACGCTCCGCGGGAAGCACCGGCGCGGGGAGCCGATCAGC ATGGTGACCGCCTACGACTACCCGTCCGGGGTGCACGTCGACGCCGCCGGGTTCGACATC TGCCTCGTCGGCGACTCCGCCGCCATGGTCGCGCACGGCCACGACAACACCCTCCCCATC TCCCTCGACCTCATGATCGAGCACTGCCGCGCCGTGGCGCGCGGCGCGGCCAGGACGTTC CTCGTCGGCGACCTCCCGTTCGGCAGCTACGAGGCCTCCACCGCACAGGCTGTCGGCTCG GCGGTGAGGGTGATGAAGGAAGGCGGCGTGAATTCAATCAAGCTGGAAGGGAGCGCGCCG TCGAGGATCAGCGCGGCGAGGGCCATCGTGGACGCCGGGATCGCCGTGATGGGGCACATC GGGCTCACGCCGCAGTCCGTCAGCGCGCTCGGCGGGTTCCGGCCACAGGGGAAGACGGTC GAGAGCGCCGTCAAGGTCGTGGAGGCGGCGCTCGCGTTGCAGGAGGCCGGCTGCTTCGCC GTCGTGCTGGAGTGCGTGCCGGCTCCGGTGGCGGCGGCGGCGACTTCGGCACTGACAATC CCGACCATTGGCATCGGCGCCGGGCCATTCTGCAGCGGGCAGGTCTTAGTCTACCACGAC TTGTTAGGGACGTTCCAAACAAGTCATGCCAAGGTCTCGCCAAAATTCTGTAAACAGTAT GGTAACATTGGGGACGTGATTAACAGAGCTCTATCAAAGTACAAGCAAGAGGTGGAAACC CAGTCTTTTCCGGGTCCTAGTCACACGCCCTACAAACTAGCTGCCACAGATGTTGATGCC TTTCTGAATGCGCTGAAGATGAAGGGCCTGAATGTGGCTGCTGATGCTGCAGCCGATGCT GTTGAATATACAGATGAGAAAGAGATAAATGGAACGCCGCAGCTCAAGGTCTATGCTTGA

Peptide Sequence

PEP ID	Os01t0225500-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:6912812:6915127:-1 gene:Os01g0225500 transcript:Os01t0225500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KPHMT2 description:Similar to 3-methyl-2-oxobutanoate hydroxymethyltransferase. (Os01t0225500-00)
Sequence	MSFSRLLTPRILLDTTAVFPPSSSVVAPSLSRQLRCTRTGGSPPAPPHRLVARRAMSNGA AEPAIYGGGGGAQQAASSAAARRVTLATLRGKHRRGEPISMVTAYDYPSGVHVDAAGFDI CLVGDSAAMVAHGHDNTLPISLDLMIEHCRAVARGAARTFLVGDLPFGSYEASTAQAVGS AVRVMKEGGVNSIKLEGSAPSRISAARAIVDAGIAVMGHIGLTPQSVSALGGFRPQGKTV ESAVKVVEAALALQEAGCFAVVLECVPAPVAAAATSALTIPTIGIGAGPFCSGQVLVYHD LLGTFQTSHAKVSPKFCKQYGNIGDVINRALSKYKQEVETQSFPGPSHTPYKLAATDVDA FLNALKMKGLNVAADAAADAVEYTDEKEINGTPQLKVYA

Transcript Sequence

Transcript ID	Os01t0225500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6912812:6915127:-1 gene:Os01g0225500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KPHMT2 description:Similar to 3-methyl-2-oxobutanoate hydroxymethyltransferase. (Os01t0225500-00)
Sequence	ACCAAACTGCAGCTGAAATCCAAAGACCTAAGCTTACCAGTAGCCCACTAGGCATCCGGG CTCCCGAATAGCCGACATGTCTTTCTCCCGCCTCCTAACCCCAAGAATTCTCCTGGACAC CACCGCCGTGTTCCCGCCAAGCAGCAGCGTCGTCGCCCCGTCGCTCTCCCGCCAACTGCG GTGCACGCGCACGGGTGGGTCGCCGCCGGCGCCGCCGCATAGGCTCGTGGCGCGGCGGGC GATGAGCAACGGGGCGGCGGAGCCGGCCATCTACGGCGGCGGCGGCGGCGCACAACAGGC GGCGTCGTCTGCTGCGGCGCGGCGCGTGACGCTGGCGACGCTCCGCGGGAAGCACCGGCG CGGGGAGCCGATCAGCATGGTGACCGCCTACGACTACCCGTCCGGGGTGCACGTCGACGC CGCCGGGTTCGACATCTGCCTCGTCGGCGACTCCGCCGCCATGGTCGCGCACGGCCACGA CAACACCCTCCCCATCTCCCTCGACCTCATGATCGAGCACTGCCGCGCCGTGGCGCGCGG CGCGGCCAGGACGTTCCTCGTCGGCGACCTCCCGTTCGGCAGCTACGAGGCCTCCACCGC ACAGGCTGTCGGCTCGGCGGTGAGGGTGATGAAGGAAGGCGGCGTGAATTCAATCAAGCT GGAAGGGAGCGCGCCGTCGAGGATCAGCGCGGCGAGGGCCATCGTGGACGCCGGGATCGC CGTGATGGGGCACATCGGGCTCACGCCGCAGTCCGTCAGCGCGCTCGGCGGGTTCCGGCC ACAGGGGAAGACGGTCGAGAGCGCCGTCAAGGTCGTGGAGGCGGCGCTCGCGTTGCAGGA GGCCGGCTGCTTCGCCGTCGTGCTGGAGTGCGTGCCGGCTCCGGTGGCGGCGGCGGCGAC TTCGGCACTGACAATCCCGACCATTGGCATCGGCGCCGGGCCATTCTGCAGCGGGCAGGT CTTAGTCTACCACGACTTGTTAGGGACGTTCCAAACAAGTCATGCCAAGGTCTCGCCAAA ATTCTGTAAACAGTATGGTAACATTGGGGACGTGATTAACAGAGCTCTATCAAAGTACAA GCAAGAGGTGGAAACCCAGTCTTTTCCGGGTCCTAGTCACACGCCCTACAAACTAGCTGC CACAGATGTTGATGCCTTTCTGAATGCGCTGAAGATGAAGGGCCTGAATGTGGCTGCTGA TGCTGCAGCCGATGCTGTTGAATATACAGATGAGAAAGAGATAAATGGAACGCCGCAGCT CAAGGTCTATGCTTGATTGTTCCTAGCTAGCTAGCAATGGATGAATAGCAATATGGTTTG ATTTATCGCAAAATAAATAAATGATTTGGTTGCTGAATGAAGCTGAATCTGAATCTGAAG AGTGAAGACCCATCAAGTGTTATGATCTTCTTTAGGTGTATTTGACCATGGATGCATGGG GATTTCTTATTTTTTGTGAAGTATAACGTGAGTGTTGTATGCATGAAGTATGTATGGGGA GTGCACTCAAACCTATC