Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0224500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:6841600:6843524:-1 gene:Os01g0224500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0224500-01)
Sequence

ATGGTGAAGGGGAGGCCGAAGCCCACACCGGTGAACGCGCCGGCGGAGGTCGTCTTCGAC
CCGTCCGCGCCCGGTGCCCGGAGGCCCCGCCGCCCTGGGGCGCCTTCGTCGTCGTCGTCG
ACTGGCGAGTGGCACAACTTCATGGGATCGAGTCTTTCGGATATGTATCGGAAGCCAGCT
GCGGAAAAATCTGATGATACTTCTGATGATGATGAGGAGCCTGACATTGATATTGGGAAG
TTGTTGAAAGATGTAGAGCTTTTCGGTGCATCTACATGGAAGGAACGGAAGCAATTAGAG
AACCGTAAAGTAGTTCAGTTGGGTGGAAAGGCCATTAAGAAGCACCGAACGCCGTTAAGT
GTATCAAAGCCAGCTATGAAGAACCAAAAGAAAAGAGAAGAGAAGAAAGCGGAAGAGGAA
AGACTACTTGGAATATTTAGGAAACGGGATTCCAAGAACAGCAAAGCTCAAAAGACTAGA
CCTGAGGACCGAGTACTTAGGGCTACCCAAGGGCACTTCAAGAATGGTATACTTGATGTC
AAGCATCTTTTGGCACCACCCAAACTATCGGGTCGGGATGCGCCTGAGCAGAAAATGAGA
ATGGGCAAGAAAAATGGCAAGGGAAAGCAGAAGGGAGGCAGAAGGAAGAGACGTTAG

Peptide Sequence

PEP ID

Os01t0224500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:6841600:6843524:-1 gene:Os01g0224500 transcript:Os01t0224500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0224500-01)
Sequence

MVKGRPKPTPVNAPAEVVFDPSAPGARRPRRPGAPSSSSSTGEWHNFMGSSLSDMYRKPA
AEKSDDTSDDDEEPDIDIGKLLKDVELFGASTWKERKQLENRKVVQLGGKAIKKHRTPLS
VSKPAMKNQKKREEKKAEEERLLGIFRKRDSKNSKAQKTRPEDRVLRATQGHFKNGILDV
KHLLAPPKLSGRDAPEQKMRMGKKNGKGKQKGGRRKRR

Transcript Sequence

Transcript ID

Os01t0224500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:6841600:6843524:-1 gene:Os01g0224500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0224500-01)
Sequence

GCGCGCCGCCGCCGCCGCATCGACCGACGGGAGAGTCAAGCAGGAGGAGGAGGGAAGGAG
GGAGAGGATGGTGAAGGGGAGGCCGAAGCCCACACCGGTGAACGCGCCGGCGGAGGTCGT
CTTCGACCCGTCCGCGCCCGGTGCCCGGAGGCCCCGCCGCCCTGGGGCGCCTTCGTCGTC
GTCGTCGACTGGCGAGTGGCACAACTTCATGGGATCGAGTCTTTCGGATATGTATCGGAA
GCCAGCTGCGGAAAAATCTGATGATACTTCTGATGATGATGAGGAGCCTGACATTGATAT
TGGGAAGTTGTTGAAAGATGTAGAGCTTTTCGGTGCATCTACATGGAAGGAACGGAAGCA
ATTAGAGAACCGTAAAGTAGTTCAGTTGGGTGGAAAGGCCATTAAGAAGCACCGAACGCC
GTTAAGTGTATCAAAGCCAGCTATGAAGAACCAAAAGAAAAGAGAAGAGAAGAAAGCGGA
AGAGGAAAGACTACTTGGAATATTTAGGAAACGGGATTCCAAGAACAGCAAAGCTCAAAA
GACTAGACCTGAGGACCGAGTACTTAGGGCTACCCAAGGGCACTTCAAGAATGGTATACT
TGATGTCAAGCATCTTTTGGCACCACCCAAACTATCGGGTCGGGATGCGCCTGAGCAGAA
AATGAGAATGGGCAAGAAAAATGGCAAGGGAAAGCAGAAGGGAGGCAGAAGGAAGAGACG
TTAGATAAAACACCCTATTAGCTTTTGTATTAAGATGGACTCATCATCTACTTGTATCTT
TCAGTGTAAAGATCGAAAACATTTTGCAGAGGCATGTTTTGTTTCAGTGTCT