Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0222500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6699636:6703371:-1 gene:Os01g0222500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit). (Os01t0222500-01)
Sequence	ATGATGAACGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAG GAGGCCGTCGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAG AAACTACAGCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAG AAGCAAGGTGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTT GAAGTTCTGCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAG CTACTGTACATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTT CAGAGCTTGCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGT GAGCTTGTTGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACAAAGCAAATATA TATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTAT GAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATA GTCTGTGAAAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTACCAGAG ATTCGTCGAAGCCTTCTTGGGCAGGTAGCTGCTTGA

Peptide Sequence

PEP ID	Os01t0222500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6699636:6703371:-1 gene:Os01g0222500 transcript:Os01t0222500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit). (Os01t0222500-01)
Sequence	MMNDGDVARQLKQMTDFIRQEAVEKAAEIEAAAAEEFQIEKLQLVEAEKKRIRLEFERNE KQGDIKKKIEYSKQLNASRLEVLQAQDDLAMSMLEAAGKELLYITRDHHVYKNLLRIFIV QSLLRLKEPAVILRCRKEDRELVESVLESAKNEYADKANIYPPEIMVDRNVYLPPAPSHY EAHGPSCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPEIRRSLLGQVAA

Transcript Sequence

Transcript ID	Os01t0222500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6699636:6703371:-1 gene:Os01g0222500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit). (Os01t0222500-01)
Sequence	ATCGCCACCTCGGCGCATCCACGCAACCCACCCGTCGCGAGTCGCGAGCAGATCAAAAAC CCCATCGCCGCGGCGATCACCGGAGGGACCAGGCCGGGCGGCCATCCGTACTCCGCCGCG ATGATGAACGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAG GAGGCCGTCGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAG AAACTACAGCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAG AAGCAAGGTGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTT GAAGTTCTGCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAG CTACTGTACATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTT CAGAGCTTGCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGT GAGCTTGTTGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACAAAGCAAATATA TATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTAT GAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATA GTCTGTGAAAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTACCAGAG ATTCGTCGAAGCCTTCTTGGGCAGGTAGCTGCTTGACCGATTCATAAATACAGGATGCTG CACAATACCGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGA TTTATCACTTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGAGCCACTGTCATCAA ACTACAGACCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATT TCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAG AAGACAATCCATTGTCATTTATTCATCTGTTATTTGTTTTTGTTTTCATGGAAATAATAT ACCAAGGCCTCTCTTAGAATG