Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0221300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:6642665:6645159:-1 gene:Os01g0221300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0221300-01)
Sequence

CAGTCTCCGGCTGACGCTGTCGCTAGGGTTCAGCCACCGCCGCCGCCGCCGCCGCGACCG
CCGGAGATGAGCGCCGCGGCGAAGGCCGCCGCGCTCGAGGTAGTGCTCGCCGCCAAGTCG
TCCCGTATCGCCTCCCTCGAGGCCAGGGTCTCCTTCCTCGAAGCCGAGAACGCGCGCTTG
AGGAGGGCCATGGCGGATCGTAGTACAGGTAAGGGAGGCCCAAATCTCCGTCGATCGGAG
GAGATGGCGGGAGGGCGTGTGGCGCGTGATGTCATTGAGGTTAGTGATGGCGAGGAGGAG
GGGATGGCTGTTGACGTCAGGAAGGGGAGAGGCGCGGAGGAGGGGATGGATGCGGTTGCG
ACTCCTCGGAAGCGTGCTGCTTTGCGGGTGGTGATCGGCGAGAGCGGGGATGAATACGAG
ATTGATGACGCCAAGGGGGATGGTGATGGTGATGGAGGCGACCATGGGAGCGTTAGCTGT
GGCGACAATGTGGGTCTCGAGGATGATGATGTTACAACCGCGCTGCCCGATAGGAAGCGC
GCCGCCGCGCTGGTTGTCACCAGCGATAGTGAAGATGAGGTTGAGAGCCAGGGTGGCCAT
GGGAGGAGGGGCAAGGATGGTAGTAGGAAGCGTGCTTTGCGTGGCGTCCGAGACAATGGG
AATGAGGACAAGGGCGTCACGCGGAGTAGGAAGCGTGCTCTGCGTGGAATCAGTGACAAT
GAGGACGAAGATGAGGATGAGGATGGTGTCGATGGTGCTCATGTAGTCGTGACAGAGATC
GAGAGTAGTGATGATGATATGATTCCCATTCGTGAAGTGGTCAAGAAGATGAGAAAAGAG
AGGGCGAGCAAGGGTGGTGGTGGATTCGGTGAGACTAATGGGTCTTCCACACCTGCAACC
AGGCGTTCGGCTCGGTTAGCTAAAGGTCAGCCAAAGAGAGCACAGTCTGCGCGTCGGGTG
CTCAACTTTGTTGAACCCAAGGATTGTGAAGAGAGTGCGAGTGACTCAGATGAAGATGAT
GATTTGGATGACTTTATAATAAATGATTCGGATTGTTCAGAAAATTCTGCGAATTCTGCT
GAACCAGAAGAATCTGATGCTTCTGCCCCCAGTGAAGGATCCTCTTCAGAACTTGAAGAG
TCTGACAATGAGATAGACTATAAAGACGTTATGGCTTGCATAGGCCGTAAAAGGAATGCC
AAGGAATGGAAGTATGAGGCAGAGATGCTATCTGCATTTGCTGCACACCCTGAACTTTGC
TTGAAAGCTGTTTGTGCTCTCTATCGAAAGCAAACTAAGGATGAACAGGAAGTAAAGGCC
ACCATTTTGCATAACAAGCAAGGATTTAACCAGATTGATGCCGCAAGGGGATCTTCCATA
GCGGAGTTTCTTCTTGATGGTGATACTTTTGGCCCGCTTAAGAAGACTGTCCATGATTTG
GAGCAGTACGATCGTTATGCTCTTGAATTCTGTCACAAGCTCGCCGCACGTTACTCAAAA
CAGTTGTTTTCAATATATCAGAACAAGGAGGACCCCTACTTCCATCCATGA

Peptide Sequence

PEP ID

Os01t0221300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:6642665:6645159:-1 gene:Os01g0221300 transcript:Os01t0221300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0221300-01)
Sequence

QSPADAVARVQPPPPPPPRPPEMSAAAKAAALEVVLAAKSSRIASLEARVSFLEAENARL
RRAMADRSTGKGGPNLRRSEEMAGGRVARDVIEVSDGEEEGMAVDVRKGRGAEEGMDAVA
TPRKRAALRVVIGESGDEYEIDDAKGDGDGDGGDHGSVSCGDNVGLEDDDVTTALPDRKR
AAALVVTSDSEDEVESQGGHGRRGKDGSRKRALRGVRDNGNEDKGVTRSRKRALRGISDN
EDEDEDEDGVDGAHVVVTEIESSDDDMIPIREVVKKMRKERASKGGGGFGETNGSSTPAT
RRSARLAKGQPKRAQSARRVLNFVEPKDCEESASDSDEDDDLDDFIINDSDCSENSANSA
EPEESDASAPSEGSSSELEESDNEIDYKDVMACIGRKRNAKEWKYEAEMLSAFAAHPELC
LKAVCALYRKQTKDEQEVKATILHNKQGFNQIDAARGSSIAEFLLDGDTFGPLKKTVHDL
EQYDRYALEFCHKLAARYSKQLFSIYQNKEDPYFHP

Transcript Sequence

Transcript ID

Os01t0221300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:6642665:6645159:-1 gene:Os01g0221300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0221300-01)
Sequence

ATCAGTCTCCGGCTGACGCTGTCGCTAGGGTTCAGCCACCGCCGCCGCCGCCGCCGCGAC
CGCCGGAGATGAGCGCCGCGGCGAAGGCCGCCGCGCTCGAGGTAGTGCTCGCCGCCAAGT
CGTCCCGTATCGCCTCCCTCGAGGCCAGGGTCTCCTTCCTCGAAGCCGAGAACGCGCGCT
TGAGGAGGGCCATGGCGGATCGTAGTACAGGTAAGGGAGGCCCAAATCTCCGTCGATCGG
AGGAGATGGCGGGAGGGCGTGTGGCGCGTGATGTCATTGAGGTTAGTGATGGCGAGGAGG
AGGGGATGGCTGTTGACGTCAGGAAGGGGAGAGGCGCGGAGGAGGGGATGGATGCGGTTG
CGACTCCTCGGAAGCGTGCTGCTTTGCGGGTGGTGATCGGCGAGAGCGGGGATGAATACG
AGATTGATGACGCCAAGGGGGATGGTGATGGTGATGGAGGCGACCATGGGAGCGTTAGCT
GTGGCGACAATGTGGGTCTCGAGGATGATGATGTTACAACCGCGCTGCCCGATAGGAAGC
GCGCCGCCGCGCTGGTTGTCACCAGCGATAGTGAAGATGAGGTTGAGAGCCAGGGTGGCC
ATGGGAGGAGGGGCAAGGATGGTAGTAGGAAGCGTGCTTTGCGTGGCGTCCGAGACAATG
GGAATGAGGACAAGGGCGTCACGCGGAGTAGGAAGCGTGCTCTGCGTGGAATCAGTGACA
ATGAGGACGAAGATGAGGATGAGGATGGTGTCGATGGTGCTCATGTAGTCGTGACAGAGA
TCGAGAGTAGTGATGATGATATGATTCCCATTCGTGAAGTGGTCAAGAAGATGAGAAAAG
AGAGGGCGAGCAAGGGTGGTGGTGGATTCGGTGAGACTAATGGGTCTTCCACACCTGCAA
CCAGGCGTTCGGCTCGGTTAGCTAAAGGTCAGCCAAAGAGAGCACAGTCTGCGCGTCGGG
TGCTCAACTTTGTTGAACCCAAGGATTGTGAAGAGAGTGCGAGTGACTCAGATGAAGATG
ATGATTTGGATGACTTTATAATAAATGATTCGGATTGTTCAGAAAATTCTGCGAATTCTG
CTGAACCAGAAGAATCTGATGCTTCTGCCCCCAGTGAAGGATCCTCTTCAGAACTTGAAG
AGTCTGACAATGAGATAGACTATAAAGACGTTATGGCTTGCATAGGCCGTAAAAGGAATG
CCAAGGAATGGAAGTATGAGGCAGAGATGCTATCTGCATTTGCTGCACACCCTGAACTTT
GCTTGAAAGCTGTTTGTGCTCTCTATCGAAAGCAAACTAAGGATGAACAGGAAGTAAAGG
CCACCATTTTGCATAACAAGCAAGGATTTAACCAGATTGATGCCGCAAGGGGATCTTCCA
TAGCGGAGTTTCTTCTTGATGGTGATACTTTTGGCCCGCTTAAGAAGACTGTCCATGATT
TGGAGCAGTACGATCGTTATGCTCTTGAATTCTGTCACAAGCTCGCCGCACGTTACTCAA
AACAGTTGTTTTCAATATATCAGAACAAGGAGGACCCCTACTTCCATCCATGACTCTGGT
AATGTTAGTTCATTTGGTTGAACTTTTGTTGGTCCTTGTAATATTCTTACTACTGTACCT
ATCTTACTCTTGTAGTCTCGTGTACATATATATTTCTTCTGGAGAAGTTAGTGCTTGCTA
AGATTAAGTTTGCAGATTGCAGCCACCCTATGTTTATATCACTTAGAGGTATTTTGTTAA
GTCAAGAGTGTTTCCGTCAGAAGAGAAAGTGTCTGATGAGGTTTGCATTGTTGATACTTG
ATACCTTGGCTAACTGAATTATATCCTACGGTTATTCCCACCTAAATGAACTTGTTATAC
TACTTATC