Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0218800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6507368:6514640:-1 gene:Os01g0218800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 1 description:Similar to Trithorax 5 (Fragment). (Os01t0218800-01);Similar to SET domain protein. (Os01t0218800-02)
Sequence	ATGCTCGCGTCCCGCATCCCGCTCAAGCGCTGCACCGCCGCCGCCGTCGTCCCCCTCCCC GGGGAGTTGGAGATGGAGGAGGGGCCCACCCCCCCCGCCGGGGGTGGTGAGGGGAGCGGC GCGGCGGTGGTGCCCGCCAAGCGCCGCCGCGAGCGGGTGGTCCCCTCGCGGTTTAGGGAC TCGGTGGTGTCGCTGCCGCTGCCGCCCGCGAAGAAGGGGAGGCCCGCGAAGAAGGCGGCC GCGCGGGAGGGCGGGGACGGGGAGGTGTACGATGTGGAGGTGCGCGCGGTGGAGCAACAA GGCGCGACGGCGGCGGCCTTCGGCGCCGTGGAGACCGCGGTGTGGCCCGGCGACGAGCGG CCGGCGCAGACGGAGGAGGAGCTGTACCGGGCGTGCAGGAATATCCGCAGGAGCAGCAGC TCCAGCGGGTTCAGCGGCAGCGTGGTGACGTCGCTGAGCAATGCCGGCGGGAGCGTGGCG CCGGAGGGGAAGCCCGTGGTGGTGGTGGAGTGCAAGCCGAAGAGGGAGGGCGGCGATAAA AAGGAGGATTTTTACTGGCCGGAGGATTTCGTGCTGGGTGATGTCGTGTGGGCGAGGTCC GGGAAGAAGTGCCCAGCATGGCCTGCGGTGGTGATTGACCCACTGCTCCACGCGCCAGCG GTCGTGTTGAACTCCTGCATCCCGGGTGCACTCTGCGTCATGTTCTTTGGATTCTCTTCT GGCGGGCATGGCAGGGACTATGGATGGATTAAGCAAGGGATGATCTTTCCATTTGTGGAC TACTTAGACCGGTTTCAGGGTCAGGCTTTGTATAAACTCAAGGCAAACAGATTCCGTCAA GCAATTGAGGAGGCTTTCCTTGCTGAGCGTGGGTTTTGTGAGCTCGAAATGGATGAGGGG TGCTCACTAGAGAAGTCTGTCAATGACCAGTCTGTCCCTGACGGGTTACAGGAAGGGAGT GGTTCTAACAATGACCAGGAATGTCAATCGGAGGCTCAGGTTGTTGGCAAATCAACTGGA TGTTGTGATAGTTGTGGTAATCGTGTTCCACCCAAGATCGCGAAGAAAAAGAAGCAAGCG GGAGAGCAGTTACTCTGTAGACACTGTGATAAGCTATTGCAGTCAAAGCAGTACTGTGGC ATATGCAAGAAAATCTGGCACCACACAGATGGTGGAAATTGGGTTTGTTGTGATGAGTGT CAAATTTGGGTTCACGTAGAATGTGACCTAACATGCATCAACATGGAGGACTTAGAAAAT GCCGATTACTTCTGTCCAGATTGCAAATCAAAACGCAAGACAGTACCTCCTGTTGAACAA ATGAACACTCCGAACAGTTCAGAATGTGCTAGCACTTCTAAGGAAAAACTGCCGGAAATG ATACCTGTGTTCTGCTTTGGGATGGACGGAATGTATTTACCTAAGAAGCACATGATACTA TGCCAATGTAATTCTTGCAAAGAAAGGCTGATGAGTCTGAGTGAGTGGGAGAGACATACT GGTTCAAGGAAGAAGAACTGGAAGATGAGCGTTAAACTTAAGAGCAATGGGGATCCATTG GTAACCTTGTTGGATGATATTCCCTGCGCAAATGTGAAGTCTTCTACACCAAGTATTAAT AAAGAAGAGTTGCTGAAATTGCTAGCAAATTCTTTTAGACCTGTCAATGCTAGATGGACA ACTGAACGTTGTGCTGTTTGTCGATGGGTTGAGGATTGGGACTACAATAAAATTATTATT TGCAACAGATGCCAAATAGCTGTCCACCAAGAGTGCTATGGAGCACGTGATGTACAAGAT TTTACAAATTGGGTCTGTCGAGCATGTGAATTGCCGAAACAAAAAAGAGAATGTTGTCTT TGTCCTGTCAAAGGCGGTGCTCTCAAGCCAACAGATATTGACCAACTATGGGTTCATGTT ACATGTGCCTGGTTTCAACCTAAAGTCTCTTTTCCTGTTGATGAGACAATGGAGCCAGCC ATGGGCATATTGAGCATCCCTTCAGAGTACTTTAAGAAGGCATGTGTTATATGCAAGCAG ATGCATGGTGCCTGCACTCAGTGCTACAAGTGCTCTACTTATTATCATGCAATGTGTGCA TCAAGAGCAGGATATCGCATGGAGTTGCAATACTCTGAAAAAAATGGAAGGAACATAACA AGAATGGTTTCCTACTGTGCATTTCACAGTACTCCTGACCCAGATAATGTCTTGATAGTT AAGACGCCTGAAGGAGTTTTCTCAACCAAATTTTTGCCCCAAAATAATGAGAAACAGAGT GGTACAAGACTTGTCAGGAAAGAGAATCTACAGGAGAAAGTCCTTCCTGCTAAAATTTCT GACTGTCCAGCTGCAAGGTGCCTACCTTATGAAATGCTGAAAAATAAGAAAGAACCAGGA GAGGCAATTGCCCACAGAATAATGGGACCCCGACATCATTCCCAAGAGTCAATTGAGGGT TTGAACGCTTGCATGGATCAAAAGGATGAAAAATCCTTCGCAACTTTTAGAGAACGACTT CGGTATTTACAGAAAATAGAAAACAAAAGGGTCTCTTGTGGTCGATCTGGAATACATGGA TGGGGACTCTTTGCTGCTAAGAAAATCCAGGAGGGGCAAATGGTTATCGAATATCGCGGT GACCAAGTTAGACGTAGTGTTGCAGATTTGAGGGAAGCACGATATCACAGGGAGAAGAAA GATTGTTATCTGTTCAAGATCAGCGAAGACGTTGTCGTTGATGCAACAGAGAAAGGGAAC ATAGCCCGCCTAATTAATCACTCGTGTATGCCTAATTGCTACGCAAGGATCATGAGTGTT GGCGATGAAAAGAGCCAGATAATTCTTATCGCCAAAAGAGACGTCTCCGCTGGCGAAGAA CTAACCTATGACTACTTGTTTGACCCTGACGAGTCCGAGGACTGCAGGGTCCCTTGTCTG TGTAAAGCTCTTAACTGCCGTGGATACATGAACTGA

Peptide Sequence

PEP ID	Os01t0218800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6507368:6514640:-1 gene:Os01g0218800 transcript:Os01t0218800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 1 description:Similar to Trithorax 5 (Fragment). (Os01t0218800-01);Similar to SET domain protein. (Os01t0218800-02)
Sequence	MLASRIPLKRCTAAAVVPLPGELEMEEGPTPPAGGGEGSGAAVVPAKRRRERVVPSRFRD SVVSLPLPPAKKGRPAKKAAAREGGDGEVYDVEVRAVEQQGATAAAFGAVETAVWPGDER PAQTEEELYRACRNIRRSSSSSGFSGSVVTSLSNAGGSVAPEGKPVVVVECKPKREGGDK KEDFYWPEDFVLGDVVWARSGKKCPAWPAVVIDPLLHAPAVVLNSCIPGALCVMFFGFSS GGHGRDYGWIKQGMIFPFVDYLDRFQGQALYKLKANRFRQAIEEAFLAERGFCELEMDEG CSLEKSVNDQSVPDGLQEGSGSNNDQECQSEAQVVGKSTGCCDSCGNRVPPKIAKKKKQA GEQLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIWVHVECDLTCINMEDLEN ADYFCPDCKSKRKTVPPVEQMNTPNSSECASTSKEKLPEMIPVFCFGMDGMYLPKKHMIL CQCNSCKERLMSLSEWERHTGSRKKNWKMSVKLKSNGDPLVTLLDDIPCANVKSSTPSIN KEELLKLLANSFRPVNARWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARDVQD FTNWVCRACELPKQKRECCLCPVKGGALKPTDIDQLWVHVTCAWFQPKVSFPVDETMEPA MGILSIPSEYFKKACVICKQMHGACTQCYKCSTYYHAMCASRAGYRMELQYSEKNGRNIT RMVSYCAFHSTPDPDNVLIVKTPEGVFSTKFLPQNNEKQSGTRLVRKENLQEKVLPAKIS DCPAARCLPYEMLKNKKEPGEAIAHRIMGPRHHSQESIEGLNACMDQKDEKSFATFRERL RYLQKIENKRVSCGRSGIHGWGLFAAKKIQEGQMVIEYRGDQVRRSVADLREARYHREKK DCYLFKISEDVVVDATEKGNIARLINHSCMPNCYARIMSVGDEKSQIILIAKRDVSAGEE LTYDYLFDPDESEDCRVPCLCKALNCRGYMN

Transcript Sequence

Transcript ID	Os01t0218800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6507368:6514640:-1 gene:Os01g0218800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 1 description:Similar to Trithorax 5 (Fragment). (Os01t0218800-01);Similar to SET domain protein. (Os01t0218800-02)
Sequence	GAACCCTAACACGCGGAGGATTTGGCCACCGACGAGTTGGGGGGAGGAAGGGAGTTCAAT TCTAGGGTTTTGTTTCGGCGCGGCGGGGATGCTCGCGTCCCGCATCCCGCTCAAGCGCTG CACCGCCGCCGCCGTCGTCCCCCTCCCCGGGGAGTTGGAGATGGAGGAGGGGCCCACCCC CCCCGCCGGGGGTGGTGAGGGGAGCGGCGCGGCGGTGGTGCCCGCCAAGCGCCGCCGCGA GCGGGTGGTCCCCTCGCGGTTTAGGGACTCGGTGGTGTCGCTGCCGCTGCCGCCCGCGAA GAAGGGGAGGCCCGCGAAGAAGGCGGCCGCGCGGGAGGGCGGGGACGGGGAGGTGTACGA TGTGGAGGTGCGCGCGGTGGAGCAACAAGGCGCGACGGCGGCGGCCTTCGGCGCCGTGGA GACCGCGGTGTGGCCCGGCGACGAGCGGCCGGCGCAGACGGAGGAGGAGCTGTACCGGGC GTGCAGGAATATCCGCAGGAGCAGCAGCTCCAGCGGGTTCAGCGGCAGCGTGGTGACGTC GCTGAGCAATGCCGGCGGGAGCGTGGCGCCGGAGGGGAAGCCCGTGGTGGTGGTGGAGTG CAAGCCGAAGAGGGAGGGCGGCGATAAAAAGGAGGATTTTTACTGGCCGGAGGATTTCGT GCTGGGTGATGTCGTGTGGGCGAGGTCCGGGAAGAAGTGCCCAGCATGGCCTGCGGTGGT GATTGACCCACTGCTCCACGCGCCAGCGGTCGTGTTGAACTCCTGCATCCCGGGTGCACT CTGCGTCATGTTCTTTGGATTCTCTTCTGGCGGGCATGGCAGGGACTATGGATGGATTAA GCAAGGGATGATCTTTCCATTTGTGGACTACTTAGACCGGTTTCAGGGTCAGGCTTTGTA TAAACTCAAGGCAAACAGATTCCGTCAAGCAATTGAGGAGGCTTTCCTTGCTGAGCGTGG GTTTTGTGAGCTCGAAATGGATGAGGGGTGCTCACTAGAGAAGTCTGTCAATGACCAGTC TGTCCCTGACGGGTTACAGGAAGGGAGTGGTTCTAACAATGACCAGGAATGTCAATCGGA GGCTCAGGTTGTTGGCAAATCAACTGGATGTTGTGATAGTTGTGGTAATCGTGTTCCACC CAAGATCGCGAAGAAAAAGAAGCAAGCGGGAGAGCAGTTACTCTGTAGACACTGTGATAA GCTATTGCAGTCAAAGCAGTACTGTGGCATATGCAAGAAAATCTGGCACCACACAGATGG TGGAAATTGGGTTTGTTGTGATGAGTGTCAAATTTGGGTTCACGTAGAATGTGACCTAAC ATGCATCAACATGGAGGACTTAGAAAATGCCGATTACTTCTGTCCAGATTGCAAATCAAA ACGCAAGACAGTACCTCCTGTTGAACAAATGAACACTCCGAACAGTTCAGAATGTGCTAG CACTTCTAAGGAAAAACTGCCGGAAATGATACCTGTGTTCTGCTTTGGGATGGACGGAAT GTATTTACCTAAGAAGCACATGATACTATGCCAATGTAATTCTTGCAAAGAAAGGCTGAT GAGTCTGAGTGAGTGGGAGAGACATACTGGTTCAAGGAAGAAGAACTGGAAGATGAGCGT TAAACTTAAGAGCAATGGGGATCCATTGGTAACCTTGTTGGATGATATTCCCTGCGCAAA TGTGAAGTCTTCTACACCAAGTATTAATAAAGAAGAGTTGCTGAAATTGCTAGCAAATTC TTTTAGACCTGTCAATGCTAGATGGACAACTGAACGTTGTGCTGTTTGTCGATGGGTTGA GGATTGGGACTACAATAAAATTATTATTTGCAACAGATGCCAAATAGCTGTCCACCAAGA GTGCTATGGAGCACGTGATGTACAAGATTTTACAAATTGGGTCTGTCGAGCATGTGAATT GCCGAAACAAAAAAGAGAATGTTGTCTTTGTCCTGTCAAAGGCGGTGCTCTCAAGCCAAC AGATATTGACCAACTATGGGTTCATGTTACATGTGCCTGGTTTCAACCTAAAGTCTCTTT TCCTGTTGATGAGACAATGGAGCCAGCCATGGGCATATTGAGCATCCCTTCAGAGTACTT TAAGAAGGCATGTGTTATATGCAAGCAGATGCATGGTGCCTGCACTCAGTGCTACAAGTG CTCTACTTATTATCATGCAATGTGTGCATCAAGAGCAGGATATCGCATGGAGTTGCAATA CTCTGAAAAAAATGGAAGGAACATAACAAGAATGGTTTCCTACTGTGCATTTCACAGTAC TCCTGACCCAGATAATGTCTTGATAGTTAAGACGCCTGAAGGAGTTTTCTCAACCAAATT TTTGCCCCAAAATAATGAGAAACAGAGTGGTACAAGACTTGTCAGGAAAGAGAATCTACA GGAGAAAGTCCTTCCTGCTAAAATTTCTGACTGTCCAGCTGCAAGGTGCCTACCTTATGA AATGCTGAAAAATAAGAAAGAACCAGGAGAGGCAATTGCCCACAGAATAATGGGACCCCG ACATCATTCCCAAGAGTCAATTGAGGGTTTGAACGCTTGCATGGATCAAAAGGATGAAAA ATCCTTCGCAACTTTTAGAGAACGACTTCGGTATTTACAGAAAATAGAAAACAAAAGGGT CTCTTGTGGTCGATCTGGAATACATGGATGGGGACTCTTTGCTGCTAAGAAAATCCAGGA GGGGCAAATGGTTATCGAATATCGCGGTGACCAAGTTAGACGTAGTGTTGCAGATTTGAG GGAAGCACGATATCACAGGGAGAAGAAAGATTGTTATCTGTTCAAGATCAGCGAAGACGT TGTCGTTGATGCAACAGAGAAAGGGAACATAGCCCGCCTAATTAATCACTCGTGTATGCC TAATTGCTACGCAAGGATCATGAGTGTTGGCGATGAAAAGAGCCAGATAATTCTTATCGC CAAAAGAGACGTCTCCGCTGGCGAAGAACTAACCTATGACTACTTGTTTGACCCTGACGA GTCCGAGGACTGCAGGGTCCCTTGTCTGTGTAAAGCTCTTAACTGCCGTGGATACATGAA CTGAAGTGAACATTCTCACAAGTCACAAGGCTAACCCCCCTTAACCATGCCAAAGGGCTA TATTCTCAGATTCATCATGATTCTTTCGTTTATTCAAAGGCTGGTTGTCAAACAAGCATC AAAGTTTGTGATTTTTTTACACAAATTTTGCTAGATAGCGAGGCTGGATTGGATTTACCG GTTTCAGACTTTCGGTGAGAGCATAGCAGGCACCTGGCAATTTAGCAACACGCTGCCAGA GCCCCTTGTAAATTCTTCTTACTTTGATGTAATAATAAGATGATTAAGTTGTTAATGCCT TTTCTCCATGATGAAAAGAAAGAGAAATGAATATCC