Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0218700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6500709:6507086:-1 gene:Os01g0218700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER D FAMILY MEMBER 1 description:ABC transporter integral membrane type 1 domain containing protein. (Os01t0218700-01);Similar to peroxisomal membrane ABC transporter family, PMP family. (Os01t0218700-02)
Sequence	ATGGGGTTACCTACTGCTGCTGCGCCCGCGTGCTGCTTCCCCTCCACTTCGTCGTCGTCC CCGCGGCTACTGCTCCTCCCGCTCCAACCACCACCACCACAGCCGCCGCGGCGACGGCGG CGGCTTGTTTCCCCCGGGGTTTGCTTCGGTTCTCCGCTGCCGCTGCACGCCCGCTTCCAC TGGCCCCACGCGGTGGCATCCTCCTCCATGCGCCGCCGCGGGCGGCGACGCAGGGCCACG GCCCCTCCCGCCGCGGCAGCCGCAGGGGAGGCCACCGGCGACGGCGGCGGCTCTGGTCCC GGCGCCGAGGATAAGAGAGTTGAAACGGACCTCAAAACACTTGCTAGAAGATTTTGGAAA GTTGCTGCCCCTTACTGGTGGTCAGAAGATAAAGTGCAAGCGAGGCTGAGGCTTGCTGCA GTATTTGCTCTTACATTAGCAACTACTGGAATTAGTGTTGGATTTAACTTTCTGGGTCGT GACTTCTACAATGCCCTTGCTGACAAGGACCAGGAACAATTTACCAAGCAACTGCTGTAT TACTTGGGAGGTTTTGCTGTAGGAATACCGTTCTTTGTCTTGAGAGACTATGCAAGGGAG ACCCTTTCTTTAAGATGGCGATCTTGGATGACAAGTTATTACATGAAGCGCTACTTTAAA AATAGAACTTTCTATAAGATTCAATCTCAATCACTAATTGATAACCCGGATCAACGGATC AATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATTTTCTCTGACATTTTTAAAT GCTGCCGTGGACTTGATATCATTCAGTAACATCCTTTATGGGATCTATCCACCATTATTC ATTGTTCTTATTGTCTACTCCCTTGGGGGCACTGGAATTAGTATCTTCCTTGGTAAAAAT TTGGTCAACTTGAACTTCATGCAAGAAAAGAAAGAAGCAGATTTTCGTTATGGACTTGTC CGAGTTAGAGAAAATGCTGAATCAATTGCTTTTTATGGCGGTGAAGAAAATGAATTGCAA CTTTTGTTGGATCGATTCAGGAGGGCTTTTGAAAACCTTAGCGAATTGCTAATAGCATCT CGTAATCTGGAGTTTTTCACCAATGGCTACCGTTATTTAATCCAGATCCTGCCAGCTGCA GTTGTTGCTCCGATGTACTTCTCAGGAAAAATTGAATTTGGAGTAATAAATCAATCAGTG TCTGCTTTCAATCATATCCTTAGTGATTTTTCTCTCATTGTGTTCCAGTTTCAGTCAATT AGTGCATTCTCGGCGGTTATTGATCGTCTAGGTGAATTTGATGATCTGTTGGATGGAAAT GGTTCATCTTTATCCAAGCCTGATAACATTGATGGGATCAACATAATTTTCAAGAGCACT GGTCCTACTGTACTGAGTTCCAATGGATCACCGACACAATCTAATCCATCCATGGTTCTT GAGATTTGTAATTTGACATTATTAACACCCAGGAGTGGAAACATTCTTATTACTGACCTC ACTATGGAACTCAAAGAAAAGGACCACCTACTGGTAATGGGGCCCAGTGGAAGTGGGAAA ACCTCTTTGTTACGTGCTTTGGCTGGCCTTTGGACCAGTGGTACTGGGGACATCATATAC CATGTGAGAGGTTCCATGGAGCTTCAAACATCAAATTCAGGTCCTGATGAGCCATCCAAC ATACAGTCAAACGGTGAAGAACTGCTACAAAGTTCAAAGCAGAGAAGGGATAATGGTATA TTCTTTGTTCCACAGAGACCATATATGGTTTTGGGAACCCTTCGTCAGCAATTGCTCTAT CCTACATGGACTGAAGATGTTTGTCATTCATCAAATAATGATCCTCAAAGTACAGACCCT CTTACCTTTGAAGTCTCCACATCAGATGGAGTTGGTTCCAAGTCTGAGATGCCCACAACT GATGAACTGATCAGAGTACTTGAGGCTGTTAAGTTAGGCTATATATTGCCTCGTTTCAAT GGTTTGGATTCTATGCATGATTGGGCCAGCGTTCTCTCTCTGGGGGAGCAACAGCGTCTT GCATTTGCTCGGTTGTTACTTGCAAAACCAACTTTAGTCCTCCTTGATGAGTCCACAAGT GCACTAGATGATATGAATGAGCGTCATCTATACAGTCAGATTGAAGCTGCAGGGATTACT TACATAAGCATTGGTCACCGGAAAACACTGCACAAGTTCCACAACAAGGTCTTGTACATT TCAAATTCCGATTCAACGGATAGCAACCCACGTAATTGGTACCTAAAGCCCACAGAACAG ATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAA

Peptide Sequence

PEP ID	Os01t0218700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6500709:6507086:-1 gene:Os01g0218700 transcript:Os01t0218700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER D FAMILY MEMBER 1 description:ABC transporter integral membrane type 1 domain containing protein. (Os01t0218700-01);Similar to peroxisomal membrane ABC transporter family, PMP family. (Os01t0218700-02)
Sequence	MGLPTAAAPACCFPSTSSSSPRLLLLPLQPPPPQPPRRRRRLVSPGVCFGSPLPLHARFH WPHAVASSSMRRRGRRRRATAPPAAAAAGEATGDGGGSGPGAEDKRVETDLKTLARRFWK VAAPYWWSEDKVQARLRLAAVFALTLATTGISVGFNFLGRDFYNALADKDQEQFTKQLLY YLGGFAVGIPFFVLRDYARETLSLRWRSWMTSYYMKRYFKNRTFYKIQSQSLIDNPDQRI NDDLSAFTGTALAFSLTFLNAAVDLISFSNILYGIYPPLFIVLIVYSLGGTGISIFLGKN LVNLNFMQEKKEADFRYGLVRVRENAESIAFYGGEENELQLLLDRFRRAFENLSELLIAS RNLEFFTNGYRYLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILSDFSLIVFQFQSI SAFSAVIDRLGEFDDLLDGNGSSLSKPDNIDGINIIFKSTGPTVLSSNGSPTQSNPSMVL EICNLTLLTPRSGNILITDLTMELKEKDHLLVMGPSGSGKTSLLRALAGLWTSGTGDIIY HVRGSMELQTSNSGPDEPSNIQSNGEELLQSSKQRRDNGIFFVPQRPYMVLGTLRQQLLY PTWTEDVCHSSNNDPQSTDPLTFEVSTSDGVGSKSEMPTTDELIRVLEAVKLGYILPRFN GLDSMHDWASVLSLGEQQRLAFARLLLAKPTLVLLDESTSALDDMNERHLYSQIEAAGIT YISIGHRKTLHKFHNKVLYISNSDSTDSNPRNWYLKPTEQMSIEESSSFAS

Transcript Sequence

Transcript ID	Os01t0218700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6500709:6507086:-1 gene:Os01g0218700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER D FAMILY MEMBER 1 description:ABC transporter integral membrane type 1 domain containing protein. (Os01t0218700-01);Similar to peroxisomal membrane ABC transporter family, PMP family. (Os01t0218700-02)
Sequence	GCTCGCCGCCATTGCTCGCCGCGGCGAGAGCACGCGAGGTCACGAGGAGGAGAAGAAAAA GCGGAATCGAGAAGCTACCAAACGCGAGCGGAGATGGGGTTACCTACTGCTGCTGCGCCC GCGTGCTGCTTCCCCTCCACTTCGTCGTCGTCCCCGCGGCTACTGCTCCTCCCGCTCCAA CCACCACCACCACAGCCGCCGCGGCGACGGCGGCGGCTTGTTTCCCCCGGGGTTTGCTTC GGTTCTCCGCTGCCGCTGCACGCCCGCTTCCACTGGCCCCACGCGGTGGCATCCTCCTCC ATGCGCCGCCGCGGGCGGCGACGCAGGGCCACGGCCCCTCCCGCCGCGGCAGCCGCAGGG GAGGCCACCGGCGACGGCGGCGGCTCTGGTCCCGGCGCCGAGGATAAGAGAGTTGAAACG GACCTCAAAACACTTGCTAGAAGATTTTGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAA GATAAAGTGCAAGCGAGGCTGAGGCTTGCTGCAGTATTTGCTCTTACATTAGCAACTACT GGAATTAGTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAATGCCCTTGCTGACAAG GACCAGGAACAATTTACCAAGCAACTGCTGTATTACTTGGGAGGTTTTGCTGTAGGAATA CCGTTCTTTGTCTTGAGAGACTATGCAAGGGAGACCCTTTCTTTAAGATGGCGATCTTGG ATGACAAGTTATTACATGAAGCGCTACTTTAAAAATAGAACTTTCTATAAGATTCAATCT CAATCACTAATTGATAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGA ACCGCGCTTGCATTTTCTCTGACATTTTTAAATGCTGCCGTGGACTTGATATCATTCAGT AACATCCTTTATGGGATCTATCCACCATTATTCATTGTTCTTATTGTCTACTCCCTTGGG GGCACTGGAATTAGTATCTTCCTTGGTAAAAATTTGGTCAACTTGAACTTCATGCAAGAA AAGAAAGAAGCAGATTTTCGTTATGGACTTGTCCGAGTTAGAGAAAATGCTGAATCAATT GCTTTTTATGGCGGTGAAGAAAATGAATTGCAACTTTTGTTGGATCGATTCAGGAGGGCT TTTGAAAACCTTAGCGAATTGCTAATAGCATCTCGTAATCTGGAGTTTTTCACCAATGGC TACCGTTATTTAATCCAGATCCTGCCAGCTGCAGTTGTTGCTCCGATGTACTTCTCAGGA AAAATTGAATTTGGAGTAATAAATCAATCAGTGTCTGCTTTCAATCATATCCTTAGTGAT TTTTCTCTCATTGTGTTCCAGTTTCAGTCAATTAGTGCATTCTCGGCGGTTATTGATCGT CTAGGTGAATTTGATGATCTGTTGGATGGAAATGGTTCATCTTTATCCAAGCCTGATAAC ATTGATGGGATCAACATAATTTTCAAGAGCACTGGTCCTACTGTACTGAGTTCCAATGGA TCACCGACACAATCTAATCCATCCATGGTTCTTGAGATTTGTAATTTGACATTATTAACA CCCAGGAGTGGAAACATTCTTATTACTGACCTCACTATGGAACTCAAAGAAAAGGACCAC CTACTGGTAATGGGGCCCAGTGGAAGTGGGAAAACCTCTTTGTTACGTGCTTTGGCTGGC CTTTGGACCAGTGGTACTGGGGACATCATATACCATGTGAGAGGTTCCATGGAGCTTCAA ACATCAAATTCAGGTCCTGATGAGCCATCCAACATACAGTCAAACGGTGAAGAACTGCTA CAAAGTTCAAAGCAGAGAAGGGATAATGGTATATTCTTTGTTCCACAGAGACCATATATG GTTTTGGGAACCCTTCGTCAGCAATTGCTCTATCCTACATGGACTGAAGATGTTTGTCAT TCATCAAATAATGATCCTCAAAGTACAGACCCTCTTACCTTTGAAGTCTCCACATCAGAT GGAGTTGGTTCCAAGTCTGAGATGCCCACAACTGATGAACTGATCAGAGTACTTGAGGCT GTTAAGTTAGGCTATATATTGCCTCGTTTCAATGGTTTGGATTCTATGCATGATTGGGCC AGCGTTCTCTCTCTGGGGGAGCAACAGCGTCTTGCATTTGCTCGGTTGTTACTTGCAAAA CCAACTTTAGTCCTCCTTGATGAGTCCACAAGTGCACTAGATGATATGAATGAGCGTCAT CTATACAGTCAGATTGAAGCTGCAGGGATTACTTACATAAGCATTGGTCACCGGAAAACA CTGCACAAGTTCCACAACAAGGTCTTGTACATTTCAAATTCCGATTCAACGGATAGCAAC CCACGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTT GCTTCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGAT TTCACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATT GTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCTAGTATGCTAC AAACCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCT GTTCTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCT CTGATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTT ATTACGTGTGTGGTGTGTCCTTGTAACTATACTGGGAATTACAGCTCTTATATACATGCA GTGTGTGCAGACTCCGACC